BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0013.p         (40 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IPL5.1 D8IPL5_HERSS 2-isopropylmalate synthase 2 EC=2.3.3.13         64   6e-09

>D8IPL5.1 D8IPL5_HERSS 2-isopropylmalate synthase 2 EC=2.3.3.13
          Length = 567

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/40 (85%), Positives = 37/40 (92%)

Query: 1   VGIDANIVTASFKAVLSAVNRQIAIDQSANQSSSPKAKAA 40
           VGIDANIVTASFKAVLSAVNRQIAI +SANQ+ S +AKAA
Sbjct: 528 VGIDANIVTASFKAVLSAVNRQIAISESANQAGSSQAKAA 567