BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0026.p (351 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IT26.1 D8IT26_HERSS Nucleoside-diphosphate-sugar epimerase pro... 701 0.0 F1W3I8.1 F1W3I8_9BURK Polymyxin resistance protein ArnA-DH, UDP-... 677 0.0 D9SD24.1 D9SD24_GALCS NAD-dependent epimerase/dehydratase 637 0.0 D5CRM5.1 D5CRM5_SIDLE NAD-dependent epimerase/dehydratase 632 e-179 Q3JRK4.1 Q3JRK4_BURP1 PbgP3 protein 602 e-170 >D8IT26.1 D8IT26_HERSS Nucleoside-diphosphate-sugar epimerase protein Length = 351 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/351 (94%), Positives = 341/351 (97%) Query: 1 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDIT 60 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDIT Sbjct: 1 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDIT 60 Query: 61 INKEWVEYHVKKCDVILPLVAIATPSTYVNKPLRVFELDFEANLPIVRAAAKYGKHLVFP 120 IN+EWVEYHVKKCDVILPLVAIATPSTYVN PLRVFELDFEANLPIVR+AAKY KHLVFP Sbjct: 61 INQEWVEYHVKKCDVILPLVAIATPSTYVNAPLRVFELDFEANLPIVRSAAKYKKHLVFP 120 Query: 121 STSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGMEDNLNFTLFRP 180 STSEVYGMCHD+EFDPEESELICGPINKPRWIYSC+KQLMDRVIWGYGME LNFTLFRP Sbjct: 121 STSEVYGMCHDEEFDPEESELICGPINKPRWIYSCAKQLMDRVIWGYGMEAGLNFTLFRP 180 Query: 181 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQKRAFTYIDDGIDALMKI 240 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGG QKRAFTYIDDGIDALMKI Sbjct: 181 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGLQKRAFTYIDDGIDALMKI 240 Query: 241 IANEGGVATGKIYNIGNPVNNYSIRDLADMMLKLATEYPEYADSAKQVKLVETTSTAYYG 300 IANEGGVA+GKIYNIGNPVNNYSI++LADMMLKLA EYPEYA++AKQVKLVETTS AYYG Sbjct: 241 IANEGGVASGKIYNIGNPVNNYSIKELADMMLKLAAEYPEYAETAKQVKLVETTSAAYYG 300 Query: 301 KGYQDVQNRVPKITNTCEELNWKPTFTMADTLRNIFDAYRGQVAEARALVD 351 KGYQDVQNRVPKITNTCEELNW PT TMADTLRNIFDAYR QVAEARAL+D Sbjct: 301 KGYQDVQNRVPKITNTCEELNWAPTTTMADTLRNIFDAYRSQVAEARALMD 351 >F1W3I8.1 F1W3I8_9BURK Polymyxin resistance protein ArnA-DH, UDP-glucuronic acid decarboxylase Length = 350 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/351 (91%), Positives = 337/351 (96%), Gaps = 1/351 (0%) Query: 1 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDIT 60 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMM+DRIT++L+N +KSRMHFFEGDIT Sbjct: 1 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMSDRITELLDNPDFKSRMHFFEGDIT 60 Query: 61 INKEWVEYHVKKCDVILPLVAIATPSTYVNKPLRVFELDFEANLPIVRAAAKYGKHLVFP 120 INKEWVEYHVKKCDVILPLVAIATPSTYV +PLRVFELDFEANLPIVR+AAKYGKHLVFP Sbjct: 61 INKEWVEYHVKKCDVILPLVAIATPSTYVKQPLRVFELDFEANLPIVRSAAKYGKHLVFP 120 Query: 121 STSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGMEDNLNFTLFRP 180 STSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGME LNFTLFRP Sbjct: 121 STSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGME-GLNFTLFRP 179 Query: 181 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQKRAFTYIDDGIDALMKI 240 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGG+QKRAFTYIDDGIDAL+KI Sbjct: 180 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGEQKRAFTYIDDGIDALIKI 239 Query: 241 IANEGGVATGKIYNIGNPVNNYSIRDLADMMLKLATEYPEYADSAKQVKLVETTSTAYYG 300 IAN+ G+ATGKIYNIGNPVNNYSIRDLA MML LA +YPEYADSAK+V+L+ETTS AYYG Sbjct: 240 IANKDGIATGKIYNIGNPVNNYSIRDLAAMMLTLAADYPEYADSAKKVELIETTSAAYYG 299 Query: 301 KGYQDVQNRVPKITNTCEELNWKPTFTMADTLRNIFDAYRGQVAEARALVD 351 KGYQDVQNRVPKITNTCEELNW PT TM DTLRNIFDAYRGQVA ARAL+D Sbjct: 300 KGYQDVQNRVPKITNTCEELNWNPTTTMPDTLRNIFDAYRGQVAAARALMD 350 >D9SD24.1 D9SD24_GALCS NAD-dependent epimerase/dehydratase Length = 346 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/351 (86%), Positives = 322/351 (91%), Gaps = 5/351 (1%) Query: 1 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDIT 60 MKKVLILGVNGFIGHHLS +IL TTDW VYGMDM ++RI D++ +E R HFFEGDIT Sbjct: 1 MKKVLILGVNGFIGHHLSNKILATTDWEVYGMDMSSERIADLIGHE----RFHFFEGDIT 56 Query: 61 INKEWVEYHVKKCDVILPLVAIATPSTYVNKPLRVFELDFEANLPIVRAAAKYGKHLVFP 120 INKEWVEYHVKKCDVILPLVAIATPSTYV +PLRVFELDFEANLPIVRAA KYGKHLVFP Sbjct: 57 INKEWVEYHVKKCDVILPLVAIATPSTYVKQPLRVFELDFEANLPIVRAAVKYGKHLVFP 116 Query: 121 STSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGMEDNLNFTLFRP 180 STSEVYGMCHD+EFDP ESELICGPINKPRWIYSCSKQLMDRVIWGYGME LNFTLFRP Sbjct: 117 STSEVYGMCHDEEFDPAESELICGPINKPRWIYSCSKQLMDRVIWGYGME-GLNFTLFRP 175 Query: 181 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQKRAFTYIDDGIDALMKI 240 FNWIGAGLDSIHTPKEGSSRVVTQF GHIVRGENISLVDGGQQKRAFTY+DDGI+ALMKI Sbjct: 176 FNWIGAGLDSIHTPKEGSSRVVTQFLGHIVRGENISLVDGGQQKRAFTYVDDGINALMKI 235 Query: 241 IANEGGVATGKIYNIGNPVNNYSIRDLADMMLKLATEYPEYADSAKQVKLVETTSTAYYG 300 I N+ GVATGKIYNIGNPVNN+SI+DLADMMLKLA EYPEY +SA++VK++ETT+ AYYG Sbjct: 236 IENKDGVATGKIYNIGNPVNNFSIKDLADMMLKLANEYPEYRESAQKVKILETTAAAYYG 295 Query: 301 KGYQDVQNRVPKITNTCEELNWKPTFTMADTLRNIFDAYRGQVAEARALVD 351 KGYQDVQNRVPKITNTCEEL W P MADTLRNIFDAYRGQV EAR L+D Sbjct: 296 KGYQDVQNRVPKITNTCEELGWAPVINMADTLRNIFDAYRGQVGEARKLMD 346 >D5CRM5.1 D5CRM5_SIDLE NAD-dependent epimerase/dehydratase Length = 347 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 301/351 (85%), Positives = 318/351 (90%), Gaps = 4/351 (1%) Query: 1 MKKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDIT 60 MKKVLILGVNGFIGHHLS RIL TTDW VYGMDM TDRI+D++ K R HFFEGDIT Sbjct: 1 MKKVLILGVNGFIGHHLSNRILATTDWEVYGMDMSTDRISDLIG----KPRFHFFEGDIT 56 Query: 61 INKEWVEYHVKKCDVILPLVAIATPSTYVNKPLRVFELDFEANLPIVRAAAKYGKHLVFP 120 INKEWVEYHVKKCDVILPLVAIATP+TYV +PLRVFELDFEANLPIVRA KY KHLVFP Sbjct: 57 INKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRACVKYNKHLVFP 116 Query: 121 STSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGMEDNLNFTLFRP 180 STSEVYGMCHD+EFDP+ SELICGPINKPRWIYS SKQLMDRVIWGYGM+DNLNFTLFRP Sbjct: 117 STSEVYGMCHDEEFDPDNSELICGPINKPRWIYSNSKQLMDRVIWGYGMQDNLNFTLFRP 176 Query: 181 FNWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQKRAFTYIDDGIDALMKI 240 FNWIGAGLDSI+TPKEGSSRVVTQF GHI+RG NISLVDGG QKRAFTYIDDGIDALMKI Sbjct: 177 FNWIGAGLDSINTPKEGSSRVVTQFLGHIIRGNNISLVDGGHQKRAFTYIDDGIDALMKI 236 Query: 241 IANEGGVATGKIYNIGNPVNNYSIRDLADMMLKLATEYPEYADSAKQVKLVETTSTAYYG 300 I N+ G+ATGKIYNIGNP NN+SIRDLADMMLKLA EYPEY DSAK VK+VETTS AYYG Sbjct: 237 IDNKNGIATGKIYNIGNPSNNHSIRDLADMMLKLANEYPEYKDSAKNVKIVETTSDAYYG 296 Query: 301 KGYQDVQNRVPKITNTCEELNWKPTFTMADTLRNIFDAYRGQVAEARALVD 351 KGYQDVQNRVPKITNTCEEL WKPT TM DTLR I+DAYR Q+AEA+ LVD Sbjct: 297 KGYQDVQNRVPKITNTCEELGWKPTTTMPDTLRKIYDAYRTQIAEAKGLVD 347 >Q3JRK4.1 Q3JRK4_BURP1 PbgP3 protein Length = 351 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 286/350 (81%), Positives = 312/350 (89%), Gaps = 5/350 (1%) Query: 2 KKVLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKSRMHFFEGDITI 61 KKVLILGVNGFIGHHLSKRILETTDW V+GMDM TDR+ D++++E RMHFFEGDITI Sbjct: 4 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE----RMHFFEGDITI 59 Query: 62 NKEWVEYHVKKCDVILPLVAIATPSTYVNKPLRVFELDFEANLPIVRAAAKYGKHLVFPS 121 NKEWVEYHVKKCDVILPLVAIATP+TYV +PLRVFELDFEANLPIVR+A KYGKHLVFPS Sbjct: 60 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 119 Query: 122 TSEVYGMCHDDEFDPEESELICGPINKPRWIYSCSKQLMDRVIWGYGMEDNLNFTLFRPF 181 TSEVYGMC D++FDP+ S L GPINKPRWIY+CSKQLMDRVIWGYGME LNFTLFRPF Sbjct: 120 TSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPF 178 Query: 182 NWIGAGLDSIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQKRAFTYIDDGIDALMKII 241 NWIG GLDSI+TPKEGSSRVVTQF GHIVRGENISLVDGG QKRAFTY+DDGI ALMKII Sbjct: 179 NWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKII 238 Query: 242 ANEGGVATGKIYNIGNPVNNYSIRDLADMMLKLATEYPEYADSAKQVKLVETTSTAYYGK 301 N GVATGKIYNIGNP NN+S+R+LA+ ML+LA E+PEYADSAK+VKLVETTS AYYG Sbjct: 239 ENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGN 298 Query: 302 GYQDVQNRVPKITNTCEELNWKPTFTMADTLRNIFDAYRGQVAEARALVD 351 GYQDVQNRVPKI NT +EL W P FT D LR IF+AYRG VA+ARALV+ Sbjct: 299 GYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADARALVE 348