BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0057.p (375 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITA0.1 D8ITA0_HERSS Succinyl-diaminopimelate desuccinylase EC=... 712 0.0 A4G4Q7.1 DAPE_HERAR Succinyl-diaminopimelate desuccinylase EC=3.... 690 0.0 A6SZR5.1 DAPE_JANMA Succinyl-diaminopimelate desuccinylase EC=3.... 684 0.0 F1W391.1 F1W391_9BURK N-succinyl-L,L-diaminopimelate desuccinylase 671 0.0 D5NF41.1 D5NF41_9BURK Succinyl-diaminopimelate desuccinylase EC=... 588 e-166 >D8ITA0.1 D8ITA0_HERSS Succinyl-diaminopimelate desuccinylase EC=3.5.1.18 Length = 377 Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/374 (90%), Positives = 359/374 (95%) Query: 1 MSKTLALTQELIALSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 60 MSKTLALTQEL++LSSVTPEDKGCQARLAELL PLGFVCETIQSG+VTNLWARKGTAQPL Sbjct: 3 MSKTLALTQELMSLSSVTPEDKGCQARLAELLTPLGFVCETIQSGEVTNLWARKGTAQPL 62 Query: 61 LAFAGHTDVVPTGPVDKWQSPPFVPTQRDGKLFGRGASDMKTSIAAMVVAVEEFVAAHPD 120 + FAGHTDVVPTGP++KWQS PF PT R+G+L+GRGASDMKTSIAAMVVA EEF AAHPD Sbjct: 63 VVFAGHTDVVPTGPLEKWQSHPFQPTLREGRLYGRGASDMKTSIAAMVVACEEFTAAHPD 122 Query: 121 HKGSIGFLITSDEEGPATDGTVIVCNQLKARGEQLDYCIVGEPTSAKQLGDMIKNGRRGT 180 HKGSIGFLITSDEEGPA DGTV+VCN LKARGEQLDYCIVGEPTSAK LGDMIKNGRRGT Sbjct: 123 HKGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRRGT 182 Query: 181 MSGKLTVKGIQGHIAYPQLAKNPIHLAAPALAELVAEKWDEGNEYYLPTSWQISNIHGGT 240 MSGKLTVKGIQGHIAYPQLA+NPIH AAPALAELVAE+WD GNEYYLPTSWQISNIHGGT Sbjct: 183 MSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHGGT 242 Query: 241 GASNVIPGDVVIDFNFRFSTASTVDGLQQRVHAILDKHGFDYDLKWTVGGLPFLTPRGNL 300 GASNVIPG+V+IDFNFRFSTASTV+GLQQRVHAILDKHG +YDLKWTVGGLPFLTPRG+L Sbjct: 243 GASNVIPGEVMIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRGDL 302 Query: 301 SDALASAIKAETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEYIEVRYID 360 SDAL+ AIK ETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDE+IEVRYID Sbjct: 303 SDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRYID 362 Query: 361 PLKNIYRRTMENLL 374 PLKNIYR+T+ENLL Sbjct: 363 PLKNIYRKTLENLL 376 >A4G4Q7.1 DAPE_HERAR Succinyl-diaminopimelate desuccinylase EC=3.5.1.18 Length = 375 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/375 (86%), Positives = 353/375 (94%) Query: 1 MSKTLALTQELIALSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 60 MSKTLALT+ELIALSSVTPEDKGCQ+RL ELL+PLGFVCETI+S VTNLWARKGTAQPL Sbjct: 1 MSKTLALTEELIALSSVTPEDKGCQSRLIELLSPLGFVCETIESDGVTNLWARKGTAQPL 60 Query: 61 LAFAGHTDVVPTGPVDKWQSPPFVPTQRDGKLFGRGASDMKTSIAAMVVAVEEFVAAHPD 120 L FAGHTDVVPTGP+D+W SPPFVPTQRDGKL+GRGA+DMKTSIAAMVVA EEFV AHPD Sbjct: 61 LVFAGHTDVVPTGPLDQWTSPPFVPTQRDGKLYGRGAADMKTSIAAMVVAAEEFVHAHPD 120 Query: 121 HKGSIGFLITSDEEGPATDGTVIVCNQLKARGEQLDYCIVGEPTSAKQLGDMIKNGRRGT 180 HKGSIGFLITSDEEGPATDGTVIVCN LKARGEQLDYC+VGEPTS+ LGD IKNGRRG+ Sbjct: 121 HKGSIGFLITSDEEGPATDGTVIVCNALKARGEQLDYCVVGEPTSSDVLGDTIKNGRRGS 180 Query: 181 MSGKLTVKGIQGHIAYPQLAKNPIHLAAPALAELVAEKWDEGNEYYLPTSWQISNIHGGT 240 MSGKLTVKGIQGHIAYPQLA+NPIH APALAELVAEKWD+GNEYYLPTSWQ+SN+HGG Sbjct: 181 MSGKLTVKGIQGHIAYPQLARNPIHQCAPALAELVAEKWDDGNEYYLPTSWQVSNMHGGA 240 Query: 241 GASNVIPGDVVIDFNFRFSTASTVDGLQQRVHAILDKHGFDYDLKWTVGGLPFLTPRGNL 300 GASNVIPG+VVIDFNFRF TASTV+GLQQRVHAILDKHG +YDLKW++ G PFLTP+G+L Sbjct: 241 GASNVIPGNVVIDFNFRFCTASTVEGLQQRVHAILDKHGLEYDLKWSISGYPFLTPKGSL 300 Query: 301 SDALASAIKAETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEYIEVRYID 360 SDA+A AIK+ETG+ TELSTTGGTSDGRFIAQICPQV+EFGPPN SIHKIDE+IEVR+ID Sbjct: 301 SDAMADAIKSETGVTTELSTTGGTSDGRFIAQICPQVVEFGPPNGSIHKIDEHIEVRFID 360 Query: 361 PLKNIYRRTMENLLL 375 PLKNIYR TMENLLL Sbjct: 361 PLKNIYRHTMENLLL 375 >A6SZR5.1 DAPE_JANMA Succinyl-diaminopimelate desuccinylase EC=3.5.1.18 Length = 375 Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/375 (85%), Positives = 350/375 (93%) Query: 1 MSKTLALTQELIALSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 60 MSKTLALT+ELIALSSVTPEDKGCQ+RL ELL PLGFVCETI+S VTNLWARKGT QPL Sbjct: 1 MSKTLALTEELIALSSVTPEDKGCQSRLIELLEPLGFVCETIESDGVTNLWARKGTTQPL 60 Query: 61 LAFAGHTDVVPTGPVDKWQSPPFVPTQRDGKLFGRGASDMKTSIAAMVVAVEEFVAAHPD 120 L FAGHTDVVPTGP+++W SPPFVPTQR+GKL+GRGA+DMKTSIAAMVVA EEFV AHP Sbjct: 61 LVFAGHTDVVPTGPLEQWTSPPFVPTQREGKLYGRGAADMKTSIAAMVVAAEEFVQAHPA 120 Query: 121 HKGSIGFLITSDEEGPATDGTVIVCNQLKARGEQLDYCIVGEPTSAKQLGDMIKNGRRGT 180 HKGSIGFLITSDEEGPATDGTVIVCN LKARGEQLDYC+VGEPTS+ LGD IKNGRRG+ Sbjct: 121 HKGSIGFLITSDEEGPATDGTVIVCNALKARGEQLDYCVVGEPTSSDVLGDTIKNGRRGS 180 Query: 181 MSGKLTVKGIQGHIAYPQLAKNPIHLAAPALAELVAEKWDEGNEYYLPTSWQISNIHGGT 240 MSGKLTVKGIQGHIAYPQLA+NPIH APALAELVAEKWD+GNEYYLPTSWQ+SNIHGG Sbjct: 181 MSGKLTVKGIQGHIAYPQLARNPIHQCAPALAELVAEKWDDGNEYYLPTSWQVSNIHGGA 240 Query: 241 GASNVIPGDVVIDFNFRFSTASTVDGLQQRVHAILDKHGFDYDLKWTVGGLPFLTPRGNL 300 GASNVIPG+VVIDFNFRF TASTVDGLQ+RVHAILDKHG +YDLKW++ G PFLTP+G L Sbjct: 241 GASNVIPGNVVIDFNFRFCTASTVDGLQKRVHAILDKHGLEYDLKWSISGHPFLTPKGTL 300 Query: 301 SDALASAIKAETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEYIEVRYID 360 SDA++ AIK+ETG+ TELSTTGGTSDGRFIAQICPQV+EFGPPN SIHKIDE+IEVR+ID Sbjct: 301 SDAMSDAIKSETGVTTELSTTGGTSDGRFIAQICPQVVEFGPPNGSIHKIDEHIEVRFID 360 Query: 361 PLKNIYRRTMENLLL 375 PLKNIYRRTMENLLL Sbjct: 361 PLKNIYRRTMENLLL 375 >F1W391.1 F1W391_9BURK N-succinyl-L,L-diaminopimelate desuccinylase Length = 375 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/374 (83%), Positives = 345/374 (92%) Query: 1 MSKTLALTQELIALSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARKGTAQPL 60 MSKTLALT++LIALSSVTPED GCQ L LLAPLGF CE IQSG+VTNLWARKGTAQPL Sbjct: 1 MSKTLALTEKLIALSSVTPEDNGCQQHLIALLAPLGFHCEAIQSGNVTNLWARKGTAQPL 60 Query: 61 LAFAGHTDVVPTGPVDKWQSPPFVPTQRDGKLFGRGASDMKTSIAAMVVAVEEFVAAHPD 120 L FAGHTDVVPTGP+D+W SPPFVPT RDGKL+GRG++DMKTSIAAMV+AVEEF A+HPD Sbjct: 61 LVFAGHTDVVPTGPLDQWTSPPFVPTHRDGKLYGRGSADMKTSIAAMVIAVEEFTASHPD 120 Query: 121 HKGSIGFLITSDEEGPATDGTVIVCNQLKARGEQLDYCIVGEPTSAKQLGDMIKNGRRGT 180 HKGSIGFLITSDEEGPATDGT++VCN LK RGEQLDYCIVGEPT+ +QLGD IKNGRRG+ Sbjct: 121 HKGSIGFLITSDEEGPATDGTIVVCNLLKERGEQLDYCIVGEPTATEQLGDTIKNGRRGS 180 Query: 181 MSGKLTVKGIQGHIAYPQLAKNPIHLAAPALAELVAEKWDEGNEYYLPTSWQISNIHGGT 240 MSG+L V+GIQGHIAYPQLA+NPIH AAPA+AELVAEKWDE NEYYLPTSWQ+SNIH G Sbjct: 181 MSGRLVVRGIQGHIAYPQLARNPIHQAAPAIAELVAEKWDEANEYYLPTSWQVSNIHAGA 240 Query: 241 GASNVIPGDVVIDFNFRFSTASTVDGLQQRVHAILDKHGFDYDLKWTVGGLPFLTPRGNL 300 G SNVIPG++VIDFNFRFSTASTV+GLQQRV IL +HG +Y LKWTVGGLPFLTPRG L Sbjct: 241 GVSNVIPGELVIDFNFRFSTASTVEGLQQRVQEILSRHGLEYSLKWTVGGLPFLTPRGEL 300 Query: 301 SDALASAIKAETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEYIEVRYID 360 SDA+++AIK+ETGL+TELSTTGGTSDGRFIAQICPQVIE GPPN SIHKIDE++EVRYID Sbjct: 301 SDAISAAIKSETGLETELSTTGGTSDGRFIAQICPQVIEVGPPNGSIHKIDEHVEVRYID 360 Query: 361 PLKNIYRRTMENLL 374 PLKNIYR+T+ENLL Sbjct: 361 PLKNIYRKTLENLL 374 >D5NF41.1 D5NF41_9BURK Succinyl-diaminopimelate desuccinylase EC=3.5.1.18 Length = 413 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 282/378 (74%), Positives = 323/378 (85%), Gaps = 4/378 (1%) Query: 1 MSKTLALTQELIALSSVTPEDKGCQARLAELLAPLGFVCETIQSGDVTNLWARK----GT 56 MS TLALT++LIA +SVTP+D+ CQ L E LA LGF ETI+S VTNLWA K GT Sbjct: 35 MSGTLALTEQLIARASVTPDDQHCQRLLIERLAALGFEHETIESNGVTNLWAVKRGVDGT 94 Query: 57 AQPLLAFAGHTDVVPTGPVDKWQSPPFVPTQRDGKLFGRGASDMKTSIAAMVVAVEEFVA 116 A LLAFAGHTDVVPTGP+++W S PF PT RDGKL+GRGA+DMK SIA VVA EEFVA Sbjct: 95 AGKLLAFAGHTDVVPTGPLEQWHSAPFEPTHRDGKLYGRGAADMKASIAGFVVASEEFVA 154 Query: 117 AHPDHKGSIGFLITSDEEGPATDGTVIVCNQLKARGEQLDYCIVGEPTSAKQLGDMIKNG 176 AHP H+GSI FLITSDEEGPATDGT+ V L+ARGE++DYCIVGEPTS+ QLGDM+KNG Sbjct: 155 AHPAHRGSIAFLITSDEEGPATDGTIKVVEALQARGERMDYCIVGEPTSSAQLGDMVKNG 214 Query: 177 RRGTMSGKLTVKGIQGHIAYPQLAKNPIHLAAPALAELVAEKWDEGNEYYLPTSWQISNI 236 RRG+MSGKL VKG+QGHIAYP LAKNP+HL APALAELVAE+WD+GNEY+ PT+WQ+SNI Sbjct: 215 RRGSMSGKLIVKGVQGHIAYPHLAKNPVHLLAPALAELVAERWDDGNEYFPPTTWQVSNI 274 Query: 237 HGGTGASNVIPGDVVIDFNFRFSTASTVDGLQQRVHAILDKHGFDYDLKWTVGGLPFLTP 296 H GTGA+NVI G + FNFRFSTASTV+GLQ RVHAILDKH DYDL+WTV GLPFLTP Sbjct: 275 HSGTGATNVIAGHADVMFNFRFSTASTVEGLQARVHAILDKHELDYDLQWTVSGLPFLTP 334 Query: 297 RGNLSDALASAIKAETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEYIEV 356 RG+LS+ALA+AIK ETG+ TELSTTGGTSDGRFIA+ICPQVIEFGP N SIHKIDE+IEV Sbjct: 335 RGDLSNALATAIKDETGVTTELSTTGGTSDGRFIARICPQVIEFGPLNASIHKIDEHIEV 394 Query: 357 RYIDPLKNIYRRTMENLL 374 +I+PLKN+YRR +E L+ Sbjct: 395 AHIEPLKNVYRRVLEQLI 412