BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0116.p (209 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D5NTS8.1 D5NTS8_9BURK Transposase IS116/IS110/IS902 family prote... 223 1e-56 A0Y4N2.1 A0Y4N2_9GAMM ISGsu4, transposase 200 1e-49 A6VRY9.1 A6VRY9_MARMS Transposase IS116/IS110/IS902 family protein 199 2e-49 Q1PVN4.1 Q1PVN4_9BACT Putative uncharacterized protein 189 2e-46 Q1PVC1.1 Q1PVC1_9BACT Putative uncharacterized protein 189 2e-46 >D5NTS8.1 D5NTS8_9BURK Transposase IS116/IS110/IS902 family protein (Fragment) Length = 178 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 105/177 (59%), Positives = 130/177 (73%) Query: 32 KQLTDAQVDAMSFGAAESMGLKANLAVMQALQTQIDAIEKALSKHCRSNPGYRLLKTVSG 91 K L Q+ A F + ++ANLAVMQ LQ QI +EK L + + P Y LL +V G Sbjct: 1 KCLDQTQLGAFGFAPDVELAMQANLAVMQTLQEQIGILEKRLMERVKLKPDYVLLNSVPG 60 Query: 92 IGPILATVILLETGSIERFADVGNYASYCRCVGSVHVSNGKKKGEGNTKNGNRYLAWAYV 151 IGP+LAT I+LETG+I RF +VGN++SYCRCV S SN +KKGEGNTKNGN+YLAWA+V Sbjct: 61 IGPVLATTIMLETGTISRFTEVGNFSSYCRCVDSRRESNSRKKGEGNTKNGNKYLAWAFV 120 Query: 152 EAANFAIRYYEPARKFYQRKKARRNSIVAIKAVAHKLARACFHMLKTGEQFSIERCF 208 EAANFA+R AR+FY+RKK RN IVAIKA+AHKLARAC+HML+ + F + RCF Sbjct: 121 EAANFAMRSCPEARRFYERKKRARNGIVAIKALAHKLARACYHMLREHKPFDVTRCF 177 >A0Y4N2.1 A0Y4N2_9GAMM ISGsu4, transposase Length = 345 Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 139/216 (64%), Gaps = 7/216 (3%) Query: 1 MQLVQQRTTQIVSIETCLAQQTGGRLSTNDVKQLTD-------AQVDAMSFGAAESMGLK 53 M +VQQ T ++S+++C + G +LS+N +KQ+ QV ++ + Sbjct: 130 MDIVQQSTKNLLSVQSCYMRHLGYKLSSNKIKQMAAIRKGVNVEQVHTDFSSTNTALSVI 189 Query: 54 ANLAVMQALQTQIDAIEKALSKHCRSNPGYRLLKTVSGIGPILATVILLETGSIERFADV 113 +NL++++ Q QI+AIE A+ + +P + L ++ GIG LA I+LETG+I+RF Sbjct: 190 SNLSLIRCAQQQINAIESAILQQTSLSPEFINLTSIDGIGNTLALTIMLETGTIKRFDSP 249 Query: 114 GNYASYCRCVGSVHVSNGKKKGEGNTKNGNRYLAWAYVEAANFAIRYYEPARKFYQRKKA 173 GN++SYCRCV SNGKKKG N KNGNRYLAWA+ EAANFAIRY +K+YQRK A Sbjct: 250 GNFSSYCRCVKGARYSNGKKKGATNQKNGNRYLAWAFTEAANFAIRYNPTIKKYYQRKLA 309 Query: 174 RRNSIVAIKAVAHKLARACFHMLKTGEQFSIERCFA 209 + N ++AIK VAHKLARAC+H+LK F + FA Sbjct: 310 KTNQVIAIKTVAHKLARACYHVLKDNVPFDEYKAFA 345 >A6VRY9.1 A6VRY9_MARMS Transposase IS116/IS110/IS902 family protein Length = 336 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/205 (48%), Positives = 138/205 (67%), Gaps = 4/205 (1%) Query: 5 QQRTTQIVSIETCLAQQTGGRLSTNDVKQLT-DAQVDAMSFGAAESMGLKANLAVMQALQ 63 +Q ++ +VSI+ + + G R+S D+++ + D SF + +NL +++AL Sbjct: 134 KQASSHMVSIQNQIWRSLGYRVSCADIRKANFELPFDVGSFLYHSA---HSNLMMLKALD 190 Query: 64 TQIDAIEKALSKHCRSNPGYRLLKTVSGIGPILATVILLETGSIERFADVGNYASYCRCV 123 QID IE+ + ++LL V+GIGPIL ILLETG I RF+ GNYASYCRCV Sbjct: 191 LQIDLIEQQTLSAVKLKDEFKLLTNVTGIGPILGLTILLETGDINRFSAAGNYASYCRCV 250 Query: 124 GSVHVSNGKKKGEGNTKNGNRYLAWAYVEAANFAIRYYEPARKFYQRKKARRNSIVAIKA 183 S+ SNGKKKG GN K GN+YL+WA+ EAA++ +R+ + A++FY+RKK +RN IVAI+A Sbjct: 251 NSIRESNGKKKGTGNRKAGNKYLSWAFSEAAHYLVRFDKKAKRFYERKKQKRNGIVAIRA 310 Query: 184 VAHKLARACFHMLKTGEQFSIERCF 208 VAHKLARA FHMLK + F I+R F Sbjct: 311 VAHKLARAVFHMLKNNQAFDIDRVF 335 >Q1PVN4.1 Q1PVN4_9BACT Putative uncharacterized protein Length = 338 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 143/209 (68%) Query: 1 MQLVQQRTTQIVSIETCLAQQTGGRLSTNDVKQLTDAQVDAMSFGAAESMGLKANLAVMQ 60 M LVQQRT I+S++T + + G +S + +K+L++ +V M +M + + V++ Sbjct: 130 MMLVQQRTVHILSMQTMVNRNKGVPISGDTIKKLSNEEVMGMFSDVHLTMSAQCDHEVIE 189 Query: 61 ALQTQIDAIEKALSKHCRSNPGYRLLKTVSGIGPILATVILLETGSIERFADVGNYASYC 120 L QI IEKA+ K + Y+ L V GIG ILA I+LETG+IERF+DVG Y+SYC Sbjct: 190 VLNKQIYKIEKAVLKEVKLKKPYKKLLKVPGIGEILAMTIMLETGNIERFSDVGMYSSYC 249 Query: 121 RCVGSVHVSNGKKKGEGNTKNGNRYLAWAYVEAANFAIRYYEPARKFYQRKKARRNSIVA 180 RCV + +SNGK KG+GN KNGN+YLAWAYVEAA+F +R+ E RK++QRK ++ + ++A Sbjct: 250 RCVSAKKLSNGKSKGKGNRKNGNKYLAWAYVEAAHFHVRFCEKGRKWHQRKASKSHVVLA 309 Query: 181 IKAVAHKLARACFHMLKTGEQFSIERCFA 209 KA+++KLARAC++++K + ++ F Sbjct: 310 TKALSNKLARACYYIIKEQVNYDEKKMFG 338 >Q1PVC1.1 Q1PVC1_9BACT Putative uncharacterized protein Length = 338 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 143/209 (68%) Query: 1 MQLVQQRTTQIVSIETCLAQQTGGRLSTNDVKQLTDAQVDAMSFGAAESMGLKANLAVMQ 60 M LVQQRT I+S++T + + G +S + +K+L++ +V M +M + + V++ Sbjct: 130 MMLVQQRTAHILSMQTMVNRNKGVPISGDTIKKLSNEEVMGMFSDVHLTMSAQCDHEVIE 189 Query: 61 ALQTQIDAIEKALSKHCRSNPGYRLLKTVSGIGPILATVILLETGSIERFADVGNYASYC 120 L QI IEKA+ K + Y+ L V GIG ILA I+LETG+IERF+DVG Y+SYC Sbjct: 190 VLNKQIYKIEKAVLKEVKLKKPYKKLLKVPGIGEILAMTIMLETGNIERFSDVGMYSSYC 249 Query: 121 RCVGSVHVSNGKKKGEGNTKNGNRYLAWAYVEAANFAIRYYEPARKFYQRKKARRNSIVA 180 RCV + +SNGK KG+GN KNGN+YLAWAYVEAA+F +R+ E RK++QRK ++ + ++A Sbjct: 250 RCVSAKKLSNGKSKGKGNRKNGNKYLAWAYVEAAHFHVRFCEKGRKWHQRKASKSHVVLA 309 Query: 181 IKAVAHKLARACFHMLKTGEQFSIERCFA 209 KA+++KLARAC++++K + ++ F Sbjct: 310 TKALSNKLARACYYIIKEQVNYDEKKMFG 338