BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0004.p         (111 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITT4.1 D8ITT4_HERSS Putative uncharacterized protein                 95   3e-18

>D8ITT4.1 D8ITT4_HERSS Putative uncharacterized protein
          Length = 106

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 10/103 (9%)

Query: 1   MKTRQLIIAAAMLAVTGGAMAQQANTTEASSPGMTVPASTA-NGV-SNDPYVQKRQSDAD 58
           MK R ++I++  +A+ GGAMAQ      +S+P    P+STA NG  SNDP+VQKRQ+DAD
Sbjct: 1   MKARHILISSLFMALAGGAMAQ------SSAP--VAPSSTATNGAPSNDPFVQKRQADAD 52

Query: 59  AKAEYKMQKKAVKQQAKADKKAAKADLKAQKKESTAERNAQLA 101
           AKA+YK +KKA KQ+ K D+  AKA LK +++ESTA+RN  LA
Sbjct: 53  AKAQYKAEKKAAKQEYKQDRAQAKAQLKQERQESTAQRNEALA 95