BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0048.p         (142 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IY53.1 D8IY53_HERSS Permease of the major facilitator superfam...   189   1e-46
Q0K1V2.1 Q0K1V2_CUPNH MFS transporter, DHA1 family                    151   3e-35
B3RA15.1 B3RA15_CUPTR Bicyclomycin resistance protein ;Sulfonami...   151   3e-35
E4PI85.1 E4PI85_MARAH Drug resistance transporter, Bcr/CflA fami...   144   5e-33
B5SF79.1 B5SF79_RALSO Drug transport protein                          143   7e-33

>D8IY53.1 D8IY53_HERSS Permease of the major facilitator superfamily protein
          Length = 406

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 106/117 (90%)

Query: 1   MAALTAMGALSIDMYLPSFSFIAKDLGVASNTIQLTLSTFLIGLALGQMFYGPISDRFGR 60
           +A LTAMGAL+IDMYLPSF+ IA+DLGV +N +QLTL+TFLIG+A+GQMFYGP+SDRFGR
Sbjct: 20  LAGLTAMGALAIDMYLPSFTAIAQDLGVGTNQVQLTLATFLIGVAVGQMFYGPLSDRFGR 79

Query: 61  KPPLYFGICLYVVSSIGCTFAPNLETLLVLRFFQGLGGSSGMVIPRAVVRDKMGADG 117
           KPPL+FGI LY V S+ C FA N+ETL+VLR FQGLGGS+GMVIPRA+VRD+MGA+G
Sbjct: 80  KPPLFFGIALYFVCSLLCIFAQNIETLIVLRLFQGLGGSAGMVIPRAMVRDRMGAEG 136


>Q0K1V2.1 Q0K1V2_CUPNH MFS transporter, DHA1 family
          Length = 401

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 89/114 (78%)

Query: 3   ALTAMGALSIDMYLPSFSFIAKDLGVASNTIQLTLSTFLIGLALGQMFYGPISDRFGRKP 62
           +L A+  LSIDMYLPSF  +A DLGV    +QLTL TFL+GLALGQ FYGP SDRFGRKP
Sbjct: 22  SLMAIAPLSIDMYLPSFPSLAGDLGVDIGQVQLTLGTFLVGLALGQAFYGPFSDRFGRKP 81

Query: 63  PLYFGICLYVVSSIGCTFAPNLETLLVLRFFQGLGGSSGMVIPRAVVRDKMGAD 116
           PLY G+CLYV +++GC  A ++E+L++ RF Q LGG +GMV+ RAV+RD++ A 
Sbjct: 82  PLYVGLCLYVAAAVGCALARSVESLMLWRFLQALGGCAGMVMARAVIRDRLEAH 135


>B3RA15.1 B3RA15_CUPTR Bicyclomycin resistance protein ;Sulfonamide
           resistance protein; MFS family
          Length = 407

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 89/114 (78%)

Query: 3   ALTAMGALSIDMYLPSFSFIAKDLGVASNTIQLTLSTFLIGLALGQMFYGPISDRFGRKP 62
           +L A+  LSIDMYLPSF  +A DLGV    +QLTL  FL+GLALGQ FYGP SDRFGRKP
Sbjct: 22  SLMAIAPLSIDMYLPSFPTLAGDLGVDIGQVQLTLGAFLVGLALGQAFYGPFSDRFGRKP 81

Query: 63  PLYFGICLYVVSSIGCTFAPNLETLLVLRFFQGLGGSSGMVIPRAVVRDKMGAD 116
           PLY G+CLYV++++GC  A N+E+L++ RF Q LGG +GMV+ RAV+RD++ A 
Sbjct: 82  PLYVGLCLYVLAAMGCALARNVESLMLWRFLQALGGCAGMVMARAVIRDRLEAH 135


>E4PI85.1 E4PI85_MARAH Drug resistance transporter, Bcr/CflA family protein
          Length = 398

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 88/112 (78%)

Query: 1   MAALTAMGALSIDMYLPSFSFIAKDLGVASNTIQLTLSTFLIGLALGQMFYGPISDRFGR 60
           +A LTA+  LS+D+YLP+F  IA+ L V S  IQ+TL+ +L+G+A+GQ+ YGP+SD FGR
Sbjct: 17  LAMLTALSPLSVDLYLPAFPAIAESLNVNSAQIQVTLAAYLLGMAVGQLLYGPLSDHFGR 76

Query: 61  KPPLYFGICLYVVSSIGCTFAPNLETLLVLRFFQGLGGSSGMVIPRAVVRDK 112
           KPPLYFG+ LYV++S  C FA +L TL + RF Q LGGSSG+VI RAV+RD+
Sbjct: 77  KPPLYFGLALYVLASFACVFASDLTTLTIARFVQALGGSSGVVISRAVIRDR 128


>B5SF79.1 B5SF79_RALSO Drug transport protein
          Length = 385

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 85/117 (72%)

Query: 1   MAALTAMGALSIDMYLPSFSFIAKDLGVASNTIQLTLSTFLIGLALGQMFYGPISDRFGR 60
           + ALTA+G LS+DMYLPS   IA+DL  +S    +TL+ FLI LA+GQ+ YGP SDRFGR
Sbjct: 3   LGALTAIGPLSVDMYLPSLPTIARDLKTSSAAAGITLTAFLISLAIGQLIYGPASDRFGR 62

Query: 61  KPPLYFGICLYVVSSIGCTFAPNLETLLVLRFFQGLGGSSGMVIPRAVVRDKMGADG 117
           KPPLY G+ LYV +SIGC FA +  TL VLR  QG GG +GMVI RA VRD+M   G
Sbjct: 63  KPPLYIGLALYVAASIGCAFAADAGTLAVLRAVQGFGGCAGMVISRAAVRDRMDPAG 119