BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0031.p         (178 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUD1.1 D8IUD1_HERSS ABC-type sugar transport system, ATPase co...   255   1e-66
F1VVZ8.1 F1VVZ8_9BURK Ribose ABC transport system, ATP-binding p...   236   8e-61
B2JHS7.1 B2JHS7_BURP8 ABC transporter related                         234   4e-60
Q0BFL1.1 Q0BFL1_BURCM Monosaccharide ABC transporter ATP-binding...   229   1e-58
B1FQ62.1 B1FQ62_9BURK ABC transporter related                         229   1e-58

>D8IUD1.1 D8IUD1_HERSS ABC-type sugar transport system, ATPase component
           protein
          Length = 522

 Score =  255 bits (652), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 120/155 (77%), Positives = 135/155 (87%)

Query: 9   LLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTTGAMQLD 68
           LL+LSGIGK Y  PVL  + L+LRPGQ+LALTGENGAGKSTLSKI+CGLV ++ G M LD
Sbjct: 13  LLTLSGIGKRYAAPVLDGIDLDLRPGQVLALTGENGAGKSTLSKIICGLVDASAGGMMLD 72

Query: 69  GQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKLAALAQAQ 128
           GQPY P SRT+AE LGIRMVMQELNLIPTLSIAENLFL +LP+RFGWID+ KLA  A+AQ
Sbjct: 73  GQPYAPASRTQAEGLGIRMVMQELNLIPTLSIAENLFLEKLPRRFGWIDRKKLAEAARAQ 132

Query: 129 MAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163
           M  VGL ++DPWTPVGDLG+GHQQMVEIARNLIGS
Sbjct: 133 MEVVGLGELDPWTPVGDLGLGHQQMVEIARNLIGS 167


>F1VVZ8.1 F1VVZ8_9BURK Ribose ABC transport system, ATP-binding protein RbsA
          Length = 516

 Score =  236 bits (602), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 111/161 (68%), Positives = 137/161 (85%)

Query: 3   NPSSPALLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTT 62
           N ++ ALL+LSGIGKTYV+ VL +VSL L  GQ+LALTGENGAGKST+SKI+CGL  ++ 
Sbjct: 6   NANANALLTLSGIGKTYVQTVLQDVSLSLHAGQVLALTGENGAGKSTVSKIICGLEPASA 65

Query: 63  GAMQLDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKLA 122
           G+M LDG+PYQP SR++AE  G+RMV+QELNLIPTLS+AENL+L QLP RFGWI++ +L 
Sbjct: 66  GSMLLDGRPYQPVSRSDAEAHGMRMVLQELNLIPTLSVAENLYLRQLPGRFGWINRRQLE 125

Query: 123 ALAQAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163
             A+ QMA VGLT+IDPWT VG+LG+GHQQM+EIARNLIG 
Sbjct: 126 QDARVQMARVGLTNIDPWTLVGELGIGHQQMIEIARNLIGD 166


>B2JHS7.1 B2JHS7_BURP8 ABC transporter related
          Length = 520

 Score =  234 bits (597), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 135/158 (85%), Gaps = 1/158 (0%)

Query: 7   PALLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTTGAMQ 66
           PA+LS++GIGKTYVEPVL++VSL LR G+ LALTGENGAGKSTLSKI+ GLV  TTGAMQ
Sbjct: 2   PAVLSVTGIGKTYVEPVLADVSLALRAGEALALTGENGAGKSTLSKIIGGLVDPTTGAMQ 61

Query: 67  LDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQR-FGWIDKPKLAALA 125
           L+G+PY P SRT+AE LGIRMVMQELNL+PTLS+AENLFLN+LP+  FGWID+  L A A
Sbjct: 62  LEGKPYAPVSRTQAEALGIRMVMQELNLLPTLSVAENLFLNRLPRNGFGWIDRKTLRAHA 121

Query: 126 QAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163
           +  MA VGL  IDP T VG+LG+GHQQMVEIARNLIG 
Sbjct: 122 REAMAQVGLDAIDPDTLVGELGIGHQQMVEIARNLIGD 159


>Q0BFL1.1 Q0BFL1_BURCM Monosaccharide ABC transporter ATP-binding protein,
           CUT2 family
          Length = 537

 Score =  229 bits (583), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/162 (70%), Positives = 133/162 (82%), Gaps = 2/162 (1%)

Query: 4   PSSPAL--LSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQST 61
           PS  A+  LS+SG+GKTY EPVL++V+L L PG+ LALTGENGAGKSTLSKI+ GLV  T
Sbjct: 7   PSRSAIPVLSVSGVGKTYAEPVLADVTLTLAPGEALALTGENGAGKSTLSKIIGGLVDPT 66

Query: 62  TGAMQLDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKL 121
           TG MQL GQ Y P SRT+AE LG+RMVMQELNL+PTL++AENLFLN+LP+RFG ID+ +L
Sbjct: 67  TGTMQLGGQAYAPASRTQAEALGVRMVMQELNLLPTLTVAENLFLNRLPRRFGIIDRARL 126

Query: 122 AALAQAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163
              AQA MA VGL  IDP TPVG LG+GHQQMVEIARNLIG 
Sbjct: 127 HDDAQAAMARVGLDAIDPDTPVGALGIGHQQMVEIARNLIGD 168


>B1FQ62.1 B1FQ62_9BURK ABC transporter related
          Length = 537

 Score =  229 bits (583), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/162 (70%), Positives = 133/162 (82%), Gaps = 2/162 (1%)

Query: 4   PSSPAL--LSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQST 61
           PS  A+  LS+SG+GKTY EPVL++V+L L PG+ LALTGENGAGKSTLSKI+ GLV  T
Sbjct: 7   PSRSAVPVLSVSGVGKTYAEPVLADVTLTLAPGEALALTGENGAGKSTLSKIIGGLVDPT 66

Query: 62  TGAMQLDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKL 121
           TG MQL GQ Y P SRT+AE LG+RMVMQELNL+PTL++AENLFLN+LP+RFG ID+ +L
Sbjct: 67  TGTMQLGGQAYAPASRTQAEALGVRMVMQELNLLPTLTVAENLFLNRLPRRFGIIDRARL 126

Query: 122 AALAQAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163
              AQA MA VGL  IDP TPVG LG+GHQQMVEIARNLIG 
Sbjct: 127 HDDAQAAMARVGLDAIDPDTPVGALGIGHQQMVEIARNLIGD 168