BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0172.p         (84 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IPX5.1 D8IPX5_HERSS 30S ribosomal protein S16                       158   3e-37
A6SVI4.1 A6SVI4_JANMA 30S ribosomal protein S16                       156   8e-37
A4G2T5.1 RS16_HERAR 30S ribosomal protein S16                         155   2e-36
F1VV83.1 F1VV83_9BURK SSU ribosomal protein S16p                      151   3e-35
Q1LQE2.1 Q1LQE2_RALME 30S ribosomal protein S16                       147   6e-34

>D8IPX5.1 D8IPX5_HERSS 30S ribosomal protein S16
          Length = 84

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/84 (90%), Positives = 81/84 (96%)

Query: 1  MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERLGFYNPVASGKEESFRIAQDRLAHW 60
          MVVIRLARGGAKKRPF+NIVATDSRNRRDGRFIER+GFYNPVASGKEE+ RIA DRLAHW
Sbjct: 1  MVVIRLARGGAKKRPFYNIVATDSRNRRDGRFIERIGFYNPVASGKEETVRIAADRLAHW 60

Query: 61 EGVGAQLSPTVARLVSEAGKKAAA 84
          +GVGAQLSPTVARLV+EAG KAAA
Sbjct: 61 QGVGAQLSPTVARLVAEAGSKAAA 84


>A6SVI4.1 A6SVI4_JANMA 30S ribosomal protein S16
          Length = 160

 Score =  156 bits (395), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/83 (90%), Positives = 80/83 (96%)

Query: 1   MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERLGFYNPVASGKEESFRIAQDRLAHW 60
           MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIER+GFYNPVASG EES RI QDRLA+W
Sbjct: 78  MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERIGFYNPVASGAEESVRIVQDRLAYW 137

Query: 61  EGVGAQLSPTVARLVSEAGKKAA 83
           +GVGAQLSPTVARLV++AGKKAA
Sbjct: 138 QGVGAQLSPTVARLVAQAGKKAA 160


>A4G2T5.1 RS16_HERAR 30S ribosomal protein S16
          Length = 83

 Score =  155 bits (391), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/83 (90%), Positives = 80/83 (96%)

Query: 1  MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERLGFYNPVASGKEESFRIAQDRLAHW 60
          MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIER+GFYNPVASG EES RIAQDRLA+W
Sbjct: 1  MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERIGFYNPVASGAEESVRIAQDRLAYW 60

Query: 61 EGVGAQLSPTVARLVSEAGKKAA 83
          +GVGAQLSPTVARLV++AGK AA
Sbjct: 61 QGVGAQLSPTVARLVAQAGKAAA 83


>F1VV83.1 F1VV83_9BURK SSU ribosomal protein S16p
          Length = 83

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 77/83 (92%)

Query: 1  MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERLGFYNPVASGKEESFRIAQDRLAHW 60
          MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIER+GFYNPVASG EES RIAQDRL +W
Sbjct: 1  MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERIGFYNPVASGAEESVRIAQDRLTYW 60

Query: 61 EGVGAQLSPTVARLVSEAGKKAA 83
          EGVGAQLSPTVARLV++  K AA
Sbjct: 61 EGVGAQLSPTVARLVAQVAKAAA 83


>Q1LQE2.1 Q1LQE2_RALME 30S ribosomal protein S16
          Length = 109

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 70/83 (84%), Positives = 77/83 (92%)

Query: 1   MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERLGFYNPVASGKEESFRIAQDRLAHW 60
           MVVIRLARGG+KKRPFFNIVATDSRNRRDGRFIER+GFYNP+AS KEE  R+ QDRLA+W
Sbjct: 27  MVVIRLARGGSKKRPFFNIVATDSRNRRDGRFIERIGFYNPLASEKEEGLRVVQDRLAYW 86

Query: 61  EGVGAQLSPTVARLVSEAGKKAA 83
           +GVGAQLSPTVARLV +AGK AA
Sbjct: 87  QGVGAQLSPTVARLVKQAGKAAA 109