BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0248.p (238 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IVL3.1 D8IVL3_HERSS Thiol:disulfide interchange protein DsbA 359 2e-97 B0RKH2.1 B0RKH2_HERSE Thiol:disulfide interchange protein DsbA 359 2e-97 A6SU58.1 A6SU58_JANMA Thiol:disulfide interchange protein DsbA 323 1e-86 A4G1E4.1 A4G1E4_HERAR Thiol:disulfide interchange protein DsbA 317 7e-85 F1VUI8.1 F1VUI8_9BURK Periplasmic thiol:disulfide interchange pr... 301 4e-80 >D8IVL3.1 D8IVL3_HERSS Thiol:disulfide interchange protein DsbA Length = 229 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 162/218 (74%), Positives = 191/218 (87%), Gaps = 4/218 (1%) Query: 1 MRLFRHALAVISLGLLA----VSASASPANPQSGTDYRTLEQAQPTESGKKIEVTEFFWY 56 MR + LA +S G+LA V ASASPANPQ+GTDYR LEQAQPT+SG K+EVTEFFW+ Sbjct: 1 MRFHQKLLAAVSFGVLAFTASVGASASPANPQAGTDYRVLEQAQPTDSGNKVEVTEFFWF 60 Query: 57 SCPHCAAFDPALTAWVKKQGDKIVFKQVPVAFRESFIPQQKLYYALEAMGKTAEMNPKIF 116 CPHCAA+DP+LTAWVKKQGDKI FK+VPVAFR+SF+PQQKLYY LEAMG+ E+ PKIF Sbjct: 61 DCPHCAAWDPSLTAWVKKQGDKISFKKVPVAFRDSFVPQQKLYYTLEAMGRADELTPKIF 120 Query: 117 QAIHVDRQRVDTDKTILEFIEKQGIDKQKFVDLYNSFGVQTKVRRASQLQEAYKIDGVPT 176 AIHV+ QR++TDKTIL +IEK GIDKQKF+DLYNSFG+QTK RRA+QLQEAYK+DGVP Sbjct: 121 HAIHVENQRINTDKTILAYIEKAGIDKQKFLDLYNSFGIQTKARRAAQLQEAYKVDGVPM 180 Query: 177 IAIDGRYLTSPSIAGASMANQPESMQQAASLQVMDHLL 214 IAIDGRY+TSP++ G ++ANQPESMQQAA+LQVMDHL+ Sbjct: 181 IAIDGRYVTSPAVVGVALANQPESMQQAAALQVMDHLV 218 >B0RKH2.1 B0RKH2_HERSE Thiol:disulfide interchange protein DsbA Length = 229 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 162/218 (74%), Positives = 191/218 (87%), Gaps = 4/218 (1%) Query: 1 MRLFRHALAVISLGLLA----VSASASPANPQSGTDYRTLEQAQPTESGKKIEVTEFFWY 56 MR + LA +S G+LA V ASASPANPQ+GTDYR LEQAQPT+SG K+EVTEFFW+ Sbjct: 1 MRFHQKLLAAVSFGVLAFTASVGASASPANPQAGTDYRVLEQAQPTDSGNKVEVTEFFWF 60 Query: 57 SCPHCAAFDPALTAWVKKQGDKIVFKQVPVAFRESFIPQQKLYYALEAMGKTAEMNPKIF 116 CPHCAA+DP+LTAWVKKQGDKI FK+VPVAFR+SF+PQQKLYY LEAMG+ E+ PKIF Sbjct: 61 DCPHCAAWDPSLTAWVKKQGDKISFKKVPVAFRDSFVPQQKLYYTLEAMGRADELTPKIF 120 Query: 117 QAIHVDRQRVDTDKTILEFIEKQGIDKQKFVDLYNSFGVQTKVRRASQLQEAYKIDGVPT 176 AIHV+ QR++TDKTIL +IEK GIDKQKF+DLYNSFG+QTK RRA+QLQEAYK+DGVP Sbjct: 121 HAIHVENQRINTDKTILAYIEKAGIDKQKFLDLYNSFGIQTKARRAAQLQEAYKVDGVPM 180 Query: 177 IAIDGRYLTSPSIAGASMANQPESMQQAASLQVMDHLL 214 IAIDGRY+TSP++ G ++ANQPESMQQAA+LQVMDHL+ Sbjct: 181 IAIDGRYVTSPAVVGVALANQPESMQQAAALQVMDHLV 218 >A6SU58.1 A6SU58_JANMA Thiol:disulfide interchange protein DsbA Length = 219 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 147/218 (67%), Positives = 182/218 (83%) Query: 1 MRLFRHALAVISLGLLAVSASASPANPQSGTDYRTLEQAQPTESGKKIEVTEFFWYSCPH 60 MR +H LAV SL L A +A ASP P +GTDYRTLE+AQ +SGKK+EVTEFFWYSCPH Sbjct: 1 MRFIQHLLAVASLSLFAATAGASPTAPVNGTDYRTLEKAQQVDSGKKVEVTEFFWYSCPH 60 Query: 61 CAAFDPALTAWVKKQGDKIVFKQVPVAFRESFIPQQKLYYALEAMGKTAEMNPKIFQAIH 120 C+A +P+L AWVKKQGDKI FK+VPVAFR+SFIPQQKLYY+LEA+G ++ K+F+AIH Sbjct: 61 CSALEPSLEAWVKKQGDKINFKRVPVAFRDSFIPQQKLYYSLEALGLVNSLHGKVFRAIH 120 Query: 121 VDRQRVDTDKTILEFIEKQGIDKQKFVDLYNSFGVQTKVRRASQLQEAYKIDGVPTIAID 180 VDRQ +DTDK I +FI KQG+D +KF ++YNSFG+Q+KV+RA+QLQ AYK+DGVP IAID Sbjct: 121 VDRQPLDTDKQIADFIAKQGVDAKKFAEVYNSFGIQSKVQRATQLQGAYKVDGVPMIAID 180 Query: 181 GRYLTSPSIAGASMANQPESMQQAASLQVMDHLLTKLA 218 GRY+TSPSI GAS+ N+PE++ A+LQVMD L+TK A Sbjct: 181 GRYITSPSIVGASLGNRPEAILHEATLQVMDWLVTKSA 218 >A4G1E4.1 A4G1E4_HERAR Thiol:disulfide interchange protein DsbA Length = 219 Score = 317 bits (813), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 148/218 (67%), Positives = 183/218 (83%) Query: 1 MRLFRHALAVISLGLLAVSASASPANPQSGTDYRTLEQAQPTESGKKIEVTEFFWYSCPH 60 MR +H LAV +LGL+A +A ASPA P +GTDYRTLE+AQ T+SGKK+EVTEFFWYSCPH Sbjct: 1 MRFIQHLLAVATLGLMAATAGASPAAPINGTDYRTLEKAQQTDSGKKVEVTEFFWYSCPH 60 Query: 61 CAAFDPALTAWVKKQGDKIVFKQVPVAFRESFIPQQKLYYALEAMGKTAEMNPKIFQAIH 120 C A +P L AWVKK DKIVFK+VPVAFR SFIPQQKLYY +EA+G ++ ++F+AIH Sbjct: 61 CEALEPTLQAWVKKNADKIVFKRVPVAFRASFIPQQKLYYTIEALGMVDTLHARVFRAIH 120 Query: 121 VDRQRVDTDKTILEFIEKQGIDKQKFVDLYNSFGVQTKVRRASQLQEAYKIDGVPTIAID 180 ++RQ++DTDK IL+FI KQG+D +KF D YNSFGVQTKV+RA+QLQEAYK+DGVP IAID Sbjct: 121 IERQQLDTDKQILDFIAKQGVDAKKFADTYNSFGVQTKVQRAAQLQEAYKVDGVPMIAID 180 Query: 181 GRYLTSPSIAGASMANQPESMQQAASLQVMDHLLTKLA 218 GRY+TSPSI GA++ N+PE++ A+LQVMDHL+ K A Sbjct: 181 GRYVTSPSIVGAALGNRPEAVLHDATLQVMDHLVAKAA 218 >F1VUI8.1 F1VUI8_9BURK Periplasmic thiol:disulfide interchange protein DsbA Length = 231 Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 155/231 (67%), Positives = 182/231 (78%), Gaps = 6/231 (2%) Query: 1 MRLFR---HALAVISLGL--LAVSASASPANPQSGTDYRTLEQAQPTESGKKIEVTEFFW 55 MRL R LA + LGL SA ASPA PQSG +YRTLE+AQPT+SG KIEVTEFFW Sbjct: 1 MRLTRFIPRLLATLGLGLSFTMASAIASPAAPQSGAEYRTLERAQPTDSGNKIEVTEFFW 60 Query: 56 YSCPHCAAFDPALTAWVKKQGDKIVFKQVPVAFRESFIPQQKLYYALEAMGKTAEMNPKI 115 YSCPHC F+P L WVKKQGDKI FK+VP+ FRESFIPQQKLYYALEAMGK+ +M KI Sbjct: 61 YSCPHCFVFEPTLAEWVKKQGDKIEFKRVPINFRESFIPQQKLYYALEAMGKSEDMQRKI 120 Query: 116 FQAIHVDRQRVDTDKTILEFIEKQGIDKQKFVDLYNSFGVQTKVRRASQLQEAYKIDGVP 175 F AIHV+RQ +DTD +IL+F+ KQGIDKQKF YNSFG+Q+KV+RA LQEAYKIDGVP Sbjct: 121 FNAIHVERQAIDTDASILDFVGKQGIDKQKFTATYNSFGMQSKVKRALVLQEAYKIDGVP 180 Query: 176 TIAIDGRYLTSPSIAGASMAN-QPESMQQAASLQVMDHLLTKLAAEKGAEK 225 TIAIDG+Y+TSPSI G +M QPE + A+++QVMD L+ K AE+ A+K Sbjct: 181 TIAIDGKYITSPSIVGTAMGGRQPEPVLAASTVQVMDALVAKALAERAAKK 231