BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0053.p         (57 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J280.1 D8J280_HERSS Periplasmic sensor signal transduction his...    80   7e-14
F1VZ64.1 F1VZ64_9BURK Putative uncharacterized protein                 75   4e-12

>D8J280.1 D8J280_HERSS Periplasmic sensor signal transduction histidine
          kinase protein
          Length = 459

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/48 (75%), Positives = 41/48 (85%)

Query: 1  MRPSIKINLLKWLIAPLLAVNLIGAGLTYWLAWLPAQDAFDQSITDXS 48
          M  SI+ +LLKWLIAPLL VNLIGAGLTYWLAWLPAQ AFDQ++ D +
Sbjct: 4  MHSSIRRDLLKWLIAPLLLVNLIGAGLTYWLAWLPAQHAFDQNLMDST 51


>F1VZ64.1 F1VZ64_9BURK Putative uncharacterized protein
          Length = 452

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/46 (78%), Positives = 40/46 (86%)

Query: 1  MRPSIKINLLKWLIAPLLAVNLIGAGLTYWLAWLPAQDAFDQSITD 46
          M  SI+INLLKWLIAPLLA+NLIGA LTY LAW+PAQ AFDQS+ D
Sbjct: 1  MNRSIRINLLKWLIAPLLAINLIGAALTYRLAWVPAQMAFDQSLAD 46