BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0025.p         (186 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6SZP8.1 RRF_JANMA Ribosome-recycling factor                          322   1e-86
A4G4S4.1 RRF_HERAR Ribosome-recycling factor                          320   4e-86
D8IU18.1 D8IU18_HERSS Ribosome-recycling factor                       318   3e-85
F1W2N4.1 F1W2N4_9BURK Ribosome recycling factor                       318   3e-85
C3X7R5.1 C3X7R5_OXAFO Ribosome-recycling factor                       310   4e-83

>A6SZP8.1 RRF_JANMA Ribosome-recycling factor
          Length = 186

 Score =  322 bits (826), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/186 (83%), Positives = 174/186 (93%)

Query: 1   MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60
           MT+AD KK+ +QKM KSIE+L+ADLAKVRTGRAHTGILDHV V+YYG+PT LSQVAN+TL
Sbjct: 1   MTVADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLSQVANVTL 60

Query: 61  IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120
           IDARTIGVQPF+KKM+AV+EKAIREADLGLNPATQG+LIRVPTP LTEERRKEMVKLVK 
Sbjct: 61  IDARTIGVQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKS 120

Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180
           EAED KI++RNIRRDANE LKKLVK+K CSED+ERR Q++IQKLTDKFV E+DKLVVEKE
Sbjct: 121 EAEDAKIAVRNIRRDANESLKKLVKEKACSEDEERRAQDEIQKLTDKFVIEIDKLVVEKE 180

Query: 181 KEVLTV 186
           KEVLTV
Sbjct: 181 KEVLTV 186


>A4G4S4.1 RRF_HERAR Ribosome-recycling factor
          Length = 186

 Score =  320 bits (821), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 155/186 (83%), Positives = 174/186 (93%)

Query: 1   MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60
           MT+AD KK+ +QKM KSIE+L+ADLAKVRTGRAHTGILDHV V+YYG+PT L+QVAN+TL
Sbjct: 1   MTVADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLTQVANVTL 60

Query: 61  IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120
           IDARTIGVQPF+KKM+AV+EKAIR+ADLGLNPATQG++IRVPTP LTEERRKEMVKLVK 
Sbjct: 61  IDARTIGVQPFEKKMVAVVEKAIRDADLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKS 120

Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180
           EAED KI+IRNIRRDANE LKKL+KDK CSEDDERR Q++IQKLTDKFV EVDKLVVEKE
Sbjct: 121 EAEDAKIAIRNIRRDANETLKKLLKDKACSEDDERRAQDEIQKLTDKFVLEVDKLVVEKE 180

Query: 181 KEVLTV 186
           KEVLTV
Sbjct: 181 KEVLTV 186


>D8IU18.1 D8IU18_HERSS Ribosome-recycling factor
          Length = 186

 Score =  318 bits (814), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 153/186 (82%), Positives = 175/186 (94%)

Query: 1   MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60
           M++ADVKK++EQKM+KSIE+L+A+LAKVRTGRAHTG+LD V VDYYGSPT LSQVANLTL
Sbjct: 1   MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60

Query: 61  IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120
           IDARTIGVQP++KKM+AV+EKAIREADLGLNPAT G+LIRVP P LTEERRKEMVKLVKG
Sbjct: 61  IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120

Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180
           EAED KI++RNIRR+ NE LKKLVKDKV SEDDERRGQ++IQKLTDKFVAE+DKLV +KE
Sbjct: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180

Query: 181 KEVLTV 186
           KEV+TV
Sbjct: 181 KEVMTV 186


>F1W2N4.1 F1W2N4_9BURK Ribosome recycling factor
          Length = 186

 Score =  318 bits (814), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 150/186 (80%), Positives = 176/186 (94%)

Query: 1   MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60
           MTI DVKK+T+ +M KSIE+L+ DLAKVRTGRAH G+LDH+ VDYYG+PTQL+QVAN+TL
Sbjct: 1   MTIVDVKKNTDVRMHKSIETLKTDLAKVRTGRAHVGMLDHIMVDYYGNPTQLTQVANVTL 60

Query: 61  IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120
           +DART+GVQP++KKM++V+EKAIR+ADLGLNP+TQGDLIRVPTPALTEERRKEMVKLVK 
Sbjct: 61  VDARTLGVQPWEKKMVSVVEKAIRDADLGLNPSTQGDLIRVPTPALTEERRKEMVKLVKS 120

Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180
           EAED KI+IRNIRRDANEGLKKL+KDK CSEDDERR Q++IQK+TDKFVAE+DKLVV+KE
Sbjct: 121 EAEDAKIAIRNIRRDANEGLKKLIKDKECSEDDERRAQDEIQKMTDKFVAEIDKLVVDKE 180

Query: 181 KEVLTV 186
           KEVLTV
Sbjct: 181 KEVLTV 186


>C3X7R5.1 C3X7R5_OXAFO Ribosome-recycling factor
          Length = 186

 Score =  310 bits (795), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 146/186 (78%), Positives = 173/186 (93%)

Query: 1   MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60
           M+IADVKKS EQKM+KSIESL+ADLAKVRTGRAHTGILDHV+VDYYGSPT++SQVAN+TL
Sbjct: 1   MSIADVKKSAEQKMNKSIESLKADLAKVRTGRAHTGILDHVEVDYYGSPTKISQVANITL 60

Query: 61  IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120
           +DARTI VQP++KKM+  IEKAIR++DLGLNP+T G++IRVPTPALTEERRKEMVKLVK 
Sbjct: 61  LDARTISVQPWEKKMVNAIEKAIRDSDLGLNPSTMGEIIRVPTPALTEERRKEMVKLVKT 120

Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180
           E ED K+++RNIRRDANE +KK+VKDK CSEDDERR Q+DIQKLTDKFV ++DKL+ +KE
Sbjct: 121 EGEDAKVAVRNIRRDANEAVKKMVKDKECSEDDERRSQDDIQKLTDKFVQQIDKLLADKE 180

Query: 181 KEVLTV 186
           KEV+TV
Sbjct: 181 KEVMTV 186