BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0016.0024.p         (51 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYG8.1 D8IYG8_HERSS Heat-inducible transcription repressor hrcA      76   1e-12
A6T232.1 A6T232_JANMA Heat-inducible transcription repressor hrcA      76   2e-12
A4G8D9.1 A4G8D9_HERAR Heat-inducible transcription repressor hrcA      76   2e-12
F1VUS3.1 F1VUS3_9BURK Heat-inducible transcription repressor HrcA      70   8e-11

>D8IYG8.1 D8IYG8_HERSS Heat-inducible transcription repressor hrcA
          Length = 342

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/39 (94%), Positives = 39/39 (100%)

Query: 1  MQLDNRAQTLLKALVERYIADGQPVGSRALSKISGLELS 39
          MQLDNRA+TLLKALVERYIADGQPVGSRALSK+SGLELS
Sbjct: 1  MQLDNRARTLLKALVERYIADGQPVGSRALSKLSGLELS 39


>A6T232.1 A6T232_JANMA Heat-inducible transcription repressor hrcA
          Length = 342

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/39 (94%), Positives = 38/39 (97%)

Query: 1  MQLDNRAQTLLKALVERYIADGQPVGSRALSKISGLELS 39
          MQLDNRAQTLLKALVERYIADGQPVGSR LSKISGL+LS
Sbjct: 1  MQLDNRAQTLLKALVERYIADGQPVGSRELSKISGLDLS 39


>A4G8D9.1 A4G8D9_HERAR Heat-inducible transcription repressor hrcA
          Length = 342

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/39 (94%), Positives = 38/39 (97%)

Query: 1  MQLDNRAQTLLKALVERYIADGQPVGSRALSKISGLELS 39
          MQLDNRAQTLLKALVERYIADGQPVGSR LSKISGL+LS
Sbjct: 1  MQLDNRAQTLLKALVERYIADGQPVGSRELSKISGLDLS 39


>F1VUS3.1 F1VUS3_9BURK Heat-inducible transcription repressor HrcA
          Length = 340

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 1  MQLDNRAQTLLKALVERYIADGQPVGSRALSKISGLELS 39
          MQLD RAQTLLK LVERYIADGQP+GSRAL+KISGL+LS
Sbjct: 1  MQLDARAQTLLKTLVERYIADGQPLGSRALAKISGLDLS 39