BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0014.p (527 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6SZ00.1 A6SZ00_JANMA ABC-type branched-chain amino acid transpo... 941 0.0 D8IY58.1 D8IY58_HERSS ABC-type urea transport system, permease c... 916 0.0 D4XI38.1 D4XI38_9BURK Branched-chain amino acid ABC superfamily ... 634 e-179 E3HST4.1 E3HST4_ACHXA Urea ABC transporter, permease protein UrtB 2 614 e-174 A9HXY5.1 A9HXY5_BORPD Branched-chain amino acid transport system... 581 e-163 >A6SZ00.1 A6SZ00_JANMA ABC-type branched-chain amino acid transport system permease protein Length = 538 Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/527 (90%), Positives = 500/527 (94%) Query: 1 LLTGWLCTQAISAHAAIDPALLKPLAGDDPDARIAAVTQIAALANADAQKILNAINSDAL 60 +L+ WLCTQAISAHAAIDPALLKPLAGDDPDARIAAVT+IAALAN DAQKIL AIN+DAL Sbjct: 12 MLSLWLCTQAISAHAAIDPALLKPLAGDDPDARIAAVTEIAALANQDAQKILQAINNDAL 71 Query: 61 YATPAGDVLIIEDSDAFNPATDKTGPAPDDAEGITVNNRLRGVVEGALSGLKLFSPDRAT 120 YATPAGDV II+ SDAFNPATDKTGPAPDDAEGITVNNRLRG VEGALSGL+LF+ DR Sbjct: 72 YATPAGDVFIIDGSDAFNPATDKTGPAPDDAEGITVNNRLRGAVEGALSGLQLFAQDRNA 131 Query: 121 RLTAATELLKTADAAQTPLISKALAAEKDPQIQEVLKQVVATANLHAPDAATRKAAVKAL 180 RLTAA +LLKTAD AQ PLI+KAL E DP I+E+L+QVVATANLHAPDAATR+AAVK L Sbjct: 132 RLTAANDLLKTADPAQIPLINKALEKESDPAIRELLQQVVATANLHAPDAATRQAAVKTL 191 Query: 181 AETTNASLKPVLEQMLAKNPDGSYVEADEGVRIEAVRTVSALDRHLTITEFVGKLFYGVS 240 A T+NASLKP+LEQMLAKNPDGSYVE D GVR EAV T+SAL+RHLTITEFVGKLFYG+S Sbjct: 192 ANTSNASLKPILEQMLAKNPDGSYVEPDAGVRSEAVNTLSALNRHLTITEFVGKLFYGIS 251 Query: 241 LGSVLLLAALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYIVVAL 300 LGSVLLLAALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFP AIDAY++VAL Sbjct: 252 LGSVLLLAALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPEAIDAYLLVAL 311 Query: 301 PAAFIVAAAVGIALERLVIRWLYGRPLETLLCTWGISLMLMQAVRSIFGAQNVEVANPSW 360 PAAFIVAAAVGIALERLVIRWLYGRPLETLLCTWGISL+LMQ VRSIFGAQNVEVANPSW Sbjct: 312 PAAFIVAAAVGIALERLVIRWLYGRPLETLLCTWGISLILMQGVRSIFGAQNVEVANPSW 371 Query: 361 MSGGITVLGSLVLSYNRIVIIFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGVS 420 MSGG+TVLGSLVLSYNRIVIIFFALFVV AVWLILNKTRLGLFVRAV QNRRMA CVGVS Sbjct: 372 MSGGVTVLGSLVLSYNRIVIIFFALFVVLAVWLILNKTRLGLFVRAVMQNRRMAACVGVS 431 Query: 421 TGKIDMMTFGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAA 480 TGKIDMMTFGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAA Sbjct: 432 TGKIDMMTFGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAA 491 Query: 481 FGLGEVNKFLEPVAGAVLAKIAILVFIIVFIQKRPQGLFALKGRSVE 527 FGLGEVNKFLEPVAGAVLAKIAILVFII+FIQKRPQGLFALKGRSVE Sbjct: 492 FGLGEVNKFLEPVAGAVLAKIAILVFIIIFIQKRPQGLFALKGRSVE 538 >D8IY58.1 D8IY58_HERSS ABC-type urea transport system, permease component protein Length = 538 Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/528 (88%), Positives = 490/528 (92%), Gaps = 1/528 (0%) Query: 1 LLTGWLCTQAISAHAAIDPALLKPLAGDDPDARIAAVTQIAALANADAQKILNAINSDAL 60 LL WLC A++A AAIDPALLKPL GDDPDARI AV QIAALAN DA KILNA+NSDAL Sbjct: 11 LLATWLCVHALAASAAIDPALLKPLGGDDPDARIDAVNQIAALANDDALKILNALNSDAL 70 Query: 61 YATPAGDVLIIEDS-DAFNPATDKTGPAPDDAEGITVNNRLRGVVEGALSGLKLFSPDRA 119 Y TPAGDVLI++++ AFNPATDK+GPAPDDAEGITVNNRLRG V+GALSGLKL SP R Sbjct: 71 YVTPAGDVLIVDEAGQAFNPATDKSGPAPDDAEGITVNNRLRGAVDGALSGLKLLSPQRE 130 Query: 120 TRLTAATELLKTADAAQTPLISKALAAEKDPQIQEVLKQVVATANLHAPDAATRKAAVKA 179 RL AA ELLK AD AQ PLI KALA E D QI++VL+QV ATANLH+PD A R+AAVK Sbjct: 131 QRLAAANELLKNADPAQIPLIVKALAKESDAQIKDVLQQVQATANLHSPDPAARRAAVKT 190 Query: 180 LAETTNASLKPVLEQMLAKNPDGSYVEADEGVRIEAVRTVSALDRHLTITEFVGKLFYGV 239 LA+TTNASLKP LE MLAK+PDGSYVE DEGVR+EAVRT++ALDRHL I +F GKLFYGV Sbjct: 191 LADTTNASLKPALENMLAKHPDGSYVEPDEGVRVEAVRTLAALDRHLAIVDFAGKLFYGV 250 Query: 240 SLGSVLLLAALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYIVVA 299 SLGSVLLLAALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAY+VVA Sbjct: 251 SLGSVLLLAALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYLVVA 310 Query: 300 LPAAFIVAAAVGIALERLVIRWLYGRPLETLLCTWGISLMLMQAVRSIFGAQNVEVANPS 359 LPAAFIVAAAVGIALERLVIRWLYGRPLETLLCTWGISLMLMQ VRSIFGAQNVEVANPS Sbjct: 311 LPAAFIVAAAVGIALERLVIRWLYGRPLETLLCTWGISLMLMQGVRSIFGAQNVEVANPS 370 Query: 360 WMSGGITVLGSLVLSYNRIVIIFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGV 419 WMSGG+TVLGSLVLSYNRIVI+FFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGV Sbjct: 371 WMSGGVTVLGSLVLSYNRIVIVFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGV 430 Query: 420 STGKIDMMTFGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIA 479 STGKIDMMTFGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIA Sbjct: 431 STGKIDMMTFGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIA 490 Query: 480 AFGLGEVNKFLEPVAGAVLAKIAILVFIIVFIQKRPQGLFALKGRSVE 527 AFGLGEVNKFLEP+AGAVLAKIAILVFIIVFIQKRPQGLFALKGRSVE Sbjct: 491 AFGLGEVNKFLEPMAGAVLAKIAILVFIIVFIQKRPQGLFALKGRSVE 538 >D4XI38.1 D4XI38_9BURK Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease Length = 543 Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust. Identities = 332/519 (63%), Positives = 395/519 (76%), Gaps = 2/519 (0%) Query: 10 AISAHAAIDPALLKPLAGDDPDARIAAVTQIAALANADAQKILNAINSDALYATPAGDVL 69 A +A A +DPALL PLAGDD DA++ A+ + L A +L A+ +D LYAT G VL Sbjct: 26 AQAAAAGVDPALLAPLAGDDTDAKLQAIAALGQLPEPAAAAVLQALGNDQLYATADGRVL 85 Query: 70 I-IEDSDAFNPATDKTGPAPDDAEGITVNNRLRGVVEGALSGLKLFSPDRATRLTAATEL 128 I ++D+ A +P T P + +T+NNRLR +E AL+G +LFS RL AA L Sbjct: 86 IGVDDTHATDPVTGAAVDLPAGSGTVTINNRLRRAIEAALAGSRLFSDKPGERLDAARRL 145 Query: 129 LKTADAAQTPLISKALAAEKDPQIQEVLKQVVATANLHAPDAATRKAAVKALAETTNASL 188 +T D A+ P++ KALA+EK+ +++ L+ A L + D A R+ AV+ L +T NA+ Sbjct: 146 QQTGDPARLPMLEKALASEKNEAVRDALRIAQANLELKSSDPAKRRHAVELLGDTRNAAF 205 Query: 189 KPVLEQMLAKNPDGSYVEADEGVRIEAVRTVSALDRHLTITEFVGKLFYGVSLGSVLLLA 248 +P L L + DG+Y+E D VR A + +DRHL E+ G LFYGVSLGSVLLLA Sbjct: 206 RPTLAA-LTQQRDGAYLEPDASVREAAATALKQIDRHLATIEWAGNLFYGVSLGSVLLLA 264 Query: 249 ALGLAITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYIVVALPAAFIVAA 308 ALGLAITFGLMG+INMAHGELLMIGAY TYV Q +FR + P +D Y+V ALP AF+V A Sbjct: 265 ALGLAITFGLMGVINMAHGELLMIGAYVTYVVQTLFRAWLPAWLDWYVVAALPLAFVVTA 324 Query: 309 AVGIALERLVIRWLYGRPLETLLCTWGISLMLMQAVRSIFGAQNVEVANPSWMSGGITVL 368 VG+ALER VIRWLYGRPLETLL TWGISLMLMQ VR++FGAQNVEV NPSWMSGGITVL Sbjct: 325 LVGMALERTVIRWLYGRPLETLLATWGISLMLMQGVRTLFGAQNVEVGNPSWMSGGITVL 384 Query: 369 GSLVLSYNRIVIIFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGVSTGKIDMMT 428 G LVL+YNR+VII FA FVVF VW++LN TRLGLFVRA+TQNRRMADCVGV TG+IDM+ Sbjct: 385 GGLVLTYNRLVIIGFAFFVVFLVWVLLNHTRLGLFVRAITQNRRMADCVGVPTGRIDMLA 444 Query: 429 FGLGCGIAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNK 488 FGLG GIAGL GVALSQLGNVGPDLG+GYIVDSFMVVVLGGVGQLAGTVIAA GLG VNK Sbjct: 445 FGLGSGIAGLAGVALSQLGNVGPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNK 504 Query: 489 FLEPVAGAVLAKIAILVFIIVFIQKRPQGLFALKGRSVE 527 FLEP AGAV+AKI ILV I++F+QKRPQGLFA +GRSVE Sbjct: 505 FLEPYAGAVMAKITILVLIVLFVQKRPQGLFAPRGRSVE 543 >E3HST4.1 E3HST4_ACHXA Urea ABC transporter, permease protein UrtB 2 Length = 543 Score = 614 bits (1584), Expect = e-174, Method: Compositional matrix adjust. Identities = 325/512 (63%), Positives = 380/512 (74%), Gaps = 2/512 (0%) Query: 17 IDPALLKPLAGDDPDARIAAVTQIAALANADAQKILNAINSDALYATPAGDVLIIEDSDA 76 +DPALL PLAGDD DA++ + + L +A +L A+ D LYA P G VLI Sbjct: 33 VDPALLAPLAGDDTDAKLQTIAALGQLPEPEAAAVLQALGEDRLYAAPDGRVLIGNGGAR 92 Query: 77 FNPATDKTGPA-PDDAEGITVNNRLRGVVEGALSGLKLFSPDRATRLTAATELLKTADAA 135 A P DA I +NNRLR +E AL+G +L+S A RL AA L +T D A Sbjct: 93 ATDAATGAAAELPADAGAIGINNRLRRAIEAALAGSRLYSEQPAERLAAARRLQQTGDPA 152 Query: 136 QTPLISKALAAEKDPQIQEVLKQVVATANLHAPDAATRKAAVKALAETTNASLKPVLEQM 195 + P++ KALAAEK+ +++ L A L + D A R+ AV+ L T +A+ +P L Sbjct: 153 RLPMLEKALAAEKNEAVRDALLIAQANLELKSSDPAKRRHAVELLGGTRSAAFRPTLAA- 211 Query: 196 LAKNPDGSYVEADEGVRIEAVRTVSALDRHLTITEFVGKLFYGVSLGSVLLLAALGLAIT 255 LA+ DG+Y E D GVR A R + +DRHLT E+ G LFYG+SLGSVLLLAALGLAIT Sbjct: 212 LAEERDGAYAEPDAGVREAAGRALKQIDRHLTTIEWAGNLFYGISLGSVLLLAALGLAIT 271 Query: 256 FGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYIVVALPAAFIVAAAVGIALE 315 FGLMG+INMAHGELLMIGAY TYV Q FR + PG +D Y++ ALP AF V A VG+ALE Sbjct: 272 FGLMGVINMAHGELLMIGAYVTYVVQTAFRAWLPGWLDWYVLAALPLAFAVTALVGMALE 331 Query: 316 RLVIRWLYGRPLETLLCTWGISLMLMQAVRSIFGAQNVEVANPSWMSGGITVLGSLVLSY 375 R VIRWLYGRPLETLL TWGISL+LMQ VR++FGAQNVEV NP WMSGG+TVLG LVLSY Sbjct: 332 RTVIRWLYGRPLETLLATWGISLILMQGVRTLFGAQNVEVGNPGWMSGGVTVLGGLVLSY 391 Query: 376 NRIVIIFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGVSTGKIDMMTFGLGCGI 435 NR+VII FA FVVF VW +LN TRLGLFVRA+TQNRRMADCVGV TG++DM+ FGLG GI Sbjct: 392 NRLVIIGFAFFVVFLVWALLNHTRLGLFVRAITQNRRMADCVGVPTGRVDMLAFGLGSGI 451 Query: 436 AGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNKFLEPVAG 495 AGL GVALSQLGNVGPDLG+GYIVDSFMVVVLGGVGQLAGTVIAA GLG VNKFLEP G Sbjct: 452 AGLAGVALSQLGNVGPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKFLEPYTG 511 Query: 496 AVLAKIAILVFIIVFIQKRPQGLFALKGRSVE 527 AV+AKI IL I++F+QKRPQGLFA +GRSVE Sbjct: 512 AVMAKITILALIVLFVQKRPQGLFAPRGRSVE 543 >A9HXY5.1 A9HXY5_BORPD Branched-chain amino acid transport system, permease component Length = 541 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 320/513 (62%), Positives = 384/513 (74%) Query: 15 AAIDPALLKPLAGDDPDARIAAVTQIAALANADAQKILNAINSDALYATPAGDVLIIEDS 74 A +DPALL PLA DD R+ A+ ++ A +L A+ SD LYA P G +LI + Sbjct: 29 AGLDPALLAPLADDDTGVRLEAIARLGLEPTPQAAAVLEALGSDRLYAAPDGRLLIDTGA 88 Query: 75 DAFNPATDKTGPAPDDAEGITVNNRLRGVVEGALSGLKLFSPDRATRLTAATELLKTADA 134 A + AT + P +A ++VNNRLR + AL+ +L +PD A RL AA L + DA Sbjct: 89 GAVDAATGQPAALPPEAGTVSVNNRLRRAIAAALAASRLHAPDAAQRLAAAKRLQRGTDA 148 Query: 135 AQTPLISKALAAEKDPQIQEVLKQVVATANLHAPDAATRKAAVKALAETTNASLKPVLEQ 194 P++ KAL+ E+D +++ L+ VAT L + D R+ A K L + NA+ +PVLE Sbjct: 149 TALPMLEKALSEERDGEVRAALEIAVATLQLQSDDPGVRRQAAKTLGHSGNAAFRPVLEA 208 Query: 195 MLAKNPDGSYVEADEGVRIEAVRTVSALDRHLTITEFVGKLFYGVSLGSVLLLAALGLAI 254 ML ++ G Y E D VR A + +++RHL +VG LFYGVSLGSVLLLAALGLAI Sbjct: 209 MLQQDAQGRYAEPDAQVRAAAGAALHSIERHLATVAWVGNLFYGVSLGSVLLLAALGLAI 268 Query: 255 TFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYIVVALPAAFIVAAAVGIAL 314 TFGLMG+INMAHGELLMIGAY TY Q +FR +FP +DAY++ ALPAAF+V A VG+AL Sbjct: 269 TFGLMGVINMAHGELLMIGAYVTYAVQALFRLWFPQWLDAYVIAALPAAFVVTALVGMAL 328 Query: 315 ERLVIRWLYGRPLETLLCTWGISLMLMQAVRSIFGAQNVEVANPSWMSGGITVLGSLVLS 374 ER VIRWLYGRPLETLL TWGISLMLMQAVR++FGAQNVEV NPSWMSGGITVLG+LVLS Sbjct: 329 ERTVIRWLYGRPLETLLATWGISLMLMQAVRTLFGAQNVEVGNPSWMSGGITVLGNLVLS 388 Query: 375 YNRIVIIFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGVSTGKIDMMTFGLGCG 434 YNRI I+ FA+ VV VWL+LN TRLGLFVRA+TQNRRMADCVGV TG+IDM+ FGLG G Sbjct: 389 YNRIAIVAFAVLVVVFVWLLLNHTRLGLFVRAITQNRRMADCVGVPTGRIDMLAFGLGSG 448 Query: 435 IAGLGGVALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNKFLEPVA 494 IAGL GVALSQLGNVGPDLG+ YIVDSFMVVVLGGVGQLAGTV+AA GLG V KFLEP + Sbjct: 449 IAGLAGVALSQLGNVGPDLGRAYIVDSFMVVVLGGVGQLAGTVVAALGLGAVTKFLEPYS 508 Query: 495 GAVLAKIAILVFIIVFIQKRPQGLFALKGRSVE 527 GAV+AKI IL I++F+QKRPQGLFA +GRS E Sbjct: 509 GAVMAKITILALIVLFVQKRPQGLFAPRGRSAE 541