BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0004.p         (64 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J0F8.1 D8J0F8_HERSS 2-C-methyl-D-erythritol 4-phosphate cytidy...    98   5e-19
A6SXV2.1 A6SXV2_JANMA 2-C-methyl-D-erythritol 4-phosphate cytidy...    87   8e-16
F1W558.1 F1W558_9BURK 2-C-methyl-D-erythritol 4-phosphate cytidy...    77   6e-13
A4G6C5.1 A4G6C5_HERAR 2-C-methyl-D-erythritol 4-phosphate cytidy...    74   6e-12
E1MRD2.1 E1MRD2_9GAMM 2-C-methyl-D-erythritol 4-phosphate cytidy...    73   2e-11

>D8J0F8.1 D8J0F8_HERSS 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase EC=2.7.7.60
          Length = 254

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 52/63 (82%)

Query: 1   MFRYGLLTRALEQAHAQNRVGDITDDASAVEMLGLQPKLVEGSPRNFKVTLAHDVALAEL 60
           MF Y LL RAL QA  Q R+G+ITDDASA+EMLGL+P+LVEGSPRN KVTLA D ALAE 
Sbjct: 188 MFPYALLHRALRQAQEQGRLGEITDDASAIEMLGLRPRLVEGSPRNLKVTLAQDAALAEF 247

Query: 61  FLK 63
           FLK
Sbjct: 248 FLK 250


>A6SXV2.1 A6SXV2_JANMA 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase EC=2.7.7.60
          Length = 235

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 50/63 (79%), Gaps = 6/63 (9%)

Query: 1   MFRYGLLTRALEQAHAQNRVGDITDDASAVEMLGLQPKLVEGSPRNFKVTLAHDVALAEL 60
           MFRYGLL +ALEQA A      +TD+ASA+E  GLQPKLVEG  RNFKVTL HDVALAEL
Sbjct: 176 MFRYGLLRKALEQATA------VTDEASAIEAQGLQPKLVEGDARNFKVTLPHDVALAEL 229

Query: 61  FLK 63
           +LK
Sbjct: 230 YLK 232


>F1W558.1 F1W558_9BURK 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase
          Length = 139

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 46/63 (73%), Gaps = 6/63 (9%)

Query: 1   MFRYGLLTRALEQAHAQNRVGDITDDASAVEMLGLQPKLVEGSPRNFKVTLAHDVALAEL 60
           MFR+GLL RALEQA       ++TD+ASA+E LGLQP LV GS RNFKVTLA D ALA L
Sbjct: 80  MFRHGLLVRALEQAQ------EVTDEASAIEALGLQPLLVPGSTRNFKVTLAEDAALATL 133

Query: 61  FLK 63
            L 
Sbjct: 134 ILN 136


>A4G6C5.1 A4G6C5_HERAR 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase EC=2.7.7.60
          Length = 232

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 6/63 (9%)

Query: 1   MFRYGLLTRALEQAHAQNRVGDITDDASAVEMLGLQPKLVEGSPRNFKVTLAHDVALAEL 60
           MF YGLL +ALEQA A      +TD+A A+E LGL+PKLV G   NFKVTL  DVALAEL
Sbjct: 173 MFPYGLLKKALEQAAA------VTDEAGAIEALGLKPKLVTGHACNFKVTLPEDVALAEL 226

Query: 61  FLK 63
           +LK
Sbjct: 227 YLK 229


>E1MRD2.1 E1MRD2_9GAMM 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase EC=2.7.7.60
          Length = 230

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 3/63 (4%)

Query: 1   MFRYGLLTRALEQAHAQNRVGDITDDASAVEMLGLQPKLVEGSPRNFKVTLAHDVALAEL 60
           MFRYG+L  ALEQA        ITDDASA+E+ GLQPK+VEG P N K+T   D+ALA+ 
Sbjct: 169 MFRYGMLKTALEQAQGNPA---ITDDASALELQGLQPKIVEGRPDNIKITRPEDLALAQF 225

Query: 61  FLK 63
           +++
Sbjct: 226 YME 228