BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0203.p (402 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXM9.1 D8IXM9_HERSS ABC-type branched-chain amino acid transpo... 770 0.0 F1VZ06.1 F1VZ06_9BURK Urea ABC transporter, urea binding protein 747 0.0 D5NHV4.1 D5NHV4_9BURK Urea ABC transporter, urea binding protein 697 0.0 Q13NT4.1 Q13NT4_BURXL Amino acid/amide ABC transporter substrate... 697 0.0 Q87XU7.1 Q87XU7_PSESM Branched-chain amino acid ABC transporter,... 694 0.0 >D8IXM9.1 D8IXM9_HERSS ABC-type branched-chain amino acid transport system, periplasmic component protein Length = 418 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/383 (97%), Positives = 380/383 (99%) Query: 20 AQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGR 79 AQQ+PTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQIN+MGGILGR Sbjct: 36 AQQYPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGR 95 Query: 80 KIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTF 139 KIKIIQEDGASDWPTFAEKAKKLLEND VAAVFGCWTSASRKAVLPVFEKDNGLLYYPTF Sbjct: 96 KIKIIQEDGASDWPTFAEKAKKLLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTF 155 Query: 140 YEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIEN 199 YEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFL+GSDYIWPRTSNKIARKHIEN Sbjct: 156 YEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIEN 215 Query: 200 VLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQ 259 VLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQ Sbjct: 216 VLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQ 275 Query: 260 NLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQ 319 NLLTISVTEDEMLGIGGENVEGF+ASMKYFQSLDN NNKKFVAEFKAKFGANSVIGDVTQ Sbjct: 276 NLLTISVTEDEMLGIGGENVEGFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQ 335 Query: 320 AAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHANHHLWSKTRIGEAQK 379 AAYLGPWLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVKVH NHHLWSKTRIGEAQK Sbjct: 336 AAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQK 395 Query: 380 DGQFKVIYESDLIEPNPFPKGYQ 402 DGQFKV+YES+LIEPNPFPKGYQ Sbjct: 396 DGQFKVVYESELIEPNPFPKGYQ 418 >F1VZ06.1 F1VZ06_9BURK Urea ABC transporter, urea binding protein Length = 417 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/396 (90%), Positives = 379/396 (95%) Query: 7 AAGAAMAFPGLAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 66 A + +AFP + AQ T+K+NTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA Sbjct: 22 AVASTLAFPVMGFAQSPATSKINTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 81 Query: 67 IDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPV 126 IDQIN+MGGILGRKIKIIQEDGASDWPTFAEKAKKLL +D VA VFGCWTSASRKAVLPV Sbjct: 82 IDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLVSDRVATVFGCWTSASRKAVLPV 141 Query: 127 FEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWP 186 FEK+NGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL+W+AKEKKAKTFFL+GSDYIWP Sbjct: 142 FEKENGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLDWIAKEKKAKTFFLVGSDYIWP 201 Query: 187 RTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFY 246 RTSNKIARKHIENV+KGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIF DVVGGSNVAFY Sbjct: 202 RTSNKIARKHIENVIKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFTDVVGGSNVAFY 261 Query: 247 KQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKA 306 KQLKAAGVTAKTQ LLTISVTEDEMLGIGGENVEGFYASMKYFQSL+NPNNKKFVA+FKA Sbjct: 262 KQLKAAGVTAKTQTLLTISVTEDEMLGIGGENVEGFYASMKYFQSLENPNNKKFVADFKA 321 Query: 307 KFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHANH 366 K+GAN+V+GDVTQAAYLGPWLWKAAVEKAGSFDVDKV+AAS GLELK APEGYVKVH NH Sbjct: 322 KYGANAVMGDVTQAAYLGPWLWKAAVEKAGSFDVDKVIAASAGLELKNAPEGYVKVHENH 381 Query: 367 HLWSKTRIGEAQKDGQFKVIYESDLIEPNPFPKGYQ 402 HLWSKTRIG+AQKDGQFKV+YES+LIEPNPFPKGYQ Sbjct: 382 HLWSKTRIGQAQKDGQFKVVYESELIEPNPFPKGYQ 417 >D5NHV4.1 D5NHV4_9BURK Urea ABC transporter, urea binding protein Length = 421 Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/398 (85%), Positives = 363/398 (91%), Gaps = 2/398 (0%) Query: 7 AAGAAMAFPGLAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 66 AA A+A G+A AQQFPTAKVNTT LA+TDTEVTVGQLHSATGTMAISETGSIQAERLA Sbjct: 24 AAAPALAMSGIARAQQFPTAKVNTTHLAVTDTEVTVGQLHSATGTMAISETGSIQAERLA 83 Query: 67 IDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPV 126 I+QINS GGILGRKIKIIQEDGASDWPTFAEK+KKLLENDHVAAVFGCWTSASRKAVLP+ Sbjct: 84 IEQINSAGGILGRKIKIIQEDGASDWPTFAEKSKKLLENDHVAAVFGCWTSASRKAVLPI 143 Query: 127 FEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWP 186 FE+DNGLLYYPTFYEGLEQS NVFYTGQEATQQ+L GLNW + KKAK+FFLIGSDYIWP Sbjct: 144 FERDNGLLYYPTFYEGLEQSHNVFYTGQEATQQILWGLNWANQTKKAKSFFLIGSDYIWP 203 Query: 187 RTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAF 245 RTSNKIARKHIE L G VVGEEYYPLG T F SLINKIK+ KPD I+A +VGGSNVAF Sbjct: 204 RTSNKIARKHIEQHLTGCKVVGEEYYPLGTTNFNSLINKIKIAKPDCIYAIIVGGSNVAF 263 Query: 246 YKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFK 305 YKQLKAAG+TA Q LLTISVTEDE+LGIGGEN GFY++MKYF+SLDN NNKKFVA FK Sbjct: 264 YKQLKAAGITADKQFLLTISVTEDEVLGIGGENFAGFYSAMKYFESLDNDNNKKFVAAFK 323 Query: 306 AKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHAN 365 AK+G SVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVK+HAN Sbjct: 324 AKYGPKSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKIHAN 383 Query: 366 HHLWSKTRIGEAQKDGQFKVIYES-DLIEPNPFPKGYQ 402 HHLWS+TRIG+AQ DGQFKV+ ES DLIEPNPFPKGYQ Sbjct: 384 HHLWSRTRIGQAQVDGQFKVVAESPDLIEPNPFPKGYQ 421 >Q13NT4.1 Q13NT4_BURXL Amino acid/amide ABC transporter substrate-binding protein, HAAT family Length = 421 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/398 (84%), Positives = 363/398 (91%), Gaps = 2/398 (0%) Query: 7 AAGAAMAFPGLAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 66 AA A+A G+A AQQFPTAKVNTT LA+TDTEVTVGQLHSATGTMAISETGSIQAERLA Sbjct: 24 AAAPALAMSGIARAQQFPTAKVNTTHLAVTDTEVTVGQLHSATGTMAISETGSIQAERLA 83 Query: 67 IDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPV 126 I+QINS GGILGRKI+IIQEDGASDWPTFAEK+KKLLENDHVAAVFGCWTSASRKAVLP+ Sbjct: 84 IEQINSAGGILGRKIRIIQEDGASDWPTFAEKSKKLLENDHVAAVFGCWTSASRKAVLPI 143 Query: 127 FEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWP 186 FE+DNGLLYYPTFYEGLEQS NVFYTGQEATQQ+L GLNW + KKAK+FFLIGSDYIWP Sbjct: 144 FERDNGLLYYPTFYEGLEQSHNVFYTGQEATQQILWGLNWANQTKKAKSFFLIGSDYIWP 203 Query: 187 RTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAF 245 RTSNKIARKHIE L G VVGEEYYPLG T F SLINKIK+ KPD I+A +VGGSNVAF Sbjct: 204 RTSNKIARKHIEQHLTGCKVVGEEYYPLGTTNFNSLINKIKIAKPDCIYAIIVGGSNVAF 263 Query: 246 YKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFK 305 YKQLKAAG+TA Q LLTISVTEDE+LGIGGEN GFY++MKYF+SLDN NNKKFVA FK Sbjct: 264 YKQLKAAGITADKQFLLTISVTEDEVLGIGGENFAGFYSAMKYFESLDNDNNKKFVAAFK 323 Query: 306 AKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHAN 365 AK+G SVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVK+HAN Sbjct: 324 AKYGPKSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKIHAN 383 Query: 366 HHLWSKTRIGEAQKDGQFKVIYES-DLIEPNPFPKGYQ 402 HHLWS+TRIG+AQ DGQFKV+ ES DLIEPNPFPKGYQ Sbjct: 384 HHLWSRTRIGQAQVDGQFKVVAESPDLIEPNPFPKGYQ 421 >Q87XU7.1 Q87XU7_PSESM Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein Length = 414 Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/377 (87%), Positives = 355/377 (94%) Query: 26 AKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGRKIKIIQ 85 A NTT LA+T TEVTVGQLHSATGTMAISETGSIQAERLAI+QIN+ GGILGR+IK++Q Sbjct: 38 ADANTTGLAVTATEVTVGQLHSATGTMAISETGSIQAERLAIEQINASGGILGRQIKVVQ 97 Query: 86 EDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQ 145 EDGASDWPTFAEKA+KLL D VAAVFGCWTSASRKAVLPVFEK+NGLLYYPTFYEGLEQ Sbjct: 98 EDGASDWPTFAEKARKLLVGDKVAAVFGCWTSASRKAVLPVFEKENGLLYYPTFYEGLEQ 157 Query: 146 SKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIENVLKGSV 205 SKNV YTGQEATQQ+LAGL+W+AKEK AKTF+LIGSDYIWPRTS KIARKHIENVL G+V Sbjct: 158 SKNVIYTGQEATQQILAGLDWIAKEKGAKTFYLIGSDYIWPRTSMKIARKHIENVLHGTV 217 Query: 206 VGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTIS 265 VGE+YYPLGNTQFGSLINK+KLKKPDV+FA VVGGSNVAFYKQLKAAGVT+ QNLLT+S Sbjct: 218 VGEDYYPLGNTQFGSLINKVKLKKPDVVFAAVVGGSNVAFYKQLKAAGVTSTKQNLLTLS 277 Query: 266 VTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQAAYLGP 325 VTEDE+LGIGGEN+EGFYASMKYFQSLDNPNNK FV FKAK+G +SV+GDVTQAAYLGP Sbjct: 278 VTEDELLGIGGENMEGFYASMKYFQSLDNPNNKAFVDAFKAKYGKDSVMGDVTQAAYLGP 337 Query: 326 WLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHANHHLWSKTRIGEAQKDGQFKV 385 WLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVKVH NHHLWSKTRIGE Q +GQFKV Sbjct: 338 WLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEVQANGQFKV 397 Query: 386 IYESDLIEPNPFPKGYQ 402 IYESDLIEPNPFPKGYQ Sbjct: 398 IYESDLIEPNPFPKGYQ 414