BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0087.p (383 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRH3.1 D8IRH3_HERSS ABC-type branched-chain amino acid transpo... 722 0.0 Q21XD9.1 Q21XD9_RHOFD Extracellular ligand-binding receptor 572 e-161 B2T0N2.1 B2T0N2_BURPP Extracellular ligand-binding receptor 566 e-159 Q144F6.1 Q144F6_BURXL Amino acid/amide ABC transporter substrate... 564 e-159 D5NNT2.1 D5NNT2_9BURK Extracellular ligand-binding receptor 564 e-159 >D8IRH3.1 D8IRH3_HERSS ABC-type branched-chain amino acid transport system, periplasmic component protein Length = 383 Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/383 (90%), Positives = 371/383 (96%) Query: 1 MTYKTQALVAAALLSLSLSSQAADPIKIGVSGPFTGGSAPMGVSMRDGVKLAVAEINAAG 60 MTYKTQA VAAAL+SL+L+SQAADPIKIGVSGP+TGGSAPMGVSMRDGVKLAVAEINAAG Sbjct: 1 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG 60 Query: 61 GLLGRQVQLVERDDEAKNERGVQIAQEMINKEKVVATVGYANTGVALASQRFYQEAKIPV 120 GLLGRQ+QL+ERDDEAKNERGVQIAQE+INKEKVVATVG+ NTGVALASQRFYQEAKIPV Sbjct: 61 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV 120 Query: 121 ITNVATGSVVTKQFEKDKDNYIFRTSANDAIQAKMLADEAIDKQKYTKVAILADSTNYGQ 180 I NVATG+V+TKQFEK+KDNY+FRTSA D IQAKM+ADEA+DKQK+TKVAILADSTNYGQ Sbjct: 121 INNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQ 180 Query: 181 LGREDLEKALAAKKITPVAIEKYNLKDVDMTAQLLKSKQGGAQVVLTYGIGPELAQIANG 240 LGREDLEK LA KK+TPVA+EKYN+KDVDMTAQLLKSKQGGAQ VLTYGIGPELAQIANG Sbjct: 181 LGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANG 240 Query: 241 MEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGDTPKRKSFIEAYQKAYKV 300 MEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDG+TPKRK+FIEAYQKAYKV Sbjct: 241 MEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKV 300 Query: 301 DRMPSAVSAAQGYDSILLLAAAIKQAGSTDGEKVRGALESLNTKIEGVVTTYNKPFTRDD 360 DRMPSAVSAAQGYDSILLLAAAIKQAG+TDG+KVR ALE+LNTK+EGVVTTY+KPFT DD Sbjct: 301 DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDD 360 Query: 361 HEAIKANMVVMGEVKNGRVVLGK 383 HEAIK MVVMGEVKNGRV+LGK Sbjct: 361 HEAIKPAMVVMGEVKNGRVILGK 383 >Q21XD9.1 Q21XD9_RHOFD Extracellular ligand-binding receptor Length = 399 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 278/378 (73%), Positives = 322/378 (85%), Gaps = 1/378 (0%) Query: 3 YKTQALVAAALLSLSLSSQAADPIKIGVSGPFTGGSAPMGVSMRDGVKLAVAEINAAGGL 62 ++T AL + AL S+S AAD IKIG+ GP TGGS+PMGVSMRDG KLAV EINA GGL Sbjct: 4 FRTIALSSVALAVASMS-MAADNIKIGLQGPLTGGSSPMGVSMRDGAKLAVTEINAHGGL 62 Query: 63 LGRQVQLVERDDEAKNERGVQIAQEMINKEKVVATVGYANTGVALASQRFYQEAKIPVIT 122 LGR+++++ERDDEAKNERGVQIAQE+INKEKVVATVGY N+GVALASQRFYQEAKIPV+ Sbjct: 63 LGRKIEMIERDDEAKNERGVQIAQELINKEKVVATVGYINSGVALASQRFYQEAKIPVMN 122 Query: 123 NVATGSVVTKQFEKDKDNYIFRTSANDAIQAKMLADEAIDKQKYTKVAILADSTNYGQLG 182 NVAT + +T+QF NY+FR SAND IQ+ ++ +E I ++KYTKVAILADSTNYGQLG Sbjct: 123 NVATATTITQQFADQPQNYVFRNSANDTIQSTLIVEEVIGRRKYTKVAILADSTNYGQLG 182 Query: 183 REDLEKALAAKKITPVAIEKYNLKDVDMTAQLLKSKQGGAQVVLTYGIGPELAQIANGME 242 R DLEKALAAK ITPVA EKYN+KDVDMT QLLK+K+ GAQVV+TYGIGPELAQIANGM Sbjct: 183 RADLEKALAAKGITPVATEKYNIKDVDMTPQLLKAKEAGAQVVITYGIGPELAQIANGMI 242 Query: 243 KLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGDTPKRKSFIEAYQKAYKVDR 302 KL W VP++GSW LSMGNFIDN+GKN + A MPQTFIQ+G+TPKRKSFI+AYQK YKV R Sbjct: 243 KLGWKVPMMGSWTLSMGNFIDNAGKNADDALMPQTFIQEGNTPKRKSFIDAYQKTYKVTR 302 Query: 303 MPSAVSAAQGYDSILLLAAAIKQAGSTDGEKVRGALESLNTKIEGVVTTYNKPFTRDDHE 362 +PS VSAAQGYDSI LLAAAIKQAGST+G KV ALE L T +EGVVTTYNKPF++ DHE Sbjct: 303 IPSPVSAAQGYDSIYLLAAAIKQAGSTEGPKVLAALEDLKTPVEGVVTTYNKPFSKADHE 362 Query: 363 AIKANMVVMGEVKNGRVV 380 AI NM V+G+V++G VV Sbjct: 363 AITLNMPVIGKVQDGHVV 380 >B2T0N2.1 B2T0N2_BURPP Extracellular ligand-binding receptor Length = 405 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 279/383 (72%), Positives = 322/383 (84%), Gaps = 3/383 (0%) Query: 1 MTYKTQALVAA-ALLSLSLSSQAADPIKIGVSGPFTGGSAPMGVSMRDGVKLAVAEINAA 59 M + +++V A AL +L+ S AADPIKIGV GPFTGGS+ MGVSMRDGV+LA AEIN A Sbjct: 1 MGIRLKSVVGALALCALANVSYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKA 60 Query: 60 GGLLGRQVQLVERDDEAKNERGVQIAQEMINKEKVVATVGYANTGVALASQRFYQEAKIP 119 GG+LGRQ+ LVERDDEAKNERGVQIAQE+INKEKVVA VGY NTGVALASQRF+QEAKIP Sbjct: 61 GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIP 120 Query: 120 VITNVATGSVVTKQFEKDKDNYIFRTSANDAIQAKMLADEAIDKQKYTKVAILADSTNYG 179 V NVATGS+VTKQF DNY+FR +A D IQA M+ +EA+ K+ + KVAILADSTNYG Sbjct: 121 VFNNVATGSIVTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTKRGFKKVAILADSTNYG 180 Query: 180 QLGREDLEKALAAKKITPVAIEKYNLKDVDMTAQLLKSKQGGAQVVLTYGIGPELAQIAN 239 QLGREDLEKALAAK + PVA+EK+N+KDVDMTAQLLK+K+ GA+ VLTYGIGPELAQIAN Sbjct: 181 QLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN 240 Query: 240 GMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGDTPKRKSFIEAYQKAYK 299 GM KL W VP+IGSW LSM N+IDN+ NG GARMPQTFIQ+ +TPKRK+FI+AY K +K Sbjct: 241 GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKTFIDAYLKEFK 300 Query: 300 V--DRMPSAVSAAQGYDSILLLAAAIKQAGSTDGEKVRGALESLNTKIEGVVTTYNKPFT 357 +R+ S VSAAQGYDS+ LLAAAI QAGSTDG KVR ALE+LNTK+EGVV Y+KPFT Sbjct: 301 PKNNRIDSPVSAAQGYDSVYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFT 360 Query: 358 RDDHEAIKANMVVMGEVKNGRVV 380 DDHEAI N+ V+GEVK GRVV Sbjct: 361 HDDHEAISPNVPVVGEVKGGRVV 383 >Q144F6.1 Q144F6_BURXL Amino acid/amide ABC transporter substrate-binding protein, HAAT family Length = 405 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 279/383 (72%), Positives = 321/383 (83%), Gaps = 3/383 (0%) Query: 1 MTYKTQALVAA-ALLSLSLSSQAADPIKIGVSGPFTGGSAPMGVSMRDGVKLAVAEINAA 59 M + +++V A AL +L+ AADPIKIGV GPFTGGS+ MGVSMRDGV+LA AEIN A Sbjct: 1 MGIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKA 60 Query: 60 GGLLGRQVQLVERDDEAKNERGVQIAQEMINKEKVVATVGYANTGVALASQRFYQEAKIP 119 GG+LGRQ+ LVERDDEAKNERGVQIAQE+INKEKVVA VGY NTGVALASQRF+QEAKIP Sbjct: 61 GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIP 120 Query: 120 VITNVATGSVVTKQFEKDKDNYIFRTSANDAIQAKMLADEAIDKQKYTKVAILADSTNYG 179 V NVATGSVVTKQF DNY+FR +A D IQA M+ +EA+ ++ + KVAILADSTNYG Sbjct: 121 VFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTRRGFRKVAILADSTNYG 180 Query: 180 QLGREDLEKALAAKKITPVAIEKYNLKDVDMTAQLLKSKQGGAQVVLTYGIGPELAQIAN 239 QLGREDLEKALAAK + PVA+EK+N+KDVDMTAQLLK+K+ GA+ VLTYGIGPELAQIAN Sbjct: 181 QLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN 240 Query: 240 GMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGDTPKRKSFIEAYQKAYK 299 GM KL W VP+IGSW LSM N+IDN+ NG GARMPQTFIQ+ +TPKRK+FI+AY K +K Sbjct: 241 GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFK 300 Query: 300 V--DRMPSAVSAAQGYDSILLLAAAIKQAGSTDGEKVRGALESLNTKIEGVVTTYNKPFT 357 +R+ S VSAAQGYDSI LLAAAI QAGSTDG KVR ALE+LNTK+EGVV Y+KPFT Sbjct: 301 PKNNRIDSPVSAAQGYDSIYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFT 360 Query: 358 RDDHEAIKANMVVMGEVKNGRVV 380 DDHEAI N+ V+GEVK GRVV Sbjct: 361 HDDHEAISPNVPVVGEVKGGRVV 383 >D5NNT2.1 D5NNT2_9BURK Extracellular ligand-binding receptor Length = 405 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 279/383 (72%), Positives = 321/383 (83%), Gaps = 3/383 (0%) Query: 1 MTYKTQALVAA-ALLSLSLSSQAADPIKIGVSGPFTGGSAPMGVSMRDGVKLAVAEINAA 59 M + +++V A AL +L+ AADPIKIGV GPFTGGS+ MGVSMRDGV+LA AEIN A Sbjct: 1 MGIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKA 60 Query: 60 GGLLGRQVQLVERDDEAKNERGVQIAQEMINKEKVVATVGYANTGVALASQRFYQEAKIP 119 GG+LGRQ+ LVERDDEAKNERGVQIAQE+INKEKVVA VGY NTGVALASQRF+QEAKIP Sbjct: 61 GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIP 120 Query: 120 VITNVATGSVVTKQFEKDKDNYIFRTSANDAIQAKMLADEAIDKQKYTKVAILADSTNYG 179 V NVATGSVVTKQF DNY+FR +A D IQA M+ +EA+ ++ + KVAILADSTNYG Sbjct: 121 VFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTRRGFRKVAILADSTNYG 180 Query: 180 QLGREDLEKALAAKKITPVAIEKYNLKDVDMTAQLLKSKQGGAQVVLTYGIGPELAQIAN 239 QLGREDLEKALAAK + PVA+EK+N+KDVDMTAQLLK+K+ GA+ VLTYGIGPELAQIAN Sbjct: 181 QLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN 240 Query: 240 GMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGDTPKRKSFIEAYQKAYK 299 GM KL W VP+IGSW LSM N+IDN+ NG GARMPQTFIQ+ +TPKRK+FI+AY K +K Sbjct: 241 GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFK 300 Query: 300 V--DRMPSAVSAAQGYDSILLLAAAIKQAGSTDGEKVRGALESLNTKIEGVVTTYNKPFT 357 +R+ S VSAAQGYDSI LLAAAI QAGSTDG KVR ALE+LNTK+EGVV Y+KPFT Sbjct: 301 PKNNRIDSPVSAAQGYDSIYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFT 360 Query: 358 RDDHEAIKANMVVMGEVKNGRVV 380 DDHEAI N+ V+GEVK GRVV Sbjct: 361 HDDHEAISPNVPVVGEVKGGRVV 383