BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0007.p (413 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4G5R0.2 A4G5R0_HERAR ATP-dependent RNA helicase EC=3.6.1.- 583 e-164 A6SZD7.1 A6SZD7_JANMA ATP-dependent RNA helicase 577 e-162 F1VXW3.1 F1VXW3_9BURK ATP-dependent RNA helicase DbpA 566 e-159 B9Z3P9.1 B9Z3P9_9NEIS DEAD/DEAH box helicase domain protein 504 e-141 D4XCA9.1 D4XCA9_9BURK ATP-independent RNA helicase DbpA EC=3.6.1.- 496 e-138 >A4G5R0.2 A4G5R0_HERAR ATP-dependent RNA helicase EC=3.6.1.- Length = 464 Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust. Identities = 281/336 (83%), Positives = 305/336 (90%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 M SSF++L L+P ML+NL+ LGY EMT+IQA SLP L+ RDLIAQAKTGSGKTAAFGI Sbjct: 1 MNPSSFAALALSPPMLSNLDALGYREMTSIQAQSLPVILQLRDLIAQAKTGSGKTAAFGI 60 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 GML KLNP++FAIQGLVICPTRELADQVSNELRRLARF DNIKILTLCGG MRPQIASL Sbjct: 61 GMLQKLNPTWFAIQGLVICPTRELADQVSNELRRLARFADNIKILTLCGGAPMRPQIASL 120 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG HIVVGTPGR+RDHI R TINL+TVQTLVLDEADRMVDMGFYE+I GIVSACP RRQ Sbjct: 121 EHGAHIVVGTPGRLRDHISRNTINLSTVQTLVLDEADRMVDMGFYEEIAGIVSACPERRQ 180 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPDDIRKASA FLRDP E+KVEA+HD +IEQRF+EV + RN AVA LL+HY Sbjct: 181 TLLFSATYPDDIRKASAEFLRDPVEVKVEAQHDDSQIEQRFYEVGYDDRNAAVATLLKHY 240 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVSTLAFCNTKIHCRELA ELRAQGFSALALYG+LEQRERDEILV F+NQSCSVLVATD Sbjct: 241 RPVSTLAFCNTKIHCRELAAELRAQGFSALALYGELEQRERDEILVLFANQSCSVLVATD 300 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI +LGAVINVDV++DTEVHIHRIGRTGRG Sbjct: 301 VAARGLDIQSLGAVINVDVSKDTEVHIHRIGRTGRG 336 >A6SZD7.1 A6SZD7_JANMA ATP-dependent RNA helicase Length = 478 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 279/336 (83%), Positives = 304/336 (90%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 MT++SFSSL L+PAML+NL+ LGY EMT IQA SLP LE RDLIAQAKTGSGKTAAFGI Sbjct: 16 MTATSFSSLALSPAMLSNLDSLGYREMTPIQAQSLPVILELRDLIAQAKTGSGKTAAFGI 75 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 G+L KLNP++FA+Q LVICPTRELADQVSNELRRLAR T+NIK+LTLCGG MRPQIASL Sbjct: 76 GLLQKLNPTWFAVQALVICPTRELADQVSNELRRLARATENIKVLTLCGGAPMRPQIASL 135 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG HIVVGTPGRIRDHI R TINL+ VQTLVLDEADRMVDMGFYE+I GIVSACP RRQ Sbjct: 136 EHGAHIVVGTPGRIRDHISRETINLSKVQTLVLDEADRMVDMGFYEEIAGIVSACPTRRQ 195 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPDDIR+ASA FLRDP EIKVEA+HD +IEQRF+ V + RN AVA LL+HY Sbjct: 196 TLLFSATYPDDIRRASAEFLRDPVEIKVEAQHDDSQIEQRFYAVDYDDRNAAVATLLKHY 255 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVSTLAFCNTKIHCRELA ELRAQGFSALALYG+LEQRERDEILV F+NQSCSVLVATD Sbjct: 256 RPVSTLAFCNTKIHCRELAAELRAQGFSALALYGELEQRERDEILVLFANQSCSVLVATD 315 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI +LGAVINVDV++DTEVHIHRIGRTGRG Sbjct: 316 VAARGLDIQSLGAVINVDVSKDTEVHIHRIGRTGRG 351 >F1VXW3.1 F1VXW3_9BURK ATP-dependent RNA helicase DbpA Length = 461 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 270/335 (80%), Positives = 301/335 (89%) Query: 2 TSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGIG 61 T +SFS+L L+P+MLANL+ LGYHEMT IQA SLP L+ RDLIAQAKTGSGKTAAFGIG Sbjct: 4 TPNSFSTLALSPSMLANLDSLGYHEMTPIQAKSLPVILDRRDLIAQAKTGSGKTAAFGIG 63 Query: 62 MLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASLE 121 +L +LNP++FAIQ LVICPTRELADQVSNELRRLARF DN KILTLCGG MRPQIASLE Sbjct: 64 ILQRLNPTWFAIQALVICPTRELADQVSNELRRLARFADNTKILTLCGGAPMRPQIASLE 123 Query: 122 HGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQT 181 HG HI+VGTPGR+RDHIGRG+I+L+TVQTLVLDEADRMVDMGFYE+I GIVSACP RRQT Sbjct: 124 HGAHIIVGTPGRLRDHIGRGSIDLSTVQTLVLDEADRMVDMGFYEEISGIVSACPTRRQT 183 Query: 182 LLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHYQ 241 LLFSATYPDDIRK+SA FLRDP EI VEA+HD ++IEQRF+EV + RN AV RLL +Y+ Sbjct: 184 LLFSATYPDDIRKSSAPFLRDPTEITVEAQHDDNRIEQRFYEVGYDDRNDAVGRLLNNYK 243 Query: 242 PVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATDV 301 P S LAFCNTKIHCRELADELRAQGFSA+ALYG+LEQRERDEILV F+N SCSVLVATDV Sbjct: 244 PASALAFCNTKIHCRELADELRAQGFSAMALYGELEQRERDEILVLFANGSCSVLVATDV 303 Query: 302 AARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 AARGLDI +L VINVDV++DTEVHIHR+GRTGRG Sbjct: 304 AARGLDIQSLEMVINVDVSKDTEVHIHRVGRTGRG 338 >B9Z3P9.1 B9Z3P9_9NEIS DEAD/DEAH box helicase domain protein Length = 460 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 238/336 (70%), Positives = 284/336 (84%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 M + FSSLPL+P+++ NL LGY MT IQA SLP L +DLIAQAKTGSGKTAAFG+ Sbjct: 1 MNKTDFSSLPLSPSLVDNLASLGYTRMTPIQAQSLPVILNRQDLIAQAKTGSGKTAAFGL 60 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 G+L K+NP +FA+Q LV+CPTRELADQV+ E+RRLAR DNIK++TLCGGT M PQI SL Sbjct: 61 GLLDKINPRWFAVQALVLCPTRELADQVAKEIRRLARSVDNIKVVTLCGGTPMGPQIGSL 120 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG H+VVGTPGR+ DH+ R T++L+TV+TLVLDEADRMVDMGFYE+I GIV+ACP +RQ Sbjct: 121 EHGAHVVVGTPGRLHDHLSRNTLDLSTVETLVLDEADRMVDMGFYEEIVGIVAACPRKRQ 180 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPD IRK SARFL++P E+KVE+ HD IEQ F+++ E+R VA LL H+ Sbjct: 181 TLLFSATYPDTIRKQSARFLKNPVEVKVESLHDAGHIEQHFYKIQPERRVATVAALLGHF 240 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVST+AFCNTK RELA+EL+ QGFSALALYG+LEQRERDEILVQF+N+SCSVLVATD Sbjct: 241 RPVSTIAFCNTKQQVRELANELQQQGFSALALYGELEQRERDEILVQFANRSCSVLVATD 300 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI+ L AVINVD++ D E+HIHRIGRTGRG Sbjct: 301 VAARGLDISTLEAVINVDLSHDPEIHIHRIGRTGRG 336 >D4XCA9.1 D4XCA9_9BURK ATP-independent RNA helicase DbpA EC=3.6.1.- Length = 462 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 237/336 (70%), Positives = 282/336 (83%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 MT++ FS+LPL PA+L NL+ LG+ +MT IQA SLP LEGRD+IAQAKTGSGKTAAFG+ Sbjct: 1 MTNTPFSTLPLLPALLDNLQSLGFEQMTPIQAQSLPLILEGRDIIAQAKTGSGKTAAFGL 60 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 G+L KL+P+ A Q L++CPTRELADQV+ ELRRLAR N+KILTLCGG RPQ SL Sbjct: 61 GVLQKLDPARLAPQALLVCPTRELADQVAQELRRLARLIPNVKILTLCGGAPARPQAESL 120 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 G H+VVGTPGRI+DH+ RG+++L+ + TLVLDEADRMVDMGFY+DI I S CPA+RQ Sbjct: 121 ARGAHLVVGTPGRIQDHLERGSLDLSGLTTLVLDEADRMVDMGFYDDIVAIASHCPAKRQ 180 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPD+IRK SARFLR+P E+KVEA+HD +IEQ F+E+ + R AVARLL H+ Sbjct: 181 TLLFSATYPDNIRKLSARFLRNPAEVKVEAQHDASRIEQIFYEIDEKDRLDAVARLLAHF 240 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVSTLAFCNTKI +L + L+A G SA AL GDLEQRERDEIL+QF+NQSC+VLVATD Sbjct: 241 RPVSTLAFCNTKIRSHDLVERLQADGISAQALNGDLEQRERDEILIQFANQSCAVLVATD 300 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI NLGAVINVDVT+DTEVH+HRIGR+GRG Sbjct: 301 VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRSGRG 336