BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0023.p (299 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYG8.1 D8IYG8_HERSS Heat-inducible transcription repressor hrcA 515 e-144 A6T232.1 A6T232_JANMA Heat-inducible transcription repressor hrcA 506 e-141 F1VUS3.1 F1VUS3_9BURK Heat-inducible transcription repressor HrcA 501 e-140 A4G8D9.1 A4G8D9_HERAR Heat-inducible transcription repressor hrcA 501 e-140 C3XCU4.1 C3XCU4_OXAFO Heat-inducible transcription repressor hrcA 459 e-127 >D8IYG8.1 D8IYG8_HERSS Heat-inducible transcription repressor hrcA Length = 342 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 257/297 (86%), Positives = 278/297 (93%), Gaps = 5/297 (1%) Query: 1 MADLEEMGFVASPHTSAGRIPTPRGYRVFVDTLLTIESMDAIDEATLETKLQSRSQIN-S 59 MADLEEMGFVASPHTSAGR+PTPRGYR+FVDTLLT+E AIDE+ LE +LQ+R Q + S Sbjct: 47 MADLEEMGFVASPHTSAGRVPTPRGYRMFVDTLLTVE---AIDESALEGRLQARLQHSTS 103 Query: 60 PQKIISNAAQVLSSLSQFAGVVMTPKRESIFKQIEFLRLSEKRILLVIVGPGGDVQNRLL 119 PQKII+NAAQVLSSLSQFAGVVMTPKRES+F+QIEFLRLSEKRILLVIV GGDVQNR+L Sbjct: 104 PQKIITNAAQVLSSLSQFAGVVMTPKRESVFQQIEFLRLSEKRILLVIVDQGGDVQNRML 163 Query: 120 LTEVDYTPSQLVQAANYINQHYGGLGFDEVRLRLQNELRQLRDDMTSLMQAAVEAGSDAM 179 LTEVDYTPSQL QAANYINQHY G FD+VR+ LQ ELRQLRDDMT+LMQAAVEAGSDAM Sbjct: 164 LTEVDYTPSQLTQAANYINQHYAGQSFDQVRMHLQGELRQLRDDMTALMQAAVEAGSDAM 223 Query: 180 ADESD-NVVISGERNLLSVSDLSSNMTSLRKLFDMFEQKTSLMQLLDVSSKATGVQIFIG 238 ++E+D NVVISGERNLLSV+DLSSNM SLR+LFDMFEQKT L+QLLDVSSKATGVQIFIG Sbjct: 224 SEEADNNVVISGERNLLSVTDLSSNMNSLRRLFDMFEQKTGLLQLLDVSSKATGVQIFIG 283 Query: 239 GESQLVPMDDMSIVTAPYEVNGKIVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS 295 GESQLVPMDDMSIVTAPYEVNG+IVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS Sbjct: 284 GESQLVPMDDMSIVTAPYEVNGRIVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS 340 >A6T232.1 A6T232_JANMA Heat-inducible transcription repressor hrcA Length = 342 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 247/295 (83%), Positives = 274/295 (92%), Gaps = 3/295 (1%) Query: 1 MADLEEMGFVASPHTSAGRIPTPRGYRVFVDTLLTIESMDAIDEATLETKLQSRSQINSP 60 MADLEEMGFVASPHTSAGR+PTPRGYRVFVDTLLT++S IDE+ LE+KLQ+ Q S Sbjct: 47 MADLEEMGFVASPHTSAGRVPTPRGYRVFVDTLLTVQS---IDESALESKLQTSLQTGSS 103 Query: 61 QKIISNAAQVLSSLSQFAGVVMTPKRESIFKQIEFLRLSEKRILLVIVGPGGDVQNRLLL 120 QKIISNAAQ+LSSLS+FAG+VMTP+ ES+F+QI+FLRLSEKRILLVIV P GDVQNRLLL Sbjct: 104 QKIISNAAQILSSLSEFAGIVMTPRHESVFQQIDFLRLSEKRILLVIVSPSGDVQNRLLL 163 Query: 121 TEVDYTPSQLVQAANYINQHYGGLGFDEVRLRLQNELRQLRDDMTSLMQAAVEAGSDAMA 180 T+VDY+PSQL+QAANYINQ+YGGL FDEVR+RLQ EL+QLRDDMT LMQAAVEAGSDAM Sbjct: 164 TDVDYSPSQLIQAANYINQNYGGLSFDEVRIRLQGELKQLRDDMTRLMQAAVEAGSDAMN 223 Query: 181 DESDNVVISGERNLLSVSDLSSNMTSLRKLFDMFEQKTSLMQLLDVSSKATGVQIFIGGE 240 D SD+VVISGERNLLSVSDLSSNM SLR+LFD+FEQKTSLMQLLDVS+KATGVQIFIGGE Sbjct: 224 DNSDDVVISGERNLLSVSDLSSNMVSLRQLFDLFEQKTSLMQLLDVSNKATGVQIFIGGE 283 Query: 241 SQLVPMDDMSIVTAPYEVNGKIVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS 295 S LVPMD MS+VT+PY VNGK+VGTLGVIGPTRMAYERVIPIVDITAKLLS+ALS Sbjct: 284 SNLVPMDQMSVVTSPYTVNGKVVGTLGVIGPTRMAYERVIPIVDITAKLLSNALS 338 >F1VUS3.1 F1VUS3_9BURK Heat-inducible transcription repressor HrcA Length = 340 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 242/295 (82%), Positives = 273/295 (92%), Gaps = 3/295 (1%) Query: 1 MADLEEMGFVASPHTSAGRIPTPRGYRVFVDTLLTIESMDAIDEATLETKLQSRSQINSP 60 MADLEEMGFV+SPHTSAGR+PTPRGYR+FVDTLLT+ DAIDE+ LE+++QSR Q S Sbjct: 47 MADLEEMGFVSSPHTSAGRVPTPRGYRIFVDTLLTV---DAIDESLLESRMQSRIQSGSS 103 Query: 61 QKIISNAAQVLSSLSQFAGVVMTPKRESIFKQIEFLRLSEKRILLVIVGPGGDVQNRLLL 120 QK+I+NAAQVLSSLSQFAGVV+TP+RES+F+QIEFLRLSEKR+LLVIV P GDVQNRLLL Sbjct: 104 QKVIANAAQVLSSLSQFAGVVLTPRRESVFQQIEFLRLSEKRVLLVIVAPNGDVQNRLLL 163 Query: 121 TEVDYTPSQLVQAANYINQHYGGLGFDEVRLRLQNELRQLRDDMTSLMQAAVEAGSDAMA 180 +EVDYTP+QLVQAAN+IN HYGGL F +VR RLQNELRQLRDDMT LM AAVE GSDAMA Sbjct: 164 SEVDYTPAQLVQAANFINLHYGGLSFSDVRNRLQNELRQLRDDMTPLMHAAVEVGSDAMA 223 Query: 181 DESDNVVISGERNLLSVSDLSSNMTSLRKLFDMFEQKTSLMQLLDVSSKATGVQIFIGGE 240 D SD +VISGERNLLSVSDLSSNM SLRKLFD+FEQKTSL+QLLD+S++ATGVQIFIGGE Sbjct: 224 DNSDEIVISGERNLLSVSDLSSNMNSLRKLFDLFEQKTSLLQLLDLSNRATGVQIFIGGE 283 Query: 241 SQLVPMDDMSIVTAPYEVNGKIVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS 295 S LVP++ MSIVTAPYE+NG++VGTLGVIGPTRMAYERVIPIVDITAKLLS+ALS Sbjct: 284 SSLVPLEQMSIVTAPYEINGRVVGTLGVIGPTRMAYERVIPIVDITAKLLSNALS 338 >A4G8D9.1 A4G8D9_HERAR Heat-inducible transcription repressor hrcA Length = 342 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 244/295 (82%), Positives = 274/295 (92%), Gaps = 3/295 (1%) Query: 1 MADLEEMGFVASPHTSAGRIPTPRGYRVFVDTLLTIESMDAIDEATLETKLQSRSQINSP 60 MADLEEMGFVASPHTSAGR+PTPRGYRVFVDTLLT+++ IDE+ LE+KLQ+ Q S Sbjct: 47 MADLEEMGFVASPHTSAGRVPTPRGYRVFVDTLLTVQT---IDESALESKLQATLQTGSQ 103 Query: 61 QKIISNAAQVLSSLSQFAGVVMTPKRESIFKQIEFLRLSEKRILLVIVGPGGDVQNRLLL 120 KII+NAA +LSSLS+FAG+V+TP+RES+F+QI+FLRLSEKRILLVIVGPGGDVQNRLLL Sbjct: 104 HKIIANAAGILSSLSEFAGIVITPRRESVFQQIDFLRLSEKRILLVIVGPGGDVQNRLLL 163 Query: 121 TEVDYTPSQLVQAANYINQHYGGLGFDEVRLRLQNELRQLRDDMTSLMQAAVEAGSDAMA 180 T+VDY+P+QLVQAANYINQ+YGGL FD+VR+RLQ EL+ LRDDMT LMQAAVEAGSDAM Sbjct: 164 TDVDYSPTQLVQAANYINQNYGGLSFDDVRIRLQGELKALRDDMTRLMQAAVEAGSDAMN 223 Query: 181 DESDNVVISGERNLLSVSDLSSNMTSLRKLFDMFEQKTSLMQLLDVSSKATGVQIFIGGE 240 D SD+VVISGERNLLSVSDLSSNM SLRKLFD+FEQKTSLMQLL+VSSKATGVQIFIGGE Sbjct: 224 DNSDDVVISGERNLLSVSDLSSNMVSLRKLFDLFEQKTSLMQLLEVSSKATGVQIFIGGE 283 Query: 241 SQLVPMDDMSIVTAPYEVNGKIVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS 295 S LVPMD MS+VTAPY VNG++VGTLGVIGPTRMAYERVIPIVDITAKLLS+ALS Sbjct: 284 SNLVPMDQMSVVTAPYTVNGQVVGTLGVIGPTRMAYERVIPIVDITAKLLSNALS 338 >C3XCU4.1 C3XCU4_OXAFO Heat-inducible transcription repressor hrcA Length = 340 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 219/295 (74%), Positives = 263/295 (89%), Gaps = 3/295 (1%) Query: 1 MADLEEMGFVASPHTSAGRIPTPRGYRVFVDTLLTIESMDAIDEATLETKLQSRSQINSP 60 MADLEEMGFV+SPHTSAGRIPTPRGYRVFVDTLLT++ + E +E+ LQ Q+ P Sbjct: 47 MADLEEMGFVSSPHTSAGRIPTPRGYRVFVDTLLTVQ---PVSENAIESNLQLSPQLGKP 103 Query: 61 QKIISNAAQVLSSLSQFAGVVMTPKRESIFKQIEFLRLSEKRILLVIVGPGGDVQNRLLL 120 QKIISNAAQ+LSSL+QFAGVV++P+ ES F+QIEFLRLSEKRILLVIV P GDVQNRLLL Sbjct: 104 QKIISNAAQMLSSLTQFAGVVLSPQHESAFQQIEFLRLSEKRILLVIVTPDGDVQNRLLL 163 Query: 121 TEVDYTPSQLVQAANYINQHYGGLGFDEVRLRLQNELRQLRDDMTSLMQAAVEAGSDAMA 180 TEVDYTPSQL +AANYIN Y GL F+E+RLRLQ+EL+++ D++ LMQ A+EAG +A++ Sbjct: 164 TEVDYTPSQLNEAANYINSQYNGLSFNEIRLRLQSELKEIHSDLSKLMQTAIEAGDEAVS 223 Query: 181 DESDNVVISGERNLLSVSDLSSNMTSLRKLFDMFEQKTSLMQLLDVSSKATGVQIFIGGE 240 D S++VVI+GE NLLSV+D + ++ SLRKLFDMFEQKT+LMQLLDVSSKA+G+QI+IGGE Sbjct: 224 DNSEDVVIAGENNLLSVNDFAYDIHSLRKLFDMFEQKTALMQLLDVSSKASGIQIYIGGE 283 Query: 241 SQLVPMDDMSIVTAPYEVNGKIVGTLGVIGPTRMAYERVIPIVDITAKLLSSALS 295 SQL+PMDDMS+VTAPY+VNGKIVGTLGVIGPTRMAY++VIPIVDITA+LLS+ALS Sbjct: 284 SQLLPMDDMSVVTAPYQVNGKIVGTLGVIGPTRMAYQKVIPIVDITARLLSNALS 338