BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0046.p (273 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IU02.1 D8IU02_HERSS Chromosome segregation SMC ATPase protein 522 e-146 A4G4R2.2 A4G4R2_HERAR Chromosome segregation protein SMC 498 e-139 A6SZR0.1 A6SZR0_JANMA Chromosome segregation protein 482 e-134 F1VVB8.1 F1VVB8_9BURK Chromosome partition protein smc 480 e-134 B4ECN8.1 B4ECN8_BURCJ Putative chromosome partition protein 450 e-125 >D8IU02.1 D8IU02_HERSS Chromosome segregation SMC ATPase protein Length = 1176 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 252/273 (92%), Positives = 262/273 (95%) Query: 1 LQPQRDRITELQLKEQAARLNQEQFTEALANTQADEAALAEKLTDDMRPSYLQGEVTRLT 60 LQPQRDRITELQLKEQAARLNQEQF+EALA TQADEAAL+EKLT DMRPSYLQGEVTRLT Sbjct: 904 LQPQRDRITELQLKEQAARLNQEQFSEALAQTQADEAALSEKLTSDMRPSYLQGEVTRLT 963 Query: 61 NAIAALGAVNLAALDELATASERKNFLDAQYVDLNEAITTLQDAIHKIDIETRGLLQDTF 120 NAIAALGAVNLAALDELATASERK+FLDAQ+ DLNEAITTLQDAIHKID+ETR LLQDTF Sbjct: 964 NAIAALGAVNLAALDELATASERKHFLDAQHADLNEAITTLQDAIHKIDMETRDLLQDTF 1023 Query: 121 DKVNGHFAELFPILFGGGQAKLTMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 180 DKVN HF+ELFP+LFGGGQAKL MTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA Sbjct: 1024 DKVNRHFSELFPVLFGGGQAKLIMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 1083 Query: 181 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSSNTQFLFISHNKIAMEMAN 240 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERF NMVKRMS +TQFLFISHNKIAMEMA Sbjct: 1084 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFANMVKRMSDHTQFLFISHNKIAMEMAQ 1143 Query: 241 QLIGVTMQEQGVSRIVAVDMEAAANFTSEVQAA 273 QLIGVTMQEQGVSRIVAVDME+AANF+S QAA Sbjct: 1144 QLIGVTMQEQGVSRIVAVDMESAANFSSAEQAA 1176 >A4G4R2.2 A4G4R2_HERAR Chromosome segregation protein SMC Length = 1175 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 241/271 (88%), Positives = 250/271 (92%) Query: 1 LQPQRDRITELQLKEQAARLNQEQFTEALANTQADEAALAEKLTDDMRPSYLQGEVTRLT 60 LQPQRDRITELQLKEQAARLNQEQ+ + L QADEAAL EKL D+RPSYLQGEVTRLT Sbjct: 903 LQPQRDRITELQLKEQAARLNQEQYAQQLIEAQADEAALMEKLNGDLRPSYLQGEVTRLT 962 Query: 61 NAIAALGAVNLAALDELATASERKNFLDAQYVDLNEAITTLQDAIHKIDIETRGLLQDTF 120 NAIAALGAVNLAALDELATASERKNFLDAQ DL EAI TLQDAIHKID ETR LLQDTF Sbjct: 963 NAIAALGAVNLAALDELATASERKNFLDAQNADLTEAINTLQDAIHKIDKETRDLLQDTF 1022 Query: 121 DKVNGHFAELFPILFGGGQAKLTMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 180 DKVN HF ELFPILFGGGQAKL MTG+EILDSGVQVMAQPPGKKNATIHLLSGGEKALTA Sbjct: 1023 DKVNHHFGELFPILFGGGQAKLMMTGEEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 1082 Query: 181 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSSNTQFLFISHNKIAMEMAN 240 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMS++TQFLFISHNKIAMEMA Sbjct: 1083 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSAHTQFLFISHNKIAMEMAQ 1142 Query: 241 QLIGVTMQEQGVSRIVAVDMEAAANFTSEVQ 271 QLIGVTMQEQGVSRIVAVDME+A +F +E Q Sbjct: 1143 QLIGVTMQEQGVSRIVAVDMESATSFAAEAQ 1173 >A6SZR0.1 A6SZR0_JANMA Chromosome segregation protein Length = 1175 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 244/273 (89%), Positives = 253/273 (92%) Query: 1 LQPQRDRITELQLKEQAARLNQEQFTEALANTQADEAALAEKLTDDMRPSYLQGEVTRLT 60 LQPQRDRITELQLKEQAARLNQEQ+ + L +ADEAALAEKL DMRPSYLQGEVTRLT Sbjct: 903 LQPQRDRITELQLKEQAARLNQEQYAQQLLEAEADEAALAEKLNGDMRPSYLQGEVTRLT 962 Query: 61 NAIAALGAVNLAALDELATASERKNFLDAQYVDLNEAITTLQDAIHKIDIETRGLLQDTF 120 NAIAALGAVNLAALDELATASERKNFLDAQ DL EAI TLQDAI KID ETR LLQDTF Sbjct: 963 NAIAALGAVNLAALDELATASERKNFLDAQNADLTEAINTLQDAITKIDKETRDLLQDTF 1022 Query: 121 DKVNGHFAELFPILFGGGQAKLTMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 180 DKVN HF ELFPILFGGGQAKLTMTG+EILDSGVQVMAQPPGKKNATIHLLSGGEKALTA Sbjct: 1023 DKVNHHFGELFPILFGGGQAKLTMTGEEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 1082 Query: 181 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSSNTQFLFISHNKIAMEMAN 240 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMS++TQFLFISHNKIAMEMA Sbjct: 1083 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSAHTQFLFISHNKIAMEMAQ 1142 Query: 241 QLIGVTMQEQGVSRIVAVDMEAAANFTSEVQAA 273 QLIGVTMQEQGVSRIVAVDME+AA+F +E Q A Sbjct: 1143 QLIGVTMQEQGVSRIVAVDMESAADFAAEAQTA 1175 >F1VVB8.1 F1VVB8_9BURK Chromosome partition protein smc Length = 804 Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/273 (84%), Positives = 245/273 (89%) Query: 1 LQPQRDRITELQLKEQAARLNQEQFTEALANTQADEAALAEKLTDDMRPSYLQGEVTRLT 60 LQPQRDRI E QLKEQAARLNQEQF + L + QADE AL+ KL DD+RPSYLQGEVTRL Sbjct: 532 LQPQRDRIMEWQLKEQAARLNQEQFAQQLIDAQADEVALSAKLHDDLRPSYLQGEVTRLG 591 Query: 61 NAIAALGAVNLAALDELATASERKNFLDAQYVDLNEAITTLQDAIHKIDIETRGLLQDTF 120 NAI ALGAVNLAALDELA ASERKNFLDAQ DL EAI TLQDAIH+ID ETR LLQDTF Sbjct: 592 NAIIALGAVNLAALDELAVASERKNFLDAQNADLTEAIDTLQDAIHRIDKETRELLQDTF 651 Query: 121 DKVNGHFAELFPILFGGGQAKLTMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 180 DKVN HFAELFPILFGGGQA+L MTGDEILD+GVQVMAQPPGKKNATIHLLSGGEKALTA Sbjct: 652 DKVNEHFAELFPILFGGGQARLVMTGDEILDAGVQVMAQPPGKKNATIHLLSGGEKALTA 711 Query: 181 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSSNTQFLFISHNKIAMEMAN 240 TALVFSMFQLNPAPFCLLDEVDAPLDD+NTER CNMV+RM+ TQFLFISHNKIAMEMA Sbjct: 712 TALVFSMFQLNPAPFCLLDEVDAPLDDSNTERLCNMVRRMAVKTQFLFISHNKIAMEMAQ 771 Query: 241 QLIGVTMQEQGVSRIVAVDMEAAANFTSEVQAA 273 QLIGVTMQEQGVSRIVAVDME+A F ++ Q+A Sbjct: 772 QLIGVTMQEQGVSRIVAVDMESALGFATDAQSA 804 >B4ECN8.1 B4ECN8_BURCJ Putative chromosome partition protein Length = 1170 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/266 (83%), Positives = 235/266 (88%) Query: 1 LQPQRDRITELQLKEQAARLNQEQFTEALANTQADEAALAEKLTDDMRPSYLQGEVTRLT 60 LQP RDRITELQLKEQAARL+ EQF E LA + DEAALA KLT D++PSYLQGEVTRL Sbjct: 902 LQPLRDRITELQLKEQAARLSVEQFAEQLATAEVDEAALAAKLTPDLKPSYLQGEVTRLN 961 Query: 61 NAIAALGAVNLAALDELATASERKNFLDAQYVDLNEAITTLQDAIHKIDIETRGLLQDTF 120 NAI ALG VN+AALDEL ASERK FLDAQ DL +AITTL+DAIHKID ETR LLQ TF Sbjct: 962 NAINALGPVNMAALDELKAASERKVFLDAQSADLIDAITTLEDAIHKIDQETRTLLQGTF 1021 Query: 121 DKVNGHFAELFPILFGGGQAKLTMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKALTA 180 D+VN HF++LFP LFGGGQAKL MTGDEILD+GVQVMAQPPGKKNATIHLLSGGEKALTA Sbjct: 1022 DEVNRHFSDLFPRLFGGGQAKLIMTGDEILDAGVQVMAQPPGKKNATIHLLSGGEKALTA 1081 Query: 181 TALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSSNTQFLFISHNKIAMEMAN 240 TALVF+MFQLNPAPFCLLDEVDAPLDDANTERF N+V+ MS TQFLFISHNKIAMEMA Sbjct: 1082 TALVFAMFQLNPAPFCLLDEVDAPLDDANTERFANLVRAMSDKTQFLFISHNKIAMEMAQ 1141 Query: 241 QLIGVTMQEQGVSRIVAVDMEAAANF 266 QLIGVTMQEQGVSRIVAVDME AA F Sbjct: 1142 QLIGVTMQEQGVSRIVAVDMETAAGF 1167