BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0028.p (188 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPW4.1 D8IPW4_HERSS ABC-type amino-acid transport system, peri... 319 1e-85 Q0K085.1 Q0K085_CUPNH ABC-type transporter, periplasmic componen... 265 2e-69 Q125C2.1 Q125C2_POLSJ Amino acid ABC transporter substrate-bindi... 228 2e-58 Q7CZC4.2 Q7CZC4_AGRT5 ABC transporter, substrate binding protein... 218 3e-55 F0LDT1.1 F0LDT1_9RHIZ Amino acid ABC transporter, substrate bind... 207 4e-52 >D8IPW4.1 D8IPW4_HERSS ABC-type amino-acid transport system, periplasmic component protein Length = 267 Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 168/188 (89%), Positives = 178/188 (94%), Gaps = 1/188 (0%) Query: 1 VEIVPLVPPARIPALESGKVDFLAATLAPTPERAKSVMFTIPYSGFELSIVGPVASKFKN 60 VEIVPLVPPARIPALESGKVD LAATLAPTPERAKSV+FTIPYSGFELSIV PV S +K Sbjct: 81 VEIVPLVPPARIPALESGKVDMLAATLAPTPERAKSVLFTIPYSGFELSIVAPVGSNYKK 140 Query: 61 LNDLVKKKVGVSRGSTNDTALTRLAPAGTVLVRFEDDSTVTQALLSGQVDAISIPNTMAT 120 L+DLVKKKVGVSRGSTNDTALTRLAP GTVLVRFEDDSTVTQALLS QVDAISIPNTMA Sbjct: 141 LDDLVKKKVGVSRGSTNDTALTRLAPPGTVLVRFEDDSTVTQALLSNQVDAISIPNTMAN 200 Query: 121 EIVKTRGAGKIDIKFPYSVQPNSMTVRKGAFDLQQWLNNFIYYVKLNGELDAISRKWSGS 180 EIVK+RG GKI++KFPYSVQPNSMTVRKG+++LQQWLNNFIYYVKLNGELDAISRKW+G Sbjct: 201 EIVKSRGQGKIEVKFPYSVQPNSMTVRKGSYELQQWLNNFIYYVKLNGELDAISRKWAG- 259 Query: 181 PLPNLPVF 188 PLPNLPVF Sbjct: 260 PLPNLPVF 267 >Q0K085.1 Q0K085_CUPNH ABC-type transporter, periplasmic component: PAAT family Length = 267 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 125/188 (66%), Positives = 152/188 (80%) Query: 1 VEIVPLVPPARIPALESGKVDFLAATLAPTPERAKSVMFTIPYSGFELSIVGPVASKFKN 60 V+IVPL P+RIPALE+GKVDFL ATLAPTPERA+++MF+ PYS FEL+I PVA+K+ Sbjct: 80 VDIVPLTSPSRIPALEAGKVDFLVATLAPTPERARAIMFSAPYSAFELTIFAPVAAKYAR 139 Query: 61 LNDLVKKKVGVSRGSTNDTALTRLAPAGTVLVRFEDDSTVTQALLSGQVDAISIPNTMAT 120 L +L KKKVGV+RG+T DTALTRLA G +VRFEDD+T QAL+S QV+AI++PNT Sbjct: 140 LTELGKKKVGVTRGTTQDTALTRLAVPGMNIVRFEDDATCAQALISNQVEAIALPNTTGN 199 Query: 121 EIVKTRGAGKIDIKFPYSVQPNSMTVRKGAFDLQQWLNNFIYYVKLNGELDAISRKWSGS 180 EI+K RGAGK D KF +SVQPNSM VR+ AF+L+QWLN I YVKLNGELDAI++KW+G Sbjct: 200 EIMKARGAGKFDAKFAFSVQPNSMAVRRDAFELRQWLNTTISYVKLNGELDAIAQKWTGK 259 Query: 181 PLPNLPVF 188 LP L F Sbjct: 260 ALPALQAF 267 >Q125C2.1 Q125C2_POLSJ Amino acid ABC transporter substrate-binding protein, PAAT family Length = 268 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/189 (59%), Positives = 142/189 (75%), Gaps = 1/189 (0%) Query: 1 VEIVPLVPPARIPALESGKVDFLAATLAPTPERAKSVMFTIPYSGFELSIVGPVASKFKN 60 +E+V L PPARIPALESGKVDFL +TLAPTPERAK+VMFTIPY+ F++ I A K K+ Sbjct: 80 LEMVALEPPARIPALESGKVDFLVSTLAPTPERAKTVMFTIPYNAFQVGIYAKKALKVKD 139 Query: 61 LNDLVKKKVGVSRGSTNDTALTRL-APAGTVLVRFEDDSTVTQALLSGQVDAISIPNTMA 119 DL KKVGV+RGS+ + AL + G +VRF+ D+ V QA+ SGQ+DA + P+TMA Sbjct: 140 WGDLKGKKVGVNRGSSVEAALVKQEGLVGLKVVRFDTDAAVIQAVFSGQIDACAEPDTMA 199 Query: 120 TEIVKTRGAGKIDIKFPYSVQPNSMTVRKGAFDLQQWLNNFIYYVKLNGELDAISRKWSG 179 + +K R G + +KF +S QPNS+ VRK AF+LQQWLNN IYY+K+NGELD I+RKW G Sbjct: 200 NQSLKARPDGDMALKFFFSKQPNSIAVRKDAFELQQWLNNTIYYIKVNGELDEIARKWVG 259 Query: 180 SPLPNLPVF 188 SPLP LP F Sbjct: 260 SPLPELPTF 268 >Q7CZC4.2 Q7CZC4_AGRT5 ABC transporter, substrate binding protein (Amino acid) Length = 267 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 109/189 (57%), Positives = 134/189 (70%), Gaps = 1/189 (0%) Query: 1 VEIVPLVPPARIPALESGKVDFLAATLAPTPERAKSVMFTIPYSGFELSIVGPVASKFKN 60 V +V L PP+RIPALESGKVDFL ATLAPTPERAK+VMFT PYS F++ I +K + Sbjct: 79 VTMVQLTPPSRIPALESGKVDFLVATLAPTPERAKAVMFTNPYSAFQVGIYSHKDTKIEK 138 Query: 61 LNDLVKKKVGVSRGSTNDTA-LTRLAPAGTVLVRFEDDSTVTQALLSGQVDAISIPNTMA 119 DL VGV+RGS+ + + R G ++RF+DD+T QAL SGQV AI+ P+ A Sbjct: 139 WEDLKGMTVGVNRGSSVEREFVNREKELGLTILRFDDDATTMQALFSGQVQAIAGPDAQA 198 Query: 120 TEIVKTRGAGKIDIKFPYSVQPNSMTVRKGAFDLQQWLNNFIYYVKLNGELDAISRKWSG 179 +K RG ++KF +S+QPNSMTVRK A DL QWLNN IYY+K NGELDAI+RKW G Sbjct: 199 NAAIKLRGDTTTEVKFFFSIQPNSMTVRKDAVDLHQWLNNTIYYIKQNGELDAIARKWVG 258 Query: 180 SPLPNLPVF 188 +PLP LP F Sbjct: 259 TPLPVLPTF 267 >F0LDT1.1 F0LDT1_9RHIZ Amino acid ABC transporter, substrate binding protein Length = 267 Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 101/188 (53%), Positives = 134/188 (71%) Query: 1 VEIVPLVPPARIPALESGKVDFLAATLAPTPERAKSVMFTIPYSGFELSIVGPVASKFKN 60 VE+VPL PPARIPAL++GKVDFL ATLAPT ERAK+VMFT PYS F + I+ KF+N Sbjct: 80 VELVPLTPPARIPALQTGKVDFLVATLAPTGERAKTVMFTQPYSAFNMDIISGKDQKFEN 139 Query: 61 LNDLVKKKVGVSRGSTNDTALTRLAPAGTVLVRFEDDSTVTQALLSGQVDAISIPNTMAT 120 L+ L K+V V+RGS+ +TAL + G +V +EDDST QALL+GQVDA+++P+T+ Sbjct: 140 LDSLKGKRVSVNRGSSQETALRKANVEGLEIVVYEDDSTSAQALLAGQVDAVALPSTVGE 199 Query: 121 EIVKTRGAGKIDIKFPYSVQPNSMTVRKGAFDLQQWLNNFIYYVKLNGELDAISRKWSGS 180 I+K R + + F + Q NSM + F+L+QWLN IY +K++G+LD IS KW+G Sbjct: 200 AIIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDLDRISVKWTGR 259 Query: 181 PLPNLPVF 188 PLP LP F Sbjct: 260 PLPQLPSF 267