BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0016.0013.p         (163 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IYF9.1 D8IYF9_HERSS ABC-type spermidine/putrescine transport s...   285   2e-75
E0M273.1 E0M273_9ENTR Binding-protein-dependent transport system...   220   4e-56
C3K7X5.1 C3K7X5_PSEFS Putative ABC transport system, membrane pr...   220   6e-56
E1SAL7.1 E1SAL7_PANVC Putative ABC transport system, permease co...   219   8e-56
A9HVZ8.1 A9HVZ8_BORPD ABC transporter, permease protein               219   8e-56

>D8IYF9.1 D8IYF9_HERSS ABC-type spermidine/putrescine transport system,
           permease component II protein
          Length = 267

 Score =  285 bits (728), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 143/163 (87%), Positives = 150/163 (92%)

Query: 1   MMPVAVPGLATSLALIMAYGQYRAFRGSLLFILVGHVLFTLPFMVRPVLAVMQSSQLAVL 60
           MMPVAVPGLAT+LALIMAYGQYR FR SL FILVGHV+FTLPFMVRPVLAVMQSSQLA L
Sbjct: 105 MMPVAVPGLATALALIMAYGQYREFRASLWFILVGHVIFTLPFMVRPVLAVMQSSQLAQL 164

Query: 61  EEAAASLGAGMRQRFFGVVIPNAASGILAGALMVVTLSIGEFNITWMLHTPLTMTLPVGL 120
           EEAAASLGAG  +RFFG+VIPNAASGILAGALMVVTLSIGEFNITWMLHTPLT TLPVGL
Sbjct: 165 EEAAASLGAGRMRRFFGIVIPNAASGILAGALMVVTLSIGEFNITWMLHTPLTQTLPVGL 224

Query: 121 ADAYASMRLEVGSAYTLIFLLMIVPLLVAMQWATQTTRTRVRL 163
           ADAYASMRLEVGSAYTLIF  MI+PLL+ MQWATQ TR +V L
Sbjct: 225 ADAYASMRLEVGSAYTLIFFFMIIPLLIGMQWATQATRKKVSL 267


>E0M273.1 E0M273_9ENTR Binding-protein-dependent transport systems inner
           membrane component
          Length = 271

 Score =  220 bits (561), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 124/143 (86%)

Query: 1   MMPVAVPGLATSLALIMAYGQYRAFRGSLLFILVGHVLFTLPFMVRPVLAVMQSSQLAVL 60
           M+PVA+PGLAT+L +I+ YGQ+ A R S LFIL+GHVLFTLPFM+RPVL+VMQ+  L  L
Sbjct: 102 MLPVALPGLATALGIILLYGQFSALRDSWLFILIGHVLFTLPFMIRPVLSVMQAIDLPRL 161

Query: 61  EEAAASLGAGMRQRFFGVVIPNAASGILAGALMVVTLSIGEFNITWMLHTPLTMTLPVGL 120
           EEAAASLGA   +RFF VV+PN  +GILAGA MV+TLS+GEFNITWMLHTPLT TLPVGL
Sbjct: 162 EEAAASLGASFWRRFFTVVVPNCRNGILAGAFMVITLSVGEFNITWMLHTPLTKTLPVGL 221

Query: 121 ADAYASMRLEVGSAYTLIFLLMI 143
           AD+Y SMRLEVGSAYTLIF++MI
Sbjct: 222 ADSYTSMRLEVGSAYTLIFIMMI 244


>C3K7X5.1 C3K7X5_PSEFS Putative ABC transport system, membrane protein
          Length = 264

 Score =  220 bits (560), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 113/150 (75%), Positives = 134/150 (89%)

Query: 2   MPVAVPGLATSLALIMAYGQYRAFRGSLLFILVGHVLFTLPFMVRPVLAVMQSSQLAVLE 61
           +PVA+PGLA++LAL++ YGQ+ +FR S +FILVGHVLFTLPF+VRPV+AVMQ  QL VLE
Sbjct: 103 LPVAMPGLASALALLLTYGQFGSFRSSWVFILVGHVLFTLPFLVRPVMAVMQRQQLPVLE 162

Query: 62  EAAASLGAGMRQRFFGVVIPNAASGILAGALMVVTLSIGEFNITWMLHTPLTMTLPVGLA 121
           EAAASLGAG  +RFF VV+PN  +GILAG LMVVTLS+GEFN+TWMLHTP+T TLPVGLA
Sbjct: 163 EAAASLGAGPIKRFFSVVVPNCRAGILAGVLMVVTLSLGEFNLTWMLHTPMTKTLPVGLA 222

Query: 122 DAYASMRLEVGSAYTLIFLLMIVPLLVAMQ 151
           D+YAS RLE+ SAYTLIFLLMIVPLL+A+Q
Sbjct: 223 DSYASARLEIASAYTLIFLLMIVPLLIALQ 252


>E1SAL7.1 E1SAL7_PANVC Putative ABC transport system, permease component
          Length = 278

 Score =  219 bits (559), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 124/143 (86%)

Query: 1   MMPVAVPGLATSLALIMAYGQYRAFRGSLLFILVGHVLFTLPFMVRPVLAVMQSSQLAVL 60
           M+PVA+PGLAT+L +I+ YGQ+ A R S LFIL+GHVLFTLPFM+RPVL+VMQ+  L  L
Sbjct: 109 MLPVALPGLATALGIILLYGQFSALRDSWLFILIGHVLFTLPFMIRPVLSVMQAIDLPRL 168

Query: 61  EEAAASLGAGMRQRFFGVVIPNAASGILAGALMVVTLSIGEFNITWMLHTPLTMTLPVGL 120
           EEAAASLGA   +RFF VV+PN  +GILAGA MV+TLS+GEFNITWMLHTPLT TLPVGL
Sbjct: 169 EEAAASLGASFWRRFFTVVVPNCRNGILAGAFMVITLSVGEFNITWMLHTPLTKTLPVGL 228

Query: 121 ADAYASMRLEVGSAYTLIFLLMI 143
           AD+Y SMRLEVGSAYTLIF++MI
Sbjct: 229 ADSYTSMRLEVGSAYTLIFIMMI 251


>A9HVZ8.1 A9HVZ8_BORPD ABC transporter, permease protein
          Length = 273

 Score =  219 bits (559), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 128/151 (84%)

Query: 2   MPVAVPGLATSLALIMAYGQYRAFRGSLLFILVGHVLFTLPFMVRPVLAVMQSSQLAVLE 61
           +PVAVPGLA++LALI+++G  R  RGS+ FI++GHVLFTLPFMVR   A M  + LA L+
Sbjct: 104 LPVAVPGLASALALIVSWGTVRGLRGSIWFIVIGHVLFTLPFMVRAARASMHGADLATLD 163

Query: 62  EAAASLGAGMRQRFFGVVIPNAASGILAGALMVVTLSIGEFNITWMLHTPLTMTLPVGLA 121
           EAAA+LGA   QRF  +V+PNAASGI+ GAL V+TLSIGEFN+TW+LHTPLT TLPVGLA
Sbjct: 164 EAAATLGASRAQRFLQIVVPNAASGIVTGALTVLTLSIGEFNLTWLLHTPLTKTLPVGLA 223

Query: 122 DAYASMRLEVGSAYTLIFLLMIVPLLVAMQW 152
           D+YASMRLE+ SAYTL+FLLM+VPLLV +QW
Sbjct: 224 DSYASMRLEIASAYTLVFLLMLVPLLVGLQW 254