BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0133.p         (156 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D4XJK8.1 D4XJK8_9BURK Branched-chain amino acid ABC superfamily ...   146   1e-33
A7IF11.1 A7IF11_XANP2 ABC transporter related                         143   6e-33
D5RMV1.1 D5RMV1_9PROT ABC superfamily ATP binding cassette trans...   143   1e-32
D7A6L3.1 D7A6L3_STAND ABC transporter related protein                 137   6e-31
A3W119.1 A3W119_9RHOB ABC-type transport system ATP-binding prot...   133   8e-30

>D4XJK8.1 D4XJK8_9BURK Branched-chain amino acid ABC superfamily ATP binding
           cassette transporter, ABC protein EC=3.6.3.25
          Length = 218

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 106/185 (57%), Gaps = 37/185 (20%)

Query: 5   LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46
           +L  S + +   G  +  ++N      + + ++G+NGAGKT                   
Sbjct: 1   MLNLSAINVDLAGNRILRDVNASFESSKTIGIVGRNGAGKTTLLRTIMGLTKIKSGKIAF 60

Query: 47  -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87
                              YAPEDRV+FPT TV ENL LPC+V G   +++  R++  L 
Sbjct: 61  DGADLTAMPGHKRAALKVGYAPEDRVIFPTMTVAENLNLPCEVQGQSKSDIAARIQTVLK 120

Query: 88  VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147
           VVPQL+ ML RSG+ALSGGQGK+ AL RA+M GTRL++LDEPFQGLAP LA  Y E+L R
Sbjct: 121 VVPQLEPMLGRSGSALSGGQGKMVALARAIMVGTRLLMLDEPFQGLAPKLARDYTEALGR 180

Query: 148 LREIE 152
           L+E++
Sbjct: 181 LKELQ 185


>A7IF11.1 A7IF11_XANP2 ABC transporter related
          Length = 225

 Score =  143 bits (361), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 106/184 (57%), Gaps = 36/184 (19%)

Query: 5   LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46
           +L    + ++FG + V   ++F+L  GE +A +G+NGAGKT                   
Sbjct: 1   MLILDHVTVSFGTVPVLRGVSFQLREGEAVAFVGRNGAGKTTTLRSIMGFTRNGGRIEFD 60

Query: 47  ------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALTV 88
                             YAPEDR +F  FTVEEN+ LP  V  L + E  RRL++   V
Sbjct: 61  GHDLAGVAAHLRPGLGIGYAPEDRRLFSRFTVEENILLPAQVAKLSSEETKRRLDRVYHV 120

Query: 89  VPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRRL 148
           +P+LKEM  R   ++SGGQGK+ ALGRALM  TRLVLLDEPFQGLAPVLA +Y E+LR L
Sbjct: 121 LPELKEMARRPAGSVSGGQGKMVALGRALMLATRLVLLDEPFQGLAPVLANRYAEALRSL 180

Query: 149 REIE 152
           R+ +
Sbjct: 181 RDTD 184


>D5RMV1.1 D5RMV1_9PROT ABC superfamily ATP binding cassette transporter, ABC
           protein
          Length = 218

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 106/183 (57%), Gaps = 37/183 (20%)

Query: 5   LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46
           +L+  G+ +   G  V   ++  +  G R+A+IG+NGAGKT                   
Sbjct: 1   MLRLEGVSVDIAGASVLRGVSLVVPAGGRVALIGRNGAGKTTTLRALMGLLPLRGGRIAV 60

Query: 47  -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87
                              YAPE+R +F +FTV+ENL LP +VLGLP AE+ RRLE    
Sbjct: 61  DGQDCAAIPAHHRTRLGLGYAPEERRLFGSFTVQENLLLPAEVLGLPRAELQRRLEAVYA 120

Query: 88  VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147
           ++P+L+   PR  A LSGGQGK+ ALGRALM G+R VLLDEPFQGLAP LA +Y E+L R
Sbjct: 121 LLPELRGFAPRKAAGLSGGQGKMVALGRALMVGSRAVLLDEPFQGLAPALALRYAEALAR 180

Query: 148 LRE 150
           LRE
Sbjct: 181 LRE 183


>D7A6L3.1 D7A6L3_STAND ABC transporter related protein
          Length = 226

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 108/185 (58%), Gaps = 37/185 (20%)

Query: 5   LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46
           +L+  G+     G+ V  + + ++  G  +A+IG+NGAGKT                   
Sbjct: 1   MLRLEGVWAEIDGVTVVRDASLDVPAGATVALIGRNGAGKTSLLRLIMGALKLRSGQIHF 60

Query: 47  -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87
                              YAPE+R +  +FT+EENLR P +V+ L  AE+ RRL+    
Sbjct: 61  DGHDLADLPLHHRPSIGIGYAPENRRLNGSFTLEENLRFPGEVIRLSPAELSRRLDLVYA 120

Query: 88  VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147
           V+P+L++M  R  A LSGGQGK+ ALGRAL+AGTRLVLLDEPFQGLAPVLA +YG +LR 
Sbjct: 121 VLPELRDMRERPAAGLSGGQGKMVALGRALVAGTRLVLLDEPFQGLAPVLAQRYGAALRG 180

Query: 148 LREIE 152
           LRE +
Sbjct: 181 LREFD 185


>A3W119.1 A3W119_9RHOB ABC-type transport system ATP-binding protein I
           (Probable substrates branched-chain/neutral amino acids)
           4
          Length = 226

 Score =  133 bits (335), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 36/186 (19%)

Query: 5   LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46
           +L+   +  + G + +  ++ F +   E +A+IG+NGAGKT                   
Sbjct: 1   MLELRNVNASIGIIPILRDLTFRIGAAETVALIGRNGAGKTTLLRTIMGFTTASGEILFE 60

Query: 47  ------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALTV 88
                             YAPEDR +F  FT+EEN+ LP     L  AE  RRL++A TV
Sbjct: 61  GQPINALHPPKRPGLGIGYAPEDRRLFAAFTIEENILLPAQAARLGKAETTRRLDRAYTV 120

Query: 89  VPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRRL 148
           +P+L+++  R G  +SGGQGK+ AL RALM GT+L++LDEPFQGLAP LA +Y E+LR L
Sbjct: 121 LPELRDLAQRPGGTVSGGQGKMVALARALMLGTKLIMLDEPFQGLAPALAQRYAEALRTL 180

Query: 149 REIEYT 154
           R+ + +
Sbjct: 181 RDTDRS 186