BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0022.p (564 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4G7H0.2 A4G7H0_HERAR ABC transporter, periplasmic substrate-bin... 899 0.0 D8IPK6.1 D8IPK6_HERSS ABC-type oligopeptide transport system, pe... 889 0.0 A6SX97.1 A6SX97_JANMA ABC transporter, periplasmic substrate-bin... 848 0.0 Q0K920.1 Q0K920_CUPNH ABC-type transporter, periplasmic componen... 674 0.0 D8NUV8.1 D8NUV8_RALSO Putative ABC-type transport system, peripl... 674 0.0 >A4G7H0.2 A4G7H0_HERAR ABC transporter, periplasmic substrate-binding protein Length = 616 Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/552 (78%), Positives = 482/552 (87%), Gaps = 6/552 (1%) Query: 1 MRKFTFSTLLLSFAATVGFSGPVLADHAFSLYDTPKYPAGFTHFDYFNPDAPKRGTLYLA 60 M K FS LL+ F + G A HAFSLYDTP+YPAGFTHFDY NPDAPK G L+LA Sbjct: 18 MAKSLFSFLLICFLSQ---GGSAFAAHAFSLYDTPRYPAGFTHFDYVNPDAPKGGELFLA 74 Query: 61 NPDRRTSFDKFNPFSLKGVAAAGVSTLMFETLAIGSSDEVATMYGLLADDMTLASDRMAM 120 NPDRRTSFDKFNPFS+KGV+AAGVS LMFETLA+GSSDE+ATMYGLLADDM LA DRM+M Sbjct: 75 NPDRRTSFDKFNPFSMKGVSAAGVSNLMFETLAVGSSDEIATMYGLLADDMVLAPDRMSM 134 Query: 121 TFHLNPKARFNNGDPVTAADVKYSYDTLLAKGAPQFKSMFADVKQCVVVDAQTVRFEFKT 180 TF LNP+ARFNNGDPV AADVKYS+DTL+AKGAPQFKS+FA+VKQCVV++ +TVRF+FK+ Sbjct: 135 TFRLNPRARFNNGDPVLAADVKYSFDTLIAKGAPQFKSIFAEVKQCVVLNERTVRFDFKS 194 Query: 181 RNHELPLIVGGVPVFSKKWAAGTAFDNIQLTPPITSGPYLIDTYDVGRNITYKRNPAYWG 240 NHELPLIVGGVPVFS+KWAAGT FD IQLTPPI +GPYLID YD GR I+YK NP YWG Sbjct: 195 LNHELPLIVGGVPVFSRKWAAGTDFDQIQLTPPIATGPYLIDRYDSGRAISYKLNPGYWG 254 Query: 241 TDIPTRKGSFNFERIAYRFYKDDVARLEAFKAGEFDVVVEYSAKSWVRNYNGPKFVSGEI 300 TDIP+RKG FNF RI YRFYKDDVARLEAFKAGEFD+VVEYSAK+W R+Y GPKF SGEI Sbjct: 255 TDIPSRKGMFNFGRINYRFYKDDVARLEAFKAGEFDLVVEYSAKNWARSYKGPKFSSGEI 314 Query: 301 VKRELKHSNGAGMQGFVMNLRRDQFKDARVRQALGLALDYEWMNRQLFYGQYSRIYSFFN 360 +KREL HSNGAGMQGFVMNLRR QF+D RVR+AL LALD+EWMNRQLF+G Y RIYSFFN Sbjct: 315 IKRELTHSNGAGMQGFVMNLRRPQFQDVRVRRALDLALDFEWMNRQLFFGSYKRIYSFFN 374 Query: 361 NSTLAATGAPEGDELKLLESIRASGTKIDPAVFGPAPVPPNTNPPGSLRANLLQARELLR 420 NS +AAT P DEL LLE +R +K+DP VFGPAPVPP+T+PP SLR NLL+A EL R Sbjct: 375 NSPMAATSLPSADELALLEPLR---SKLDPVVFGPAPVPPSTDPPRSLRGNLLEAVELFR 431 Query: 421 QAGWEYRDGALRNARGEVFAFEILDDQSALSRVISIYVRNLQKLGIRVTQRTADFALVAK 480 QAGW YRDGALRN +GE FAFEI+DDQSALSRVIS+YVRNLQKLGI+VTQRTAD+ALV K Sbjct: 432 QAGWTYRDGALRNDKGEPFAFEIMDDQSALSRVISVYVRNLQKLGIQVTQRTADYALVQK 491 Query: 481 RMDEFDYDMTSIRFPDVSSPGNEMFDMFGSKAADEKGSNNVWGLKDKAVDKLVEALVAAA 540 RM+EFD+DMTSIRFPDVSSPGNEMFDMFGS+AADEKGSNN WGLKD AVD+LVE LVAA Sbjct: 492 RMEEFDFDMTSIRFPDVSSPGNEMFDMFGSRAADEKGSNNAWGLKDPAVDRLVEKLVAAD 551 Query: 541 TRKDLVAAARGL 552 +R+ LVAAAR L Sbjct: 552 SRRQLVAAARAL 563 >D8IPK6.1 D8IPK6_HERSS ABC-type oligopeptide transport system, periplasmic component protein Length = 609 Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/551 (76%), Positives = 475/551 (86%), Gaps = 2/551 (0%) Query: 2 RKFTFSTLLLSFAATVGFSGPVLADHAFSLYDTPKYPAGFTHFDYFNPDAPKRGTLYLAN 61 KF S LL + A P A+HAFSLYDTP+Y GF+HFDY NPDAP+RGTLYLAN Sbjct: 8 HKFLLSCLLATVLAHA--PAPARAEHAFSLYDTPRYGPGFSHFDYVNPDAPRRGTLYLAN 65 Query: 62 PDRRTSFDKFNPFSLKGVAAAGVSTLMFETLAIGSSDEVATMYGLLADDMTLASDRMAMT 121 PDRRTSFDKFNP S+KGVAAAG+ LMFETLA+ S DEVAT+YGLLADDM LA DRM+MT Sbjct: 66 PDRRTSFDKFNPMSMKGVAAAGLDQLMFETLAVSSGDEVATVYGLLADDMQLAPDRMSMT 125 Query: 122 FHLNPKARFNNGDPVTAADVKYSYDTLLAKGAPQFKSMFADVKQCVVVDAQTVRFEFKTR 181 FHLNPKARFNNGD V+AADVKYS+DTL+AKGAPQ+KS+FADVK CVVVDA TVRF+F + Sbjct: 126 FHLNPKARFNNGDKVSAADVKYSFDTLMAKGAPQYKSVFADVKACVVVDASTVRFDFASS 185 Query: 182 NHELPLIVGGVPVFSKKWAAGTAFDNIQLTPPITSGPYLIDTYDVGRNITYKRNPAYWGT 241 NHELPLIV VPVFS+KWA GT FD IQLTPPI++GPYLI+ YD GR+ITYKRNP YWG Sbjct: 186 NHELPLIVASVPVFSRKWAQGTPFDQIQLTPPISTGPYLIERYDTGRSITYKRNPDYWGK 245 Query: 242 DIPTRKGSFNFERIAYRFYKDDVARLEAFKAGEFDVVVEYSAKSWVRNYNGPKFVSGEIV 301 D+P R+G FNFERI YRFYKDD+ARLEAFKAGEFDVVVEYSAK+W R+Y GP+F G I+ Sbjct: 246 DVPARRGMFNFERIVYRFYKDDLARLEAFKAGEFDVVVEYSAKNWARSYTGPQFRDGRII 305 Query: 302 KRELKHSNGAGMQGFVMNLRRDQFKDARVRQALGLALDYEWMNRQLFYGQYSRIYSFFNN 361 K+E KHSNGAGMQGFVMNLRRDQFKD RVRQA+GLALDYEWMNRQLFYGQY+RIYSFFNN Sbjct: 306 KKEFKHSNGAGMQGFVMNLRRDQFKDVRVRQAIGLALDYEWMNRQLFYGQYTRIYSFFNN 365 Query: 362 STLAATGAPEGDELKLLESIRASGTKIDPAVFGPAPVPPNTNPPGSLRANLLQARELLRQ 421 S LAATG P+GDEL LL+S++A G KIDPAVFGPAPVPP+TNPP SLRANL QARELL Q Sbjct: 366 SDLAATGEPQGDELALLKSLQAKGLKIDPAVFGPAPVPPSTNPPSSLRANLRQARELLAQ 425 Query: 422 AGWEYRDGALRNARGEVFAFEILDDQSALSRVISIYVRNLQKLGIRVTQRTADFALVAKR 481 AGW YRDGA+RNA+G +FEILDDQS++SRVIS++ RNL+ LGI V QR+AD+ALVAKR Sbjct: 426 AGWVYRDGAVRNAQGVPLSFEILDDQSSMSRVISVFARNLRTLGIDVVQRSADYALVAKR 485 Query: 482 MDEFDYDMTSIRFPDVSSPGNEMFDMFGSKAADEKGSNNVWGLKDKAVDKLVEALVAAAT 541 M++FD+DMTSIRFPD SSPGNE+ DMFGS+AADEKGSNN WGLKD VD+LV+ ++AA T Sbjct: 486 MEDFDFDMTSIRFPDTSSPGNELLDMFGSRAADEKGSNNAWGLKDPVVDQLVQTVIAADT 545 Query: 542 RKDLVAAARGL 552 R L AAAR L Sbjct: 546 RVKLTAAARAL 556 >A6SX97.1 A6SX97_JANMA ABC transporter, periplasmic substrate-binding protein Length = 606 Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/528 (76%), Positives = 462/528 (87%), Gaps = 9/528 (1%) Query: 31 LYDTPKYPAGFTHFDYFNPDAPKRGTLYLANPDRRTSFDKFNPFSLKGVAAAGVSTLMFE 90 LYDTPKYP GFTHFD+ NPDAPK G L+LANPDRRTSFDKFNPFS+KGV+AAG++ LMFE Sbjct: 29 LYDTPKYPPGFTHFDFVNPDAPKGGELFLANPDRRTSFDKFNPFSMKGVSAAGLTHLMFE 88 Query: 91 TLAIGSS------DEVATMYGLLADDMTLASDRMAMTFHLNPKARFNNGDPVTAADVKYS 144 +LA SS DEVATMYGLLA+DM L++DRM+MTF LNPKARFNNGDPV A+DVKYS Sbjct: 89 SLATSSSGSEAITDEVATMYGLLAEDMELSADRMSMTFRLNPKARFNNGDPVLASDVKYS 148 Query: 145 YDTLLAKGAPQFKSMFADVKQCVVVDAQTVRFEFKTRNHELPLIVGGVPVFSKKWAAGTA 204 +DTL+AK APQ KS+ A+VKQCVV++ +TVRF+FK N E+PLIVG VPVFS+KWAAGT Sbjct: 149 FDTLVAKSAPQVKSLLANVKQCVVLNERTVRFDFKALNREMPLIVGSVPVFSRKWAAGTD 208 Query: 205 FDNIQLTPPITSGPYLIDTYDVGRNITYKRNPAYWGTDIPTRKGSFNFERIAYRFYKDDV 264 FD IQL PPIT+GPYLID +D GR+I+YK NP YWG DIPTRKG +NF RI YRFYKDDV Sbjct: 209 FDKIQLIPPITTGPYLIDRFDTGRSISYKLNPDYWGRDIPTRKGMYNFGRINYRFYKDDV 268 Query: 265 ARLEAFKAGEFDVVVEYSAKSWVRNYNGPKFVSGEIVKRELKHSNGAGMQGFVMNLRRDQ 324 ARLEAFKAGEFD+VVE SAK+W R+Y GPKF +G I+KREL HSNGAGMQGF+MNLRR Q Sbjct: 269 ARLEAFKAGEFDLVVENSAKNWARSYKGPKFNNGTIIKRELAHSNGAGMQGFLMNLRRPQ 328 Query: 325 FKDARVRQALGLALDYEWMNRQLFYGQYSRIYSFFNNSTLAATGAPEGDELKLLESIRAS 384 F+D RVRQALGLALDYEWMNRQLF+G Y RIYSFFNNS +AATG P +EL LLE +R Sbjct: 329 FQDVRVRQALGLALDYEWMNRQLFFGSYKRIYSFFNNSPMAATGLPSAEELVLLEPLR-- 386 Query: 385 GTKIDPAVFGPAPVPPNTNPPGSLRANLLQARELLRQAGWEYRDGALRNARGEVFAFEIL 444 K+DPAVFG AP+PP+TNPPGSLRANLL+A EL RQAGWEYRDGALRNA+GEVFAFEI+ Sbjct: 387 -KKLDPAVFGQAPIPPDTNPPGSLRANLLKAVELFRQAGWEYRDGALRNAKGEVFAFEIM 445 Query: 445 DDQSALSRVISIYVRNLQKLGIRVTQRTADFALVAKRMDEFDYDMTSIRFPDVSSPGNEM 504 DDQSA+SRVIS+YVRNLQKLGI+VTQRTAD+AL+ KRM++FDYDMTSIRFPDVS+PGNEM Sbjct: 446 DDQSAMSRVISVYVRNLQKLGIQVTQRTADYALLQKRMEDFDYDMTSIRFPDVSTPGNEM 505 Query: 505 FDMFGSKAADEKGSNNVWGLKDKAVDKLVEALVAAATRKDLVAAARGL 552 FDMFGSKAADEKGS+N WGLKD AVD+LVEALVAA +R +L AAR L Sbjct: 506 FDMFGSKAADEKGSSNFWGLKDPAVDRLVEALVAADSRSELQGAARAL 553 >Q0K920.1 Q0K920_CUPNH ABC-type transporter, periplasmic component: PepT family Length = 633 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/558 (59%), Positives = 416/558 (74%), Gaps = 9/558 (1%) Query: 1 MRKFTFSTLLLSFAATVG-FSGPVLADHAFSLYDTPKYPAGFTHFDYFNPDAPKRGTLYL 59 +R + S L ++ AA V FS P LA H F+L+ KY A F HFDY NP+AP GTL L Sbjct: 22 LRGWVASGLAMALAAGVSLFSNPALAAHGFALHGDLKYQADFRHFDYANPNAPAGGTLTL 81 Query: 60 ANPDRRTSFDKFNPFSLKGVAAAGVSTLMFETLAIGSSDEVATMYGLLADDMTLASDRMA 119 ANPDRRTSFDKFNPF+LKG +A G++ LMFE+L I S+DE A+ YGLLA+D+T+A D ++ Sbjct: 82 ANPDRRTSFDKFNPFTLKGTSAPGLNALMFESLLISSADESASAYGLLAEDVTVAPDELS 141 Query: 120 MTFHLNPKARFNNGDPVTAADVKYSYDTLLAKGA-PQFKSMFADVKQCVVVDAQTVRFEF 178 +TF + P+ARF+NGDPV A+DVKYSYD L++K + P ++SM DVK +V +TVRFEF Sbjct: 142 VTFTIRPQARFSNGDPVLASDVKYSYDMLMSKASSPGYRSMCTDVKAVIVAGERTVRFEF 201 Query: 179 KTRNHELPLIVGGVPVFSKKWAAGTAFDNIQLTPPITSGPYLIDTYDVGRNITYKRNPAY 238 K RN ELPLIVG +PVFSKKW A F+ + PP+TSGPYLI+ YD GR I ++R+P Y Sbjct: 202 KQRNRELPLIVGSLPVFSKKWTAKVPFEKLTFEPPVTSGPYLIERYDAGRGIIFQRDPKY 261 Query: 239 WGTDIPTRKGSFNFERIAYRFYKDDVARLEAFKAGEFDVVVEYSAKSWVRNYNGPKFVSG 298 WG D+ R+G+FNF R+AYR YKD+ A+LEAFKAGEFD +VEY AK+W ++Y G +F +G Sbjct: 262 WGKDLAVRRGTFNFARVAYRLYKDETAKLEAFKAGEFDAIVEYKAKNWAKSYQGTRFRNG 321 Query: 299 EIVKRELKHSNGAGMQGFVMNLRRDQFKDARVRQALGLALDYEWMNRQLFYGQYSRIYSF 358 E++K E H NGAGMQGFVMN+R+ F+D RVRQAL LALD+EW+NRQLFYG Y R+ S+ Sbjct: 322 ELLKTEFPHRNGAGMQGFVMNMRKPVFQDVRVRQALILALDFEWLNRQLFYGAYRRLDSW 381 Query: 359 FNNSTLAAT----GAPEGDELKLLESIRASGTKIDPAVFGPAPVPPNTNPPGSLRANLLQ 414 F+NS LAA+ G P EL LLE +RA ++ P VFGP V P+T P SLR NL Q Sbjct: 382 FSNSELAASATFDGRPSPGELALLEPLRA---ELPPEVFGPDVVQPSTAAPRSLRDNLRQ 438 Query: 415 ARELLRQAGWEYRDGALRNARGEVFAFEILDDQSALSRVISIYVRNLQKLGIRVTQRTAD 474 AR LL QAGW Y DGALRNA+GE FE LDD A+SRVI+ YVRNL+KLGI+V QRT D Sbjct: 439 ARRLLAQAGWTYTDGALRNAKGETLVFEFLDDGGAMSRVITTYVRNLEKLGIQVNQRTTD 498 Query: 475 FALVAKRMDEFDYDMTSIRFPDVSSPGNEMFDMFGSKAADEKGSNNVWGLKDKAVDKLVE 534 FAL KR+++FD+DM SIRFPD SPGNE+ D F S+AA GS+N++GLK VDKLV+ Sbjct: 499 FALYQKRLEDFDFDMVSIRFPDSQSPGNELRDRFSSEAAGTPGSDNLFGLKSPVVDKLVD 558 Query: 535 ALVAAATRKDLVAAARGL 552 ++ A TR++LV A R L Sbjct: 559 NVLHAHTRQELVTAGRAL 576 >D8NUV8.1 D8NUV8_RALSO Putative ABC-type transport system, periplasmic component Length = 693 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/543 (61%), Positives = 405/543 (74%), Gaps = 20/543 (3%) Query: 27 HAFSLYDTPKYPAGFTHFDYFNPDAPKRGTLYLANPDRRTSFDKFNPFSLKGVAAAGVST 86 H ++ Y KYPAGFTHF Y NP AP GTL L NPDRRTSFDKFNPF++KG AA G++ Sbjct: 99 HGYAEYGDLKYPAGFTHFAYLNPKAPIGGTLALGNPDRRTSFDKFNPFTIKGTAAPGLNA 158 Query: 87 LMFETLAIGSSDEVATMYGLLADDMTLASDRMAMTFHLNPKARFNNGDPVTAADVKYSYD 146 L+FE+L IGS DE A+ YGLLADD+T+A D +++TFHLNP ARF+NGDPV AADVKYSYD Sbjct: 159 LVFESLLIGSWDETASGYGLLADDVTVAPDELSVTFHLNPLARFSNGDPVRAADVKYSYD 218 Query: 147 TLLAKGA-PQFKSMFADVKQCVVVDAQTVRFEFKTRNHELPLIVGGVPVFSKKWAAG--- 202 L+ KGA P ++SM ADV + VVD +T+R++FK RN ELPLIVG +PVFS KW G Sbjct: 219 MLMGKGASPAYRSMTADVSRVTVVDERTIRYDFKRRNKELPLIVGNLPVFSPKWGKGSGK 278 Query: 203 ---------TAFDNIQLTPPITSGPYLIDTYDVGRNITYKRNPAYWGTDIPTRKGSFNFE 253 T FD I PI SGPYLI+ YD R IT++RNP YWG ++ R+G++NFE Sbjct: 279 PEDPAGGKDTPFDKITFQEPIGSGPYLIERYDGARGITFRRNPDYWGRNLSVRRGAYNFE 338 Query: 254 RIAYRFYKDDVARLEAFKAGEFDVVVEYSAKSWVRNYNGPKFVSGEIVKRELKHSNGAGM 313 RI Y+ YKD+ ARLEAFKAGE+D +VEY AK+W ++Y G KF SGE+VK E H NGAGM Sbjct: 339 RIQYKLYKDETARLEAFKAGEYDAMVEYRAKNWAKSYVGVKFRSGELVKSEFPHRNGAGM 398 Query: 314 QGFVMNLRRDQFKDARVRQALGLALDYEWMNRQLFYGQYSRIYSFFNNSTLAA----TGA 369 QGFVMNLR+ F+D RVR+AL LALD+EW+NRQLFYG Y R+ S+F NS LAA TG Sbjct: 399 QGFVMNLRKPIFRDPRVRRALALALDFEWLNRQLFYGAYRRLDSYFANSELAASDSITGM 458 Query: 370 PEGDELKLLESIRASGTKIDPAVFGPAPVPPNTNPPGSLRANLLQARELLRQAGWEYRDG 429 P EL LLE +R K+DP VFG P PP+T+PPGSLR NL QAR LL QAGW Y DG Sbjct: 459 PGKGELALLEPLRG---KLDPEVFGVLPAPPSTDPPGSLRDNLRQARRLLAQAGWTYDDG 515 Query: 430 ALRNARGEVFAFEILDDQSALSRVISIYVRNLQKLGIRVTQRTADFALVAKRMDEFDYDM 489 ALRNA+GE F FE+LDD A+SRV++ YVRNL+KLGIRV QR D+AL KR++EFD+DM Sbjct: 516 ALRNAKGEPFTFEMLDDGGAMSRVMAAYVRNLEKLGIRVNQRITDYALYQKRLEEFDFDM 575 Query: 490 TSIRFPDVSSPGNEMFDMFGSKAADEKGSNNVWGLKDKAVDKLVEALVAAATRKDLVAAA 549 S+RFPD SPGNE+ D FGS AADE GS+NV GLK AVD L++ ++ + R++LV A+ Sbjct: 576 ISLRFPDSQSPGNELKDRFGSAAADEPGSDNVIGLKSPAVDALIDDVLRSGNREELVTAS 635 Query: 550 RGL 552 R L Sbjct: 636 RAL 638