BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0110.p         (50 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J245.1 D8J245_HERSS Putative uncharacterized protein                 77   7e-13

>D8J245.1 D8J245_HERSS Putative uncharacterized protein
          Length = 49

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 38/47 (80%)

Query: 3  NYFAALYRKLVDYLNDSSALTTGSHRGEPHCCGMYSGLSDMEQGHEK 49
          NYFA LYRKLVD+LNDSS L TGSHRG PHCC +YSGLS M Q  ++
Sbjct: 2  NYFAKLYRKLVDFLNDSSELDTGSHRGAPHCCSLYSGLSSMSQEEQR 48