BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0062.p (217 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IT97.1 D8IT97_HERSS ABC-type amino acid transport/signal trans... 358 3e-97 B0RKF1.1 B0RKF1_HERSE Periplasmic component protein 358 3e-97 F1W2K0.1 F1W2K0_9BURK Putative amino acid ABC transporter, perip... 313 7e-84 Q2SVL8.1 Q2SVL8_BURTA Amino acid ABC transporter, periplasmic am... 287 7e-76 E1T651.1 E1T651_BURSG Extracellular solute-binding protein family 3 283 1e-74 >D8IT97.1 D8IT97_HERSS ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein Length = 267 Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 182/209 (87%), Positives = 196/209 (93%), Gaps = 7/209 (3%) Query: 12 LLAGL---LLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSELTGFE 68 LLAG+ LLA+S+S + AADLL +VK+ GTLKVALEGNYPPFNFKDPKT ELTGFE Sbjct: 9 LLAGVGAALLASSLSVS----AADLLQSVKSSGTLKVALEGNYPPFNFKDPKTGELTGFE 64 Query: 69 VDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS 128 VDVAKLLAA+LG+KP FTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS Sbjct: 65 VDVAKLLAAKLGVKPVFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS 124 Query: 129 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLSDLAS 188 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAK+VPGIDV+TYPGSPEYL+DLA+ Sbjct: 125 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKAVPGIDVRTYPGSPEYLADLAA 184 Query: 189 GRIDAALNDSLLVGYLLKSSNLPLKGGSP 217 GRIDAALNDSLLVGY+LKS+NLPLK GSP Sbjct: 185 GRIDAALNDSLLVGYILKSTNLPLKAGSP 213 >B0RKF1.1 B0RKF1_HERSE Periplasmic component protein Length = 267 Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 182/209 (87%), Positives = 196/209 (93%), Gaps = 7/209 (3%) Query: 12 LLAGL---LLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSELTGFE 68 LLAG+ LLA+S+S + AADLL +VK+ GTLKVALEGNYPPFNFKDPKT ELTGFE Sbjct: 9 LLAGVGAALLASSLSVS----AADLLQSVKSSGTLKVALEGNYPPFNFKDPKTGELTGFE 64 Query: 69 VDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS 128 VDVAKLLAA+LG+KP FTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS Sbjct: 65 VDVAKLLAAKLGVKPVFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS 124 Query: 129 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLSDLAS 188 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAK+VPGIDV+TYPGSPEYL+DLA+ Sbjct: 125 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKAVPGIDVRTYPGSPEYLADLAA 184 Query: 189 GRIDAALNDSLLVGYLLKSSNLPLKGGSP 217 GRIDAALNDSLLVGY+LKS+NLPLK GSP Sbjct: 185 GRIDAALNDSLLVGYILKSTNLPLKAGSP 213 >F1W2K0.1 F1W2K0_9BURK Putative amino acid ABC transporter, periplasmic-binding protein Length = 268 Score = 313 bits (803), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 149/211 (70%), Positives = 183/211 (86%), Gaps = 3/211 (1%) Query: 7 RKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSELTG 66 +KL+ L+ LL + V V AHAADLL TV+ARGTLKV +EG YPPFNF+D T L+G Sbjct: 7 KKLAGLMTALLFSGLV---VPAHAADLLATVQARGTLKVGVEGTYPPFNFRDTTTRALSG 63 Query: 67 FEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYT 126 FE+DVA+LLAA++GLKPEFTT EWSGILAGL AGKYDVI+NQVGIT +R+ +FDFSDPYT Sbjct: 64 FEIDVARLLAAKMGLKPEFTTIEWSGILAGLSAGKYDVILNQVGITPQREASFDFSDPYT 123 Query: 127 LSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLSDL 186 SSAQLIVRK+E+R+F SL+DLKGKKLG+GQGTN+E++AK+V G+DVK+YPG+PEYL DL Sbjct: 124 RSSAQLIVRKNEQRQFTSLDDLKGKKLGVGQGTNYEERAKAVAGVDVKSYPGAPEYLQDL 183 Query: 187 ASGRIDAALNDSLLVGYLLKSSNLPLKGGSP 217 A+GR+DAALNDSL+V YLLK+S LP+K G+P Sbjct: 184 AAGRVDAALNDSLMVSYLLKASPLPIKAGAP 214 >Q2SVL8.1 Q2SVL8_BURTA Amino acid ABC transporter, periplasmic amino acid-binding protein Length = 264 Score = 287 bits (734), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 144/216 (66%), Positives = 177/216 (81%), Gaps = 5/216 (2%) Query: 1 MAFTSFRKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPK 60 M S +KL L+AGL+ A+ V+AT AHAADLLD VK RGTL++ LEG +PPFN K+P+ Sbjct: 1 MKIASLKKL--LVAGLIGASFVAAT--AHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQ 56 Query: 61 TSELTGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFD 120 EL GF+VD+AK +AA+LG+KPEF TTEWSGI+AGL AGK+DVI+NQVGITD+R++ D Sbjct: 57 -GELVGFDVDIAKAIAAKLGVKPEFVTTEWSGIIAGLQAGKFDVIVNQVGITDQRKQTLD 115 Query: 121 FSDPYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSP 180 FS YT SSAQLI RKD+ R+FKSLEDLKGKKLG+ GTN+ AKSVPGIDVKTYPG+P Sbjct: 116 FSPAYTYSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMAKSVPGIDVKTYPGAP 175 Query: 181 EYLSDLASGRIDAALNDSLLVGYLLKSSNLPLKGGS 216 EYL DLA+GR+DAALND L++ YL K+S LPL+ G+ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNSQLPLRPGA 211 >E1T651.1 E1T651_BURSG Extracellular solute-binding protein family 3 Length = 264 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 142/212 (66%), Positives = 171/212 (80%), Gaps = 2/212 (0%) Query: 5 SFRKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSEL 64 R L L A L+ AS +A V AHA DLLD VK RGTL+V LEG +PPFN K P + EL Sbjct: 2 QLRLLKKLFAVALIGASFTA-VAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAP-SGEL 59 Query: 65 TGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDP 124 G++VD+AK +AARLG+KPEF TTEWSGI+AGL AGK+DVI+NQVGITD R++A DFS Sbjct: 60 VGYDVDIAKAVAARLGVKPEFITTEWSGIIAGLQAGKFDVIVNQVGITDARKQALDFSPA 119 Query: 125 YTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLS 184 YT S+AQLI RKD+ R+FKSL+DLKGKKLG+G GTN+ AKSVPGIDVKTYPG+PEYL Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMDMAKSVPGIDVKTYPGAPEYLR 179 Query: 185 DLASGRIDAALNDSLLVGYLLKSSNLPLKGGS 216 DLA+GR+DAALND L++ YLLK+S LPL+ G+ Sbjct: 180 DLAAGRLDAALNDRLMLAYLLKNSQLPLRTGA 211