BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0024.p         (78 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IPH4.1 D8IPH4_HERSS NAD-dependent formate dehydrogenase delta ...   104   5e-21
Q1LQY3.1 Q1LQY3_RALME NAD-dependent formate dehydrogenase delta ...    99   2e-19
B3R0Z6.1 B3R0Z6_CUPTR NAD-dependent formate dehydrogenase delta ...    97   1e-18
Q0KDX9.1 Q0KDX9_CUPNH NAD-dependent formate dehydrogenase delta ...    94   5e-18
Q475D0.1 Q475D0_CUPPJ Formate dehydrogenase delta subunit EC=1.2...    94   7e-18

>D8IPH4.1 D8IPH4_HERSS NAD-dependent formate dehydrogenase delta subunit
          protein EC=1.2.1.2
          Length = 75

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 58/75 (77%)

Query: 1  MNLPHLIKMANQIGTFFSTMPDRVQAEKDLATHIKRFWEPRMRRALLAHVEQEGGSELSE 60
          MN  HL+KMANQIG+FFSTMPDR QA  DLATH+KRFWEPRMR+A L H+E+  G+ +  
Sbjct: 1  MNTEHLVKMANQIGSFFSTMPDRDQAIADLATHLKRFWEPRMRKAFLEHIEKTQGAGVDA 60

Query: 61 IVLTAVKKHGAELQV 75
          IVL AV +H  +L V
Sbjct: 61 IVLEAVNRHLQQLAV 75


>Q1LQY3.1 Q1LQY3_RALME NAD-dependent formate dehydrogenase delta subunit
          EC=1.2.1.2
          Length = 80

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 58/76 (76%)

Query: 1  MNLPHLIKMANQIGTFFSTMPDRVQAEKDLATHIKRFWEPRMRRALLAHVEQEGGSELSE 60
          M++ +L+KMANQIGTFF  MPDR +A  D+A+H+KRFWEPRMRRALLAH++  GG  L  
Sbjct: 1  MHIDNLVKMANQIGTFFEAMPDRDEALGDIASHLKRFWEPRMRRALLAHIDTTGGEGLDP 60

Query: 61 IVLTAVKKHGAELQVA 76
          IV  AV +H  ++ VA
Sbjct: 61 IVQAAVARHRDKVAVA 76


>B3R0Z6.1 B3R0Z6_CUPTR NAD-dependent formate dehydrogenase delta subunit
          EC=1.2.1.2
          Length = 74

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 55/74 (74%)

Query: 1  MNLPHLIKMANQIGTFFSTMPDRVQAEKDLATHIKRFWEPRMRRALLAHVEQEGGSELSE 60
          M + +LI MANQIG+FF  MPDR +A  D+A HIKRFWEPRMRRALL HV+ E GS L E
Sbjct: 1  MKIDNLITMANQIGSFFEAMPDREEAVSDIAGHIKRFWEPRMRRALLGHVDAEAGSGLLE 60

Query: 61 IVLTAVKKHGAELQ 74
          IV  A+ +H A L+
Sbjct: 61 IVQEALGRHRAMLE 74


>Q0KDX9.1 Q0KDX9_CUPNH NAD-dependent formate dehydrogenase delta subunit
          EC=1.2.1.2
          Length = 74

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 55/74 (74%)

Query: 1  MNLPHLIKMANQIGTFFSTMPDRVQAEKDLATHIKRFWEPRMRRALLAHVEQEGGSELSE 60
          M + +LI MANQIG+FF  MPDR +A  D+A HIKRFWEPRMR+ALL HV+ E GS L +
Sbjct: 1  MKIDNLITMANQIGSFFEAMPDREEAVSDIAGHIKRFWEPRMRKALLGHVDAEAGSGLLD 60

Query: 61 IVLTAVKKHGAELQ 74
          IV  A+ +H A L+
Sbjct: 61 IVREALGRHRAMLE 74


>Q475D0.1 Q475D0_CUPPJ Formate dehydrogenase delta subunit EC=1.2.1.2
          Length = 74

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 54/74 (72%)

Query: 1  MNLPHLIKMANQIGTFFSTMPDRVQAEKDLATHIKRFWEPRMRRALLAHVEQEGGSELSE 60
          M + +LI MANQIG+FF  MPDR +A  D+A HIKRFWEPRMRRALL HV+ + G+ L E
Sbjct: 1  MKIDNLITMANQIGSFFEAMPDREEALADIAGHIKRFWEPRMRRALLGHVDADAGTGLLE 60

Query: 61 IVLTAVKKHGAELQ 74
          IV  AV +H   L+
Sbjct: 61 IVQEAVGRHRGVLE 74