BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0079.p (692 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISD9.1 D8ISD9_HERSS Phenylalanyl-tRNA synthetase beta chain pr... 587 e-165 A6SY35.1 A6SY35_JANMA Phenylalanyl-tRNA synthetase beta chain EC... 523 e-146 A4G614.1 A4G614_HERAR Phenylalanyl-tRNA synthetase beta chain (P... 521 e-145 F1VZX5.1 F1VZX5_9BURK Phenylalanyl-tRNA synthetase beta chain 506 e-141 D8ISD8.1 D8ISD8_HERSS Phenylalanyl-tRNA synthetase alpha chain E... 497 e-138 >D8ISD9.1 D8ISD9_HERSS Phenylalanyl-tRNA synthetase beta chain protein EC=6.1.1.20 Length = 808 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 282/307 (91%), Positives = 295/307 (96%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSARELKLSEDHGGLLELPDDAPVGQNFRDY LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSARELKLSEDHGGLLELPDDAPVGQNFRDYLQLNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLK PTFQ+ AVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK Sbjct: 181 AREVSALTGTPLKAPTFQSAAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWG+KGE +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGRKGESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 EVDEWVGVI+DDKELESLAGIMGGDAT+VSL+TTNIYLEAAFWFPQAIQGRARRYNFSTD Sbjct: 301 EVDEWVGVISDDKELESLAGIMGGDATAVSLDTTNIYLEAAFWFPQAIQGRARRYNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPDTKVGPVDDQIVNLPKREPVKVRTARAT 436 AAHRFERGVDFATVV+HIERITALL+EICGT +T+VGPVDDQIVNLPKR PV++RTARA Sbjct: 361 AAHRFERGVDFATVVDHIERITALLLEICGTAETRVGPVDDQIVNLPKRAPVQLRTARAA 420 Query: 437 KVIGVAI 443 KVIGV I Sbjct: 421 KVIGVEI 427 >A6SY35.1 A6SY35_JANMA Phenylalanyl-tRNA synthetase beta chain EC=6.1.1.20 Length = 809 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 248/308 (80%), Positives = 277/308 (89%), Gaps = 1/308 (0%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSARELKLS++ GGL++LP DAPVGQNFRDY+ LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSARELKLSDEQGGLMDLPADAPVGQNFRDYYQLNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLK PTFQ VA + + LPV+ISAPDLCGRF+GR+IRGLNA+A TP WMK Sbjct: 181 AREVSALTGTPLKAPTFQPVAATITDVLPVKISAPDLCGRFSGRIIRGLNARAQTPDWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRP+HVFDL KI+G LDVRWGK GE +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPTHVFDLSKINGGLDVRWGKAGESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VDEWVGVIAD+KE+ESLAGIMGGDA++VSL+T +IYLEAAFW+P AIQGR RR+NFSTD Sbjct: 301 AVDEWVGVIADEKEIESLAGIMGGDASAVSLDTQDIYLEAAFWYPNAIQGRGRRFNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPD-TKVGPVDDQIVNLPKREPVKVRTARA 435 AAHRFERGVDFAT VEH+ERITAL++EICG D TKVGP+DD +VNLPKRE V VRTARA Sbjct: 361 AAHRFERGVDFATTVEHMERITALIVEICGQKDLTKVGPIDDHVVNLPKREAVSVRTARA 420 Query: 436 TKVIGVAI 443 KVIGV + Sbjct: 421 VKVIGVPL 428 >A4G614.1 A4G614_HERAR Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) EC=6.1.1.20 Length = 809 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 244/308 (79%), Positives = 278/308 (90%), Gaps = 1/308 (0%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CS +ELKLS++ GGL++LP DAP+GQNFRDY+ LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSVKELKLSDEQGGLMDLPSDAPIGQNFRDYYQLNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLK PT+Q VA + + LPV +SAPDLCGRF+GR+IRGLNA+A+TP WMK Sbjct: 181 AREVSALTGTPLKMPTYQAVAATIADVLPVTVSAPDLCGRFSGRIIRGLNARASTPDWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRP+HVFDLDKIHG L+VRWGKK E +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPTHVFDLDKIHGGLNVRWGKKDESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VDEW+GVIAD++++ESLAGIMGGDAT+VSL+T +IYLEAAFW+P AIQGRARR+NFSTD Sbjct: 301 AVDEWIGVIADEQQIESLAGIMGGDATAVSLDTQDIYLEAAFWYPNAIQGRARRFNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPD-TKVGPVDDQIVNLPKREPVKVRTARA 435 AAHRFERGVDFAT VEHIERITAL++EICG D T VGP+DD IVNLPKR+PV VRTARA Sbjct: 361 AAHRFERGVDFATTVEHIERITALIVEICGQKDKTAVGPIDDHIVNLPKRDPVSVRTARA 420 Query: 436 TKVIGVAI 443 KVIGV + Sbjct: 421 VKVIGVPL 428 >F1VZX5.1 F1VZX5_9BURK Phenylalanyl-tRNA synthetase beta chain Length = 809 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 245/345 (71%), Positives = 288/345 (83%), Gaps = 23/345 (6%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSA+ELKLS+++ GL++LPDDAPVGQNFRDYF LNDLKFTIKLTPNKADCLS+LGV Sbjct: 121 QGMLCSAKELKLSDENSGLIDLPDDAPVGQNFRDYFQLNDLKFTIKLTPNKADCLSILGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT LK+PT+Q VAV + + LPV+ISAPDLCGRF+GR+IRGLNAKAATP+WMK Sbjct: 181 AREVSALTGCALKKPTYQPVAVTMADILPVKISAPDLCGRFSGRIIRGLNAKAATPEWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQR I+ALVDISNYVMLELG+P+HVFDL KIHG LDVRWG+ GE +KLLNGNTV Sbjct: 241 QRLERSGQRSIAALVDISNYVMLELGQPTHVFDLSKIHGGLDVRWGRVGEALKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VD+WVGVIAD++E+ESLAGIMGGDAT+V+L+T +IYLEAAFWFPQAIQGRARRYNFST+ Sbjct: 301 TVDDWVGVIADEQEIESLAGIMGGDATAVTLDTQDIYLEAAFWFPQAIQGRARRYNFSTE 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICG-TPDTKVGPVDDQIVNLPKREPVKVRTARA 435 AAHRFERGVDFAT V+ IERITAL++EICG T T VGP+DDQ NLP R PV +RT+RA Sbjct: 361 AAHRFERGVDFATTVDSIERITALIVEICGQTGITMVGPIDDQTANLPSRLPVSLRTSRA 420 Query: 436 TKVIGVAIXRTARATKVIGVAKGGIHPVMRSWERVEEIFRSIGFD 480 +K+IGV + E++ EIF +GF+ Sbjct: 421 SKIIGVPF----------------------TDEQIAEIFSRLGFE 443 >D8ISD8.1 D8ISD8_HERSS Phenylalanyl-tRNA synthetase alpha chain EC=6.1.1.20 Length = 372 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 240/284 (84%), Positives = 250/284 (88%), Gaps = 6/284 (2%) Query: 415 VDDQIVNLPKREPVKVRTARATKVIGVAIXRTARATKV------IGVAKGGIHPVMRSWE 468 V I+N+ K + TAR + + A + G GGIHPVMRSW+ Sbjct: 89 VQGAIINVAKEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQ 148 Query: 469 RVEEIFRSIGFDVADGPEIETDWTNFSALNSPENHPARSMQDTFYIEGNDTQGKPLLLRT 528 RVEEIFRSIGFDVADGPEIETDWTNF+ALNSPENHPARSMQDTFYIEGND+QGKPLLLRT Sbjct: 149 RVEEIFRSIGFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDSQGKPLLLRT 208 Query: 529 HTSPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYL 588 HTSPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYL Sbjct: 209 HTSPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYL 268 Query: 589 NFVKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPSVVRNM 648 NFVKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHP+VVRNM Sbjct: 269 NFVKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNM 328 Query: 649 GLDPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 692 GLDPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN Sbjct: 329 GLDPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 372