BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0014.0004.p (409 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUY1.1 D8IUY1_HERSS ABC-type branched-chain amino acid transpo... 408 e-112 B0RKH1.1 B0RKH1_HERSE Periplasmic component protein 408 e-112 B9Z059.1 B9Z059_9NEIS Extracellular ligand-binding receptor 336 4e-90 Q21UN1.1 Q21UN1_RHOFD Extracellular ligand-binding receptor 303 2e-80 A1WGR4.1 A1WGR4_VEREI Extracellular ligand-binding receptor 302 8e-80 >D8IUY1.1 D8IUY1_HERSS ABC-type branched-chain amino acid transport system, periplasmic component protein Length = 378 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 189/376 (50%), Positives = 265/376 (70%) Query: 34 ERMPPVRVIAIALSLLSACAFAQERQVVRFGFSSPLSGPQAAAGKDALNGVQMAIERLNQ 93 +R+ + +IA +L+L+ A A AQE QVV+ GFSSPL+GPQA+AGKD G+ MAIERLN Sbjct: 3 KRVSGLNIIAASLALIPAFAMAQETQVVKIGFSSPLTGPQASAGKDNQGGLMMAIERLNA 62 Query: 94 QDLQLDGKAIRFELLARDDKASPQEGAAVARELVAAGVRAVLGPFNSGVALSVTRIYNDA 153 Q + + GK I+F+++A DD+A P+ G AVA++L GV+A++GP+NSGV + +R+YNDA Sbjct: 63 QPITVGGKKIKFDVIAEDDQADPKSGVAVAQKLADQGVKAIVGPYNSGVTIPASRVYNDA 122 Query: 154 GVVSLTVASNPKVTQSALTQVFRIAASDADMGGKMGLYAARHLKLKKMAVLDDGSLYARG 213 G+V TVASNPK+TQ +FR+AASD+ +GGKM LYAA+ LK K++AV+DD + Y +G Sbjct: 123 GIVVATVASNPKITQQGFATLFRVAASDSQLGGKMALYAAKELKFKRVAVIDDRTAYGQG 182 Query: 214 LIDKFERVAKMNGVQLVYKEAVGDKAEEFGTALNAIAAAKADAIFFGGYVSQAGALLRQM 273 L +F +VAK NG+ +V + DKA +F L +I K DA+F GGY Q G + RQM Sbjct: 183 LAQEFIKVAKANGIDVVSTDFTNDKATDFTAILTSIKGKKPDAVFLGGYAPQGGPIKRQM 242 Query: 274 QQRGMAIPLLGGDALCSSTMLVQAGSALGDRTYCVQGGVWLTRVSDGAVFASAYQGKYGS 333 +Q G+ +PL+GGD +CS M G A+G+ YC QGG L + +G VF+ YQ KY Sbjct: 243 KQLGVDVPLMGGDGICSPEMGRLGGDAIGESVYCTQGGTMLDKAKEGKVFSDEYQKKYNR 302 Query: 334 MPDVYAPTFYDGVLLLWQAMKSANSPDPRVFAPVLARMRYKGVTATYEFNSRHDMTEATV 393 + YA +FYDG++L+ QAMK ANS DP+ F P LA++ YKGV Y+F++ HD+ ++ V Sbjct: 303 PAETYAVSFYDGMMLIAQAMKQANSVDPKQFGPALAKISYKGVAGQYDFDANHDLKQSPV 362 Query: 394 TILRFKDGRLVPLSSF 409 T+ RFKDG VPL+S+ Sbjct: 363 TVYRFKDGLPVPLTSY 378 >B0RKH1.1 B0RKH1_HERSE Periplasmic component protein Length = 378 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 189/376 (50%), Positives = 265/376 (70%) Query: 34 ERMPPVRVIAIALSLLSACAFAQERQVVRFGFSSPLSGPQAAAGKDALNGVQMAIERLNQ 93 +R+ + +IA +L+L+ A A AQE QVV+ GFSSPL+GPQA+AGKD G+ MAIERLN Sbjct: 3 KRVSGLNIIAASLALIPAFAMAQETQVVKIGFSSPLTGPQASAGKDNQGGLMMAIERLNA 62 Query: 94 QDLQLDGKAIRFELLARDDKASPQEGAAVARELVAAGVRAVLGPFNSGVALSVTRIYNDA 153 Q + + GK I+F+++A DD+A P+ G AVA++L GV+A++GP+NSGV + +R+YNDA Sbjct: 63 QPITVGGKKIKFDVIAEDDQADPKSGVAVAQKLADQGVKAIVGPYNSGVTIPASRVYNDA 122 Query: 154 GVVSLTVASNPKVTQSALTQVFRIAASDADMGGKMGLYAARHLKLKKMAVLDDGSLYARG 213 G+V TVASNPK+TQ +FR+AASD+ +GGKM LYAA+ LK K++AV+DD + Y +G Sbjct: 123 GIVVATVASNPKITQQGFATLFRVAASDSQLGGKMALYAAKELKFKRVAVIDDRTAYGQG 182 Query: 214 LIDKFERVAKMNGVQLVYKEAVGDKAEEFGTALNAIAAAKADAIFFGGYVSQAGALLRQM 273 L +F +VAK NG+ +V + DKA +F L +I K DA+F GGY Q G + RQM Sbjct: 183 LAQEFIKVAKANGIDVVSTDFTNDKATDFTAILTSIKGKKPDAVFLGGYAPQGGPIKRQM 242 Query: 274 QQRGMAIPLLGGDALCSSTMLVQAGSALGDRTYCVQGGVWLTRVSDGAVFASAYQGKYGS 333 +Q G+ +PL+GGD +CS M G A+G+ YC QGG L + +G VF+ YQ KY Sbjct: 243 KQLGVDVPLMGGDGICSPEMGRLGGDAIGESVYCTQGGTMLDKAKEGKVFSDEYQKKYNR 302 Query: 334 MPDVYAPTFYDGVLLLWQAMKSANSPDPRVFAPVLARMRYKGVTATYEFNSRHDMTEATV 393 + YA +FYDG++L+ QAMK ANS DP+ F P LA++ YKGV Y+F++ HD+ ++ V Sbjct: 303 PAETYAVSFYDGMMLIAQAMKQANSVDPKQFGPALAKISYKGVAGQYDFDANHDLKQSPV 362 Query: 394 TILRFKDGRLVPLSSF 409 T+ RFKDG VPL+S+ Sbjct: 363 TVYRFKDGLPVPLTSY 378 >B9Z059.1 B9Z059_9NEIS Extracellular ligand-binding receptor Length = 381 Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 160/368 (43%), Positives = 240/368 (65%) Query: 41 VIAIALSLLSACAFAQERQVVRFGFSSPLSGPQAAAGKDALNGVQMAIERLNQQDLQLDG 100 V A L+L FA E V+ G + PL+GPQAA GKD NG++MA++RLN Q + + G Sbjct: 12 VFAAGLALTPLLGFAAEEMTVKIGLTGPLTGPQAAIGKDHENGLRMAMDRLNAQGIVVGG 71 Query: 101 KAIRFELLARDDKASPQEGAAVARELVAAGVRAVLGPFNSGVALSVTRIYNDAGVVSLTV 160 K +RFE+++ DD A P+ G VA+ V A V+AV+GP+NSGVA+ ++++ NDAG+V TV Sbjct: 72 KKVRFEMMSEDDGADPRTGMTVAQRFVDANVKAVIGPYNSGVAIPISKLLNDAGIVMATV 131 Query: 161 ASNPKVTQSALTQVFRIAASDADMGGKMGLYAARHLKLKKMAVLDDGSLYARGLIDKFER 220 ASNPKVTQ+ VFRI ASD +G KMG++AA++LK K A++DD + Y +G+ D+F + Sbjct: 132 ASNPKVTQNGYPYVFRIGASDTQLGTKMGVFAAKNLKAKSFAIIDDRTAYGQGVADEFIK 191 Query: 221 VAKMNGVQLVYKEAVGDKAEEFGTALNAIAAAKADAIFFGGYVSQAGALLRQMQQRGMAI 280 AK NG+Q+V +E DK+ +F L +I AAK D IF+GGY SQ G + RQM + G+ Sbjct: 192 AAKANGIQIVAREFTTDKSTDFSAILTSIKAAKPDGIFYGGYYSQGGPMRRQMARLGLKA 251 Query: 281 PLLGGDALCSSTMLVQAGSALGDRTYCVQGGVWLTRVSDGAVFASAYQGKYGSMPDVYAP 340 LLGGD +C+ + G+ + YC QGG L + S+G F + Y+ ++ P VY Sbjct: 252 YLLGGDGICNEELAKLGGTTVDGGVYCPQGGPVLEQTSEGKQFTTEYKKRFSIEPLVYGA 311 Query: 341 TFYDGVLLLWQAMKSANSPDPRVFAPVLARMRYKGVTATYEFNSRHDMTEATVTILRFKD 400 + YDG+ ++ +AM+ ANS +P+ + LA +GV TY+F+ + D+ + +T+ FK+ Sbjct: 312 SMYDGLNIIAKAMQKANSVEPKQYRAALAASNQQGVAGTYQFDDKRDLKNSPITVYSFKN 371 Query: 401 GRLVPLSS 408 G+ VP++ Sbjct: 372 GQPVPVAE 379 >Q21UN1.1 Q21UN1_RHOFD Extracellular ligand-binding receptor Length = 377 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 154/374 (41%), Positives = 234/374 (62%), Gaps = 4/374 (1%) Query: 36 MPPVRVIAIALSLLSACAFAQERQVVRFGFSSPLSGPQAAAGKDALNGVQMAIERLNQQD 95 +P +A+A + + A+AQE++VV G + PLSG A AGKD NGV++AIE LN + Sbjct: 8 LPLFGALAVAFA---SHAYAQEQKVV-IGLTGPLSGANAFAGKDNENGVRLAIEDLNSKK 63 Query: 96 LQLDGKAIRFELLARDDKASPQEGAAVARELVAAGVRAVLGPFNSGVALSVTRIYNDAGV 155 + + GK ++FEL + DD+ P+ G VA++LV +GV+ V+GP+ SGVA+ +R+Y+ G Sbjct: 64 ITVGGKMLKFELQSEDDQCDPRAGVMVAQKLVDSGVKFVMGPYCSGVAVPASRLYSQGGA 123 Query: 156 VSLTVASNPKVTQSALTQVFRIAASDADMGGKMGLYAARHLKLKKMAVLDDGSLYARGLI 215 + TV +NPKVTQ +FRI ASD +G M YAA+ LK+K +AV+DD + + +G+ Sbjct: 124 MLSTVGTNPKVTQGGYKNLFRIIASDNQIGASMAAYAAKVLKVKSVAVIDDRTAFGQGVA 183 Query: 216 DKFERVAKMNGVQLVYKEAVGDKAEEFGTALNAIAAAKADAIFFGGYVSQAGALLRQMQQ 275 ++F + AK G+ +V +E DKA +F L + A K +AIFFGGY QAG L RQ+QQ Sbjct: 184 EEFTKEAKNLGLSVVGQEFTTDKATDFTAILTTLKAKKPEAIFFGGYAPQAGPLARQLQQ 243 Query: 276 RGMAIPLLGGDALCSSTMLVQAGSALGDRTYCVQGGVWLTRVSDGAVFASAYQGKYGSMP 335 + LLGGD LCS M G A+ D +C QGG L + ++G F + ++ ++G P Sbjct: 244 LAIKTKLLGGDTLCSPEMGKLGGEAVNDVVFCAQGGSILDKAANGPTFKAKFKKRFGLDP 303 Query: 336 DVYAPTFYDGVLLLWQAMKSANSPDPRVFAPVLARMRYKGVTATYEFNSRHDMTEATVTI 395 DVYA FYD + + ++M+ ANS DP + + YKG+ Y ++ + +M +A +T+ Sbjct: 304 DVYAAPFYDQTMFIGESMQKANSIDPNKVGAEIYKSTYKGIAGNYAYDDKGNMKQAPITV 363 Query: 396 LRFKDGRLVPLSSF 409 FK+ VPL+S+ Sbjct: 364 YTFKNALPVPLASY 377 >A1WGR4.1 A1WGR4_VEREI Extracellular ligand-binding receptor Length = 378 Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 148/364 (40%), Positives = 235/364 (64%), Gaps = 1/364 (0%) Query: 46 LSLLSACAFAQERQVVRFGFSSPLSGPQAAAGKDALNGVQMAIERLNQQDLQLDGKAIRF 105 L+LLSA A AQE++V G + PLSGP A AGKD +GV++AIE LN + + + GK ++F Sbjct: 16 LTLLSATALAQEQRVA-IGHTGPLSGPNAFAGKDNESGVRLAIEELNVKKIMVGGKVLKF 74 Query: 106 ELLARDDKASPQEGAAVARELVAAGVRAVLGPFNSGVALSVTRIYNDAGVVSLTVASNPK 165 +L++ DD+ + G +VA++L+ +G++ V+GP+ SGVA+ +R+Y++ G + TVA+NPK Sbjct: 75 DLVSEDDQCDARTGVSVAQKLIDSGIQYVMGPYCSGVAIPASRVYSEGGAMLSTVATNPK 134 Query: 166 VTQSALTQVFRIAASDADMGGKMGLYAARHLKLKKMAVLDDGSLYARGLIDKFERVAKMN 225 VT+S +FRI A D +G M YAA+ LK+ ++AV+DD + Y +G+ ++F + AK Sbjct: 135 VTESGYKNLFRITAGDTQIGSNMAAYAAKVLKVTQVAVIDDRTAYGQGVAEQFAKDAKKQ 194 Query: 226 GVQLVYKEAVGDKAEEFGTALNAIAAAKADAIFFGGYVSQAGALLRQMQQRGMAIPLLGG 285 G+ LV +E DK+ +F + L ++ A + AIFFGGY QA + RQM+Q G+ LLGG Sbjct: 195 GLTLVGQEFTTDKSTDFLSILTSLKARQPQAIFFGGYAPQAAPMARQMKQLGLPAKLLGG 254 Query: 286 DALCSSTMLVQAGSALGDRTYCVQGGVWLTRVSDGAVFASAYQGKYGSMPDVYAPTFYDG 345 D LCS + G A+ D C QGG LT+V+DG F + Y+ ++ PDVYA +FYD Sbjct: 255 DTLCSVEVGKLGGDAVNDTVICAQGGSMLTKVADGPAFMAKYKARFNRDPDVYAASFYDQ 314 Query: 346 VLLLWQAMKSANSPDPRVFAPVLARMRYKGVTATYEFNSRHDMTEATVTILRFKDGRLVP 405 ++ + ++M+ S P + + Y+GV TY ++ + ++ +A +T+ F++G VP Sbjct: 315 MMFIAESMQKTQSVQPDKVGAQMYQSSYQGVATTYSYDDKGNLKQAPITVQIFRNGLPVP 374 Query: 406 LSSF 409 L S+ Sbjct: 375 LGSY 378