BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0246.p         (109 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VUI6.1 F1VUI6_9BURK Arginyl-tRNA synthetase                         185   2e-45
D8IVL5.1 D8IVL5_HERSS Arginyl-tRNA synthetase EC=6.1.1.19             175   2e-42
A6SU56.1 SYR_JANMA Arginyl-tRNA synthetase EC=6.1.1.19                173   7e-42
A4G1E2.1 SYR_HERAR Arginyl-tRNA synthetase EC=6.1.1.19                171   5e-41
C3XC91.1 C3XC91_OXAFO Arginyl-tRNA synthetase EC=6.1.1.19             157   7e-37

>F1VUI6.1 F1VUI6_9BURK Arginyl-tRNA synthetase
          Length = 553

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/109 (85%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 1   VLNQWGGGEAALDQVADLSPLTAPREVSLLAKLAEYPEALAHALQELGPHQVAFYLRDLA 60
           VL QWGG E+ LD V DLSPLTAPRE SLLA+LA+YPEAL HAL+ELGPHQVAFYLRDLA
Sbjct: 446 VLAQWGGDESVLDGV-DLSPLTAPREASLLARLADYPEALEHALEELGPHQVAFYLRDLA 504

Query: 61  GELHSYYNAERVLVDDVPTKMARLALMSATRQVLRNGLALIGVSAPTRM 109
           GELHSYYNAERVLVDD+PT+MARLALM ATRQVLRNGL+LIGVSAP RM
Sbjct: 505 GELHSYYNAERVLVDDMPTRMARLALMLATRQVLRNGLSLIGVSAPLRM 553


>D8IVL5.1 D8IVL5_HERSS Arginyl-tRNA synthetase EC=6.1.1.19
          Length = 577

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/109 (82%), Positives = 96/109 (88%)

Query: 1   VLNQWGGGEAALDQVADLSPLTAPREVSLLAKLAEYPEALAHALQELGPHQVAFYLRDLA 60
           VL + G  E AL   ADLS LTAPRE +LLAKLAEYP+ LAHALQELGPHQVAFYLRDLA
Sbjct: 469 VLGKSGVDEEALKSSADLSLLTAPREATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLA 528

Query: 61  GELHSYYNAERVLVDDVPTKMARLALMSATRQVLRNGLALIGVSAPTRM 109
           GELHSYYNAERVLVDDVPT+ ARLAL+SATRQVLRNGLAL+GVSAP RM
Sbjct: 529 GELHSYYNAERVLVDDVPTRSARLALLSATRQVLRNGLALLGVSAPARM 577


>A6SU56.1 SYR_JANMA Arginyl-tRNA synthetase EC=6.1.1.19
          Length = 577

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/110 (82%), Positives = 96/110 (87%), Gaps = 2/110 (1%)

Query: 1   VLNQW-GGGEAALDQVADLSPLTAPREVSLLAKLAEYPEALAHALQELGPHQVAFYLRDL 59
           VL QW  G EA+LD+V DLSPLTA RE +LLAKLAEYPE L  AL+ELGPHQVAFYLRDL
Sbjct: 469 VLAQWTDGDEASLDKV-DLSPLTAARETALLAKLAEYPETLQKALEELGPHQVAFYLRDL 527

Query: 60  AGELHSYYNAERVLVDDVPTKMARLALMSATRQVLRNGLALIGVSAPTRM 109
           AGELHSYYNAERVLVDD   KMAR+ALMSATRQVLRNGLALIGVSAP RM
Sbjct: 528 AGELHSYYNAERVLVDDEALKMARIALMSATRQVLRNGLALIGVSAPARM 577


>A4G1E2.1 SYR_HERAR Arginyl-tRNA synthetase EC=6.1.1.19
          Length = 577

 Score =  171 bits (432), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 92/110 (83%), Positives = 94/110 (85%), Gaps = 2/110 (1%)

Query: 1   VLNQW-GGGEAALDQVADLSPLTAPREVSLLAKLAEYPEALAHALQELGPHQVAFYLRDL 59
           VL QW  G EAAL  V DLSPLTAPRE +LLAKLAEYPEAL  AL+ELGPHQVAFYLRDL
Sbjct: 469 VLAQWTDGDEAALLDV-DLSPLTAPREAALLAKLAEYPEALQRALEELGPHQVAFYLRDL 527

Query: 60  AGELHSYYNAERVLVDDVPTKMARLALMSATRQVLRNGLALIGVSAPTRM 109
           A ELHSYYNAERVLVDDV  KMARL LM ATRQVLRNGLALIGVSAP RM
Sbjct: 528 AAELHSYYNAERVLVDDVALKMARLTLMHATRQVLRNGLALIGVSAPARM 577


>C3XC91.1 C3XC91_OXAFO Arginyl-tRNA synthetase EC=6.1.1.19
          Length = 571

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 76/109 (69%), Positives = 91/109 (83%), Gaps = 1/109 (0%)

Query: 1   VLNQWGGGEAALDQVADLSPLTAPREVSLLAKLAEYPEALAHALQELGPHQVAFYLRDLA 60
           V +QWGG E+ALD V DLSPLT+P E +LL+KL++YP+ L  A +EL PH VAFYLR+LA
Sbjct: 464 VFSQWGGDESALDNV-DLSPLTSPHEYALLSKLSDYPDILTRAQEELSPHLVAFYLRELA 522

Query: 61  GELHSYYNAERVLVDDVPTKMARLALMSATRQVLRNGLALIGVSAPTRM 109
           GELH YYNAER LV+D   K+ARLAL+ ATRQVLRNGLAL+GVSAPT+M
Sbjct: 523 GELHGYYNAERFLVEDETVKLARLALLKATRQVLRNGLALLGVSAPTKM 571