BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0016.0030.p         (179 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T227.1 GRPE_JANMA Protein grpE                                      250   5e-65
A4G8D3.1 GRPE_HERAR Protein grpE                                      248   2e-64
D8IYH3.1 D8IYH3_HERSS Protein grpE                                    244   4e-63
A2RPV9.1 A2RPV9_HERSE Protein grpE                                    244   4e-63
F1VUS8.1 F1VUS8_9BURK Heat shock protein GrpE                         238   3e-61

>A6T227.1 GRPE_JANMA Protein grpE
          Length = 179

 Score =  250 bits (639), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 148/179 (82%)

Query: 1   MQDTEKPAENEAVQDAQAQTQASEAVEPGLEEQLIAAEAKIAEMQDAFLRAKAEAENIRR 60
           MQD +K AE  A  +     +A+ A  P LEEQL A++  + E+QD+FLRAKAE EN RR
Sbjct: 1   MQDQDKYAEQAASIEDPVTAEAASATTPTLEEQLAASQLLVQELQDSFLRAKAEVENFRR 60

Query: 61  RAQDDISRAHKFAIEGFAESLLSVKDSLEMALKIETPSVESLKEGVDMTLKQLSAAFEKN 120
           RAQ+D++RAHKFAIEGFAE LL VKDSLEMAL++ETPSVESLKEGV+MTLKQL+AAFEKN
Sbjct: 61  RAQEDVTRAHKFAIEGFAEMLLPVKDSLEMALQVETPSVESLKEGVEMTLKQLNAAFEKN 120

Query: 121 KLLEISPEAGEKLDPMKHQAISAVPAEQEANTVVTVLQKGYTISERLLRPALVTVAQGK 179
           +LLEI P+ G+KLDPMKHQA+S VPA+QE NTVV  LQKGY I++RLLRPALVTVAQ K
Sbjct: 121 RLLEIKPQQGDKLDPMKHQAMSLVPADQEPNTVVNTLQKGYLIADRLLRPALVTVAQEK 179


>A4G8D3.1 GRPE_HERAR Protein grpE
          Length = 178

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)

Query: 1   MQDTEKPAENEAVQDAQAQTQASEAVEPGLEEQLIAAEAKIAEMQDAFLRAKAEAENIRR 60
           MQD +K AE  A  +  A   A  A+ P LEEQL A++ ++ E+QD+FLRAKAE EN RR
Sbjct: 1   MQDQDKYAEQAASMEEPASADAP-AIVPTLEEQLAASQLQVQELQDSFLRAKAENENFRR 59

Query: 61  RAQDDISRAHKFAIEGFAESLLSVKDSLEMALKIETPSVESLKEGVDMTLKQLSAAFEKN 120
           RAQ+D++RAHKFAIEGFAE+L+ VKDSLEMAL+++TPS+ SLKEGV+MTLKQLSAAFEKN
Sbjct: 60  RAQEDVTRAHKFAIEGFAEALVPVKDSLEMALQVDTPSIASLKEGVEMTLKQLSAAFEKN 119

Query: 121 KLLEISPEAGEKLDPMKHQAISAVPAEQEANTVVTVLQKGYTISERLLRPALVTVAQGK 179
           +LLEI P+ G+KLDPMKHQAIS VPA+QEANT+V+ LQKGY I++RLLRPALVTVAQ K
Sbjct: 120 RLLEIKPQQGDKLDPMKHQAISVVPADQEANTIVSTLQKGYLIADRLLRPALVTVAQEK 178


>D8IYH3.1 D8IYH3_HERSS Protein grpE
          Length = 189

 Score =  244 bits (623), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 129/135 (95%)

Query: 45  QDAFLRAKAEAENIRRRAQDDISRAHKFAIEGFAESLLSVKDSLEMALKIETPSVESLKE 104
           QDAFLRA+AE ENIRRRAQ+DI++AHKFAIEGFAESLL+VKDSLEMALKIE  S+ESLKE
Sbjct: 55  QDAFLRARAEGENIRRRAQEDIAKAHKFAIEGFAESLLAVKDSLEMALKIENASLESLKE 114

Query: 105 GVDMTLKQLSAAFEKNKLLEISPEAGEKLDPMKHQAISAVPAEQEANTVVTVLQKGYTIS 164
           GVDMTLKQLS+AFEKNKL E++P+AG+KLDPMKHQA+SAVPAEQEANTVV VLQKGY IS
Sbjct: 115 GVDMTLKQLSSAFEKNKLQEVNPQAGDKLDPMKHQAVSAVPAEQEANTVVAVLQKGYMIS 174

Query: 165 ERLLRPALVTVAQGK 179
           ERLLRPALVTVAQGK
Sbjct: 175 ERLLRPALVTVAQGK 189


>A2RPV9.1 A2RPV9_HERSE Protein grpE
          Length = 189

 Score =  244 bits (623), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 129/135 (95%)

Query: 45  QDAFLRAKAEAENIRRRAQDDISRAHKFAIEGFAESLLSVKDSLEMALKIETPSVESLKE 104
           QDAFLRA+AE ENIRRRAQ+DI++AHKFAIEGFAESLL+VKDSLEMALKIE  S+ESLKE
Sbjct: 55  QDAFLRARAEGENIRRRAQEDIAKAHKFAIEGFAESLLAVKDSLEMALKIENASLESLKE 114

Query: 105 GVDMTLKQLSAAFEKNKLLEISPEAGEKLDPMKHQAISAVPAEQEANTVVTVLQKGYTIS 164
           GVDMTLKQLS+AFEKNKL E++P+AG+KLDPMKHQA+SAVPAEQEANTVV VLQKGY IS
Sbjct: 115 GVDMTLKQLSSAFEKNKLQEVNPQAGDKLDPMKHQAVSAVPAEQEANTVVAVLQKGYMIS 174

Query: 165 ERLLRPALVTVAQGK 179
           ERLLRPALVTVAQGK
Sbjct: 175 ERLLRPALVTVAQGK 189


>F1VUS8.1 F1VUS8_9BURK Heat shock protein GrpE
          Length = 178

 Score =  238 bits (606), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 147/182 (80%), Gaps = 9/182 (4%)

Query: 1   MQDTEKPAENEAVQDAQAQT-----QASEAVEPGLEEQLIAAEAKIAEMQDAFLRAKAEA 55
           MQD EK    + V ++QA       Q     E  LE +L  AE + AEM DAFLRAKA+ 
Sbjct: 1   MQDQEK----QTVVNSQADETPVPEQEVSGAEASLESRLAEAETRAAEMHDAFLRAKADT 56

Query: 56  ENIRRRAQDDISRAHKFAIEGFAESLLSVKDSLEMALKIETPSVESLKEGVDMTLKQLSA 115
           EN RRRAQ+DI+RAHKFAIEGFAE+L+ V DSL+MAL++E+PSVESLKEGV+MTLKQL++
Sbjct: 57  ENFRRRAQEDIARAHKFAIEGFAEALVPVMDSLDMALRVESPSVESLKEGVEMTLKQLAS 116

Query: 116 AFEKNKLLEISPEAGEKLDPMKHQAISAVPAEQEANTVVTVLQKGYTISERLLRPALVTV 175
           AFE+N+L+ ++P+ GEKLDPMKHQAIS VPAEQEANT+V+VLQKGY IS+RLLRPALVTV
Sbjct: 117 AFERNRLIAVAPQPGEKLDPMKHQAISMVPAEQEANTIVSVLQKGYMISDRLLRPALVTV 176

Query: 176 AQ 177
           AQ
Sbjct: 177 AQ 178