BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0019.p (230 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IYG4.1 D8IYG4_HERSS Biopolymer transport transmembrane protein 400 e-110 A6T236.1 A6T236_JANMA MotA/TolQ/ExbB proton channel family protein 372 e-101 A4G8E3.1 A4G8E3_HERAR Putative biopolymer transport ExbB protein 370 e-101 B2SYN8.1 B2SYN8_BURPP MotA/TolQ/ExbB proton channel 233 1e-59 A1K326.1 A1K326_AZOSB Probable biopolymer transport protein ExbB 233 2e-59 >D8IYG4.1 D8IYG4_HERSS Biopolymer transport transmembrane protein Length = 231 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/227 (85%), Positives = 214/227 (94%), Gaps = 1/227 (0%) Query: 1 MEQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAP 60 MEQ +GFAHYWAQGDAVSH+VAY+LL+MS+ASWYYILSK W++WRIRRGSNALE FW+AP Sbjct: 1 MEQNIGFAHYWAQGDAVSHSVAYLLLIMSIASWYYILSKAWAAWRIRRGSNALERFWQAP 60 Query: 61 TLTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQN-TPSLNAATDPGELITRTLRREIN 119 TL DA A M+ +DSE+I+TP+A+R++EAA I ++Q TPSLNAATDPGELITRTLRREIN Sbjct: 61 TLADATAAMQRLDSEQIYTPMAERAAEAADIGTRQQGTPSLNAATDPGELITRTLRREIN 120 Query: 120 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIM 179 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHAL AVSASGTVQIDKVAGPVGEALIM Sbjct: 121 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIM 180 Query: 180 TALGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVG 226 TALGL+VAIPAVLAYNAFTR+NR+ LAELDGFAHDLHAYLTTGERVG Sbjct: 181 TALGLLVAIPAVLAYNAFTRINRVVLAELDGFAHDLHAYLTTGERVG 227 >A6T236.1 A6T236_JANMA MotA/TolQ/ExbB proton channel family protein Length = 230 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/226 (80%), Positives = 201/226 (88%), Gaps = 2/226 (0%) Query: 2 EQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAPT 61 +Q +G AHYWAQGDAVSH+VAYVLL+MS+ SWYYILSK WSSWRIR+ + AL+GFW+APT Sbjct: 7 DQGLGLAHYWAQGDAVSHSVAYVLLIMSILSWYYILSKAWSSWRIRKSAAALDGFWQAPT 66 Query: 62 LTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTPSLNAATDPGELITRTLRREINRV 121 LTDAIA +R DSE ++TPLA +S EAA I N SLNA TDPGELITRTLR+EINRV Sbjct: 67 LTDAIATIRRSDSENVYTPLAAQSVEAANIKPHAN--SLNANTDPGELITRTLRQEINRV 124 Query: 122 SARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIMTA 181 S+RLE GLTLLASVGSTAPF+GLFGTVWGIYHAL AVS+SGT+QIDKVAGPVGEALIMTA Sbjct: 125 SSRLETGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSSSGTIQIDKVAGPVGEALIMTA 184 Query: 182 LGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVGK 227 LGL VAIPAVLAYNAFTR+NR+TLAELD FAHDLHAYLTTG RVGK Sbjct: 185 LGLAVAIPAVLAYNAFTRVNRVTLAELDAFAHDLHAYLTTGARVGK 230 >A4G8E3.1 A4G8E3_HERAR Putative biopolymer transport ExbB protein Length = 230 Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/226 (80%), Positives = 199/226 (88%), Gaps = 2/226 (0%) Query: 2 EQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAPT 61 EQ +G +HYWAQGDAVSHAVAY LL+MS+ SWYYILSK WS+WRIRR + ALE FW+APT Sbjct: 7 EQGLGLSHYWAQGDAVSHAVAYALLIMSILSWYYILSKGWSAWRIRRSAAALENFWQAPT 66 Query: 62 LTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTPSLNAATDPGELITRTLRREINRV 121 L DAIA +R DSE ++TPLA +S EAA I+ N SLNA TDPGELITRTLR+EINRV Sbjct: 67 LPDAIAAIRLTDSENVYTPLAAQSVEAANITPHAN--SLNANTDPGELITRTLRQEINRV 124 Query: 122 SARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIMTA 181 S+RLE GLTLLASVGSTAPF+GLFGTVWGIYHAL AVSASGTVQIDKVAGPVGEALIMTA Sbjct: 125 SSRLENGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIMTA 184 Query: 182 LGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVGK 227 LGL VAIPAVLAYNAFTR+NR+TLAELD FAHDLHAYLTTG RVGK Sbjct: 185 LGLAVAIPAVLAYNAFTRVNRITLAELDAFAHDLHAYLTTGTRVGK 230 >B2SYN8.1 B2SYN8_BURPP MotA/TolQ/ExbB proton channel Length = 238 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/232 (53%), Positives = 158/232 (68%), Gaps = 6/232 (2%) Query: 1 MEQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRR-GSNALEGFWKA 59 M + G HY DA++H VAYVLL MS+ASW +++ K+W R +R + A+ FW+A Sbjct: 1 MAGSSGIIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWILTRAKRQATRAIALFWQA 60 Query: 60 PTLTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTP-SLNAATDPGELITRTLRREI 118 PTL++ +A ++ D E +FTPLA EAA +S+ + P +L A + GE + R LR+ + Sbjct: 61 PTLSEGVAALKRADRERVFTPLA----EAALHASEVDIPGALLARVERGERVLRALRQAL 116 Query: 119 NRVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALI 178 + RLE G LLASVGSTAPFVGL GTVWGIYHAL +++ASG QI+ VAGPVGEALI Sbjct: 117 SASQRRLEFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALI 176 Query: 179 MTALGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVGKGEA 230 MTA GLVVAIPAVLAYN R+ R ELDGFAHDLHAY+ G +A Sbjct: 177 MTAFGLVVAIPAVLAYNVLGRMVRQLSEELDGFAHDLHAYVCAPAEQGHTQA 228 >A1K326.1 A1K326_AZOSB Probable biopolymer transport protein ExbB Length = 253 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 QTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAPTL 62 Q GFAH W Q DA+ VA +LL MSV SWY IL + R RR +A++ FW A L Sbjct: 5 QAFGFAHLWGQSDAIIRTVAILLLAMSVTSWYLILVRALRQLRARRSIDAVDAFWAASDL 64 Query: 63 TDAIAVMRTVDSEEIFTPLAQRSSEAAG-ISSKQNTPSLNAATDPGELITRTLRREINRV 121 + + ++ + F LA++ + AA + + +L D E ITR LR+ I+ Sbjct: 65 SQGLKRLQDQAPDSPFDDLARQGAAAADHVRRHTHQETLGGKLDADEFITRALRKSISLS 124 Query: 122 SARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIMTA 181 +ARLE GLT+LAS+GSTAPFVGLFGTVWGIYHAL +SASG +DKVAGPVGEALIMTA Sbjct: 125 TARLEAGLTMLASIGSTAPFVGLFGTVWGIYHALVNISASGMATLDKVAGPVGEALIMTA 184 Query: 182 LGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERV 225 GL VAIPAVLAYNAFTR NR+ L+ELD FAHDLHA+ +TG R+ Sbjct: 185 FGLFVAIPAVLAYNAFTRANRVELSELDAFAHDLHAWFSTGARI 228