BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0067.p         (88 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IT94.1 D8IT94_HERSS Oxidative stress resistance two component ...   174   5e-42
A4G6C0.1 A4G6C0_HERAR Transcriptional regulatory protein OmpR         169   9e-41
A6SXV6.1 A6SXV6_JANMA Oxidative stress resistance two-components...   169   9e-41
F1W040.1 F1W040_9BURK Two-component system response regulator OmpR    164   5e-39
F2LEM0.1 F2LEM0_BURGA Putative uncharacterized protein                152   2e-35

>D8IT94.1 D8IT94_HERSS Oxidative stress resistance two component response
           regulator protein
          Length = 253

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 84/88 (95%), Positives = 86/88 (97%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK G+T+ LTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL
Sbjct: 166 LKKNGDTISLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 225

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDPANPLYIQTVWGLGYVFIPEGKPR
Sbjct: 226 IEPDPANPLYIQTVWGLGYVFIPEGKPR 253


>A4G6C0.1 A4G6C0_HERAR Transcriptional regulatory protein OmpR
          Length = 255

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 85/88 (96%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK  ETVPLTTGEFSVLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKL
Sbjct: 168 LKKNDETVPLTTGEFSVLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKL 227

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDP+ PLYIQTVWGLGYVFIPEGKPR
Sbjct: 228 IEPDPSTPLYIQTVWGLGYVFIPEGKPR 255


>A6SXV6.1 A6SXV6_JANMA Oxidative stress resistance two-components response
           regulator
          Length = 248

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 85/88 (96%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK  ETVPLTTGEFSVLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKL
Sbjct: 161 LKKNDETVPLTTGEFSVLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKL 220

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDP+ PLYIQTVWGLGYVFIPEGKPR
Sbjct: 221 IEPDPSTPLYIQTVWGLGYVFIPEGKPR 248


>F1W040.1 F1W040_9BURK Two-component system response regulator OmpR
          Length = 253

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/88 (89%), Positives = 85/88 (96%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK G +V LTTGEFSVLKVFAR+ARQPLSREKLMEMARGREYEV+DRSLDVQISRLRKL
Sbjct: 166 LKKSGVSVALTTGEFSVLKVFARHARQPLSREKLMEMARGREYEVYDRSLDVQISRLRKL 225

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDP++PLYIQTVWGLGYVFIPEG+PR
Sbjct: 226 IEPDPSSPLYIQTVWGLGYVFIPEGQPR 253


>F2LEM0.1 F2LEM0_BURGA Putative uncharacterized protein
          Length = 244

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/85 (84%), Positives = 79/85 (92%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           L K G+ +PLTTGEFSVLKVFAR+ RQPLSREKLME+ARGREYEVFDRSLDVQISRLRKL
Sbjct: 158 LTKSGQEIPLTTGEFSVLKVFARHPRQPLSREKLMELARGREYEVFDRSLDVQISRLRKL 217

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEG 85
           IEPDP +P +IQTVWGLGYVFIP+G
Sbjct: 218 IEPDPGSPRFIQTVWGLGYVFIPDG 242