BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0004.p (193 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPD3.1 D8IPD3_HERSS DNA-3-methyladenine glycosylase I protein ... 317 4e-85 A6SU20.1 A6SU20_JANMA DNA-3-methyladenine glycosylase I EC=3.2.2.20 308 3e-82 A4G1C0.1 A4G1C0_HERAR DNA-3-methyladenine glycosylase I (3-methy... 285 3e-75 F1W145.1 F1W145_9BURK DNA-3-methyladenine glycosylase 274 4e-72 B8GMA7.1 B8GMA7_THISH DNA-3-methyladenine glycosylase I EC=3.2.2.20 259 1e-67 >D8IPD3.1 D8IPD3_HERSS DNA-3-methyladenine glycosylase I protein EC=3.2.2.20 Length = 189 Score = 317 bits (813), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 144/186 (77%), Positives = 167/186 (89%) Query: 2 SVQRCAWVNLANPRYVTYHDEEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRETYRA 61 ++ RC WVNLANPRY+ YHD EWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRE+YRA Sbjct: 4 TLTRCGWVNLANPRYIDYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRESYRA 63 Query: 62 AFDQWNPEKIARYTDAKVAKLLADPGIVRNRLKVAATITNAQSYLRLRDEVGGLDPFLWA 121 AFD W+ EKIARY + KVA+LLADPGIVRNRLKVAATI NA++YL+LR+E+GGLD +LWA Sbjct: 64 AFDGWDAEKIARYDERKVAQLLADPGIVRNRLKVAATIGNARAYLKLREEIGGLDAYLWA 123 Query: 122 YVDGKPIRNKWKDLSDAPAKTALSDQVSKDLLKRGFKFVGSTIIYAYLQGIGIIDDHVVD 181 +VDG+ I N+W L++ PAKT LSD +SKDL +RGFKFVGSTIIYAYLQG+G+I+DHV D Sbjct: 124 HVDGQAIVNRWASLAECPAKTPLSDAISKDLARRGFKFVGSTIIYAYLQGVGVINDHVQD 183 Query: 182 CHCHGR 187 CHCHGR Sbjct: 184 CHCHGR 189 >A6SU20.1 A6SU20_JANMA DNA-3-methyladenine glycosylase I EC=3.2.2.20 Length = 190 Score = 308 bits (788), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 140/185 (75%), Positives = 164/185 (88%) Query: 1 MSVQRCAWVNLANPRYVTYHDEEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRETYR 60 M+ RC+WVN + YV YHDEEWGVPCHDETRLFEM+NLEGAQAGLSW TVLNKRE+YR Sbjct: 1 MTRTRCSWVNPDSALYVAYHDEEWGVPCHDETRLFEMINLEGAQAGLSWLTVLNKRESYR 60 Query: 61 AAFDQWNPEKIARYTDAKVAKLLADPGIVRNRLKVAATITNAQSYLRLRDEVGGLDPFLW 120 AAFDQW+ EKIARY KVA+LLA+PGI+RN+LKVAATI NAQ+YLRLRDEVGGLDP+LW Sbjct: 61 AAFDQWDAEKIARYDAKKVAELLANPGIIRNKLKVAATIGNAQAYLRLRDEVGGLDPYLW 120 Query: 121 AYVDGKPIRNKWKDLSDAPAKTALSDQVSKDLLKRGFKFVGSTIIYAYLQGIGIIDDHVV 180 AYV GKPI+N+W+++ AP KTALSDQ+SKDL KRGFKFVGSTI+YAY+Q IG+++DH V Sbjct: 121 AYVGGKPIKNRWENIKQAPVKTALSDQLSKDLAKRGFKFVGSTIMYAYMQAIGLVNDHTV 180 Query: 181 DCHCH 185 DC C+ Sbjct: 181 DCFCY 185 >A4G1C0.1 A4G1C0_HERAR DNA-3-methyladenine glycosylase I (3-methyladenine-DNA glycosylase I) (TAG I) (DNA-3-methyladenine glycosidase I) EC=3.2.2.20 Length = 190 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 130/185 (70%), Positives = 153/185 (82%) Query: 1 MSVQRCAWVNLANPRYVTYHDEEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRETYR 60 M++ RC+W N ANP Y+ YHDEEWGVPCHDETRLFEMLNLEGAQAGLSW T+LNKRE YR Sbjct: 1 MTLARCSWANPANPLYLKYHDEEWGVPCHDETRLFEMLNLEGAQAGLSWSTILNKRENYR 60 Query: 61 AAFDQWNPEKIARYTDAKVAKLLADPGIVRNRLKVAATITNAQSYLRLRDEVGGLDPFLW 120 AFDQW+ KIA Y KVA LLA+PGIVRNRLKVAATI NA++YLRL +++G LD FLW Sbjct: 61 VAFDQWDARKIAAYDADKVAALLANPGIVRNRLKVAATINNARAYLRLCEDIGSLDAFLW 120 Query: 121 AYVDGKPIRNKWKDLSDAPAKTALSDQVSKDLLKRGFKFVGSTIIYAYLQGIGIIDDHVV 180 AYVDG+PI N +++ PA T LSDQ+SKDL +RGFKFVGSTIIYAY+Q IG+++DH Sbjct: 121 AYVDGEPILNARASINETPATTPLSDQLSKDLARRGFKFVGSTIIYAYMQAIGMVNDHAQ 180 Query: 181 DCHCH 185 DC C+ Sbjct: 181 DCFCY 185 >F1W145.1 F1W145_9BURK DNA-3-methyladenine glycosylase Length = 194 Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 3/185 (1%) Query: 1 MSVQRCAWVNLANPRYVTYHDEEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRETYR 60 M++ RCAWV AN YV YHD+EWGVPCHDE RLFEMLNLEGAQAGLSW T+L KRETYR Sbjct: 1 MTLPRCAWVPPANALYVAYHDDEWGVPCHDERRLFEMLNLEGAQAGLSWSTILGKRETYR 60 Query: 61 AAFDQWNPEKIARYTDAKVAKLLADPGIVRNRLKVAATITNAQSYLRLRDEVGGLDPFLW 120 AFD W+ KIARY KVA+LLADPGIVRNRLKVAA ITNA++YL L DE GGLD +LW Sbjct: 61 LAFDDWDAHKIARYDAGKVAQLLADPGIVRNRLKVAAAITNARAYLCLCDEAGGLDAYLW 120 Query: 121 AYVDGKPIRNKWKDLSDAPAKTALSDQVSKDLLKRGFKFVGSTIIYAYLQGIGIIDDHVV 180 ++V G P+++ + AP KTALSD++SKDLLKRGFKFVGSTI+YAYLQGIG+++DH Sbjct: 121 SFVGGVPVQDA---MVPAPTKTALSDRISKDLLKRGFKFVGSTIVYAYLQGIGVVNDHAP 177 Query: 181 DCHCH 185 DC+ H Sbjct: 178 DCYLH 182 >B8GMA7.1 B8GMA7_THISH DNA-3-methyladenine glycosylase I EC=3.2.2.20 Length = 191 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 118/184 (64%), Positives = 148/184 (80%), Gaps = 1/184 (0%) Query: 5 RCAWVNLANPRYVTYHDEEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRETYRAAFD 64 RC W LA P YV YHDEEWGVP HDE LFEML LEGAQAGLSW T+L KR YRAAFD Sbjct: 8 RCPWC-LAFPEYVRYHDEEWGVPSHDEAHLFEMLILEGAQAGLSWATILKKRAAYRAAFD 66 Query: 65 QWNPEKIARYTDAKVAKLLADPGIVRNRLKVAATITNAQSYLRLRDEVGGLDPFLWAYVD 124 ++PEK+ARYT K+ KLLADPGIVRNRLKV A ++NAQ+YL+LRDE GGL P+LW +VD Sbjct: 67 GFDPEKMARYTPKKIEKLLADPGIVRNRLKVQAAVSNAQAYLKLRDERGGLAPYLWDFVD 126 Query: 125 GKPIRNKWKDLSDAPAKTALSDQVSKDLLKRGFKFVGSTIIYAYLQGIGIIDDHVVDCHC 184 G+P+ N+++ LS+ PA+T +S+ +S+DL KRGF+FVG TI YAY+Q +G+++DH++DC Sbjct: 127 GEPVVNRFRTLSEVPAQTPVSEAISRDLKKRGFRFVGPTICYAYMQSVGLVNDHLIDCPS 186 Query: 185 HGRK 188 H K Sbjct: 187 HPDK 190