BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0010.p         (110 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9THI7.1 B9THI7_RICCO Putative uncharacterized protein (Fragment)     180   5e-44
F1W008.1 F1W008_9BURK Putative uncharacterized protein                179   1e-43
B6J2Z4.1 B6J2Z4_COXB2 Lysine-specific permease                        139   1e-31
Q83AT2.1 Q83AT2_COXBU Lysine-specific permease                        139   1e-31
A9NAP3.1 A9NAP3_COXBR Putative membrane protein                       139   2e-31

>B9THI7.1 B9THI7_RICCO Putative uncharacterized protein (Fragment)
          Length = 368

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 88/98 (89%), Positives = 94/98 (95%)

Query: 3   KIREILLGKALDPLKSETRHSLALVAFLAWVGLGADGLSSSAYGPEESFRALGEHTHLGL 62
           KIREI+LGK LDP+KSETRHS+ALVAFLAWVGLGADGLSSSAYGPEE+FRALG HTHLGL
Sbjct: 5   KIREIILGKPLDPMKSETRHSMALVAFLAWVGLGADGLSSSAYGPEETFRALGGHTHLGL 64

Query: 63  YLALATALTVFIIALAYNQVIELFPTGGGGYRVATXSV 100
           Y+ALATA+TVFIIALAYNQVIELFPTGGGGYRVAT  V
Sbjct: 65  YMALATAVTVFIIALAYNQVIELFPTGGGGYRVATKLV 102


>F1W008.1 F1W008_9BURK Putative uncharacterized protein
          Length = 653

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/98 (89%), Positives = 94/98 (95%)

Query: 3   KIREILLGKALDPLKSETRHSLALVAFLAWVGLGADGLSSSAYGPEESFRALGEHTHLGL 62
           KIRE+ LGKALDPLK+ETRHSLALVAFLAWVGLGADGLSSSAYGPEE+FRALG HTHLGL
Sbjct: 6   KIREVFLGKALDPLKTETRHSLALVAFLAWVGLGADGLSSSAYGPEETFRALGVHTHLGL 65

Query: 63  YLALATALTVFIIALAYNQVIELFPTGGGGYRVATXSV 100
           Y+A+ATALTVFIIALAYNQVIELFPTGGGGYRVA+  V
Sbjct: 66  YMAIATALTVFIIALAYNQVIELFPTGGGGYRVASKLV 103


>B6J2Z4.1 B6J2Z4_COXB2 Lysine-specific permease
          Length = 647

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 87/97 (89%)

Query: 1  MLKIREILLGKALDPLKSETRHSLALVAFLAWVGLGADGLSSSAYGPEESFRALGEHTHL 60
          M +IRE+++GK  DP+K +TR  +ALVAFLAW+GLGADGLSSS YGPE++F ALG+HTHL
Sbjct: 1  MRRIRELIIGKPRDPMKKDTRKHIALVAFLAWIGLGADGLSSSCYGPEQAFYALGQHTHL 60

Query: 61 GLYLALATALTVFIIALAYNQVIELFPTGGGGYRVAT 97
           L+LALATA+TVF+IALAYNQVI+LFP GGGGY+VAT
Sbjct: 61 ALFLALATAITVFLIALAYNQVIKLFPNGGGGYKVAT 97


>Q83AT2.1 Q83AT2_COXBU Lysine-specific permease
          Length = 647

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 87/97 (89%)

Query: 1  MLKIREILLGKALDPLKSETRHSLALVAFLAWVGLGADGLSSSAYGPEESFRALGEHTHL 60
          M +IRE+++GK  DP+K +TR  +ALVAFLAW+GLGADGLSSS YGPE++F ALG+HTHL
Sbjct: 1  MRRIRELIIGKPRDPMKKDTRKHIALVAFLAWIGLGADGLSSSCYGPEQAFYALGQHTHL 60

Query: 61 GLYLALATALTVFIIALAYNQVIELFPTGGGGYRVAT 97
           L+LALATA+TVF+IALAYNQVI+LFP GGGGY+VAT
Sbjct: 61 ALFLALATAITVFLIALAYNQVIKLFPNGGGGYKVAT 97


>A9NAP3.1 A9NAP3_COXBR Putative membrane protein
          Length = 647

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 87/97 (89%)

Query: 1  MLKIREILLGKALDPLKSETRHSLALVAFLAWVGLGADGLSSSAYGPEESFRALGEHTHL 60
          M +IRE+++GK  DP+K +TR  +ALVAFLAW+GLGADGLSSS YGPE++F ALG+HTHL
Sbjct: 1  MRRIRELIIGKPRDPMKKDTRKHIALVAFLAWIGLGADGLSSSCYGPEQAFYALGQHTHL 60

Query: 61 GLYLALATALTVFIIALAYNQVIELFPTGGGGYRVAT 97
           L+LALATA+TVF+IALAYNQVI+LFP GGGGY+VAT
Sbjct: 61 ALFLALATAITVFLIALAYNQVIKLFPNGGGGYKVAT 97