BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0023.p         (44 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IPK6.1 D8IPK6_HERSS ABC-type oligopeptide transport system, pe...    80   1e-13
A4G7H0.2 A4G7H0_HERAR ABC transporter, periplasmic substrate-bin...    79   2e-13
A6SX97.1 A6SX97_JANMA ABC transporter, periplasmic substrate-bin...    66   2e-09

>D8IPK6.1 D8IPK6_HERSS ABC-type oligopeptide transport system, periplasmic
           component protein
          Length = 609

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/40 (85%), Positives = 37/40 (92%)

Query: 1   VVPQWYSSTHRVAYRNRFGIPAVTPLYYQADPYVISSWWE 40
           VVP WYSSTHR+AY+NRFGIP V PLYYQADPYVIS+WWE
Sbjct: 566 VVPHWYSSTHRIAYQNRFGIPQVAPLYYQADPYVISTWWE 605


>A4G7H0.2 A4G7H0_HERAR ABC transporter, periplasmic substrate-binding protein
          Length = 616

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 36/40 (90%)

Query: 1   VVPQWYSSTHRVAYRNRFGIPAVTPLYYQADPYVISSWWE 40
           VV  WYSSTHRVAYR+RFGIPA  PLYYQADPYVISSWWE
Sbjct: 573 VVTHWYSSTHRVAYRDRFGIPATAPLYYQADPYVISSWWE 612


>A6SX97.1 A6SX97_JANMA ABC transporter, periplasmic substrate-binding protein
          Length = 606

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 33/44 (75%)

Query: 1   VVPQWYSSTHRVAYRNRFGIPAVTPLYYQADPYVISSWWEVSPK 44
           V+P WYSS+HR+AY  RFG+P   PLYYQ DPYVI +WW+   K
Sbjct: 563 VIPHWYSSSHRIAYWQRFGMPGKLPLYYQPDPYVIGTWWQEKAK 606