BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0152.p (415 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPZ0.1 D8IPZ0_HERSS Cation/multidrug efflux pump transmembrane... 651 0.0 A3RNS0.1 A3RNS0_RALSO Transmembrane drug efflux pump 557 e-156 B5SDJ7.1 B5SDJ7_RALSO Putative drug efflux pump transmembrane pr... 557 e-156 B5S5S5.1 B5S5S5_RALSO Multidrug efflux system transmembrane prot... 557 e-156 Q8XQM4.1 Q8XQM4_RALSO Probable drug efflux pump transmembrane pr... 556 e-156 >D8IPZ0.1 D8IPZ0_HERSS Cation/multidrug efflux pump transmembrane protein Length = 1048 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/356 (91%), Positives = 338/356 (94%) Query: 1 MNPSRLFILRPVATSLLMLAILLVGIVAYKQLPLSALPEVDYPTIQVVTLYPGASPDVMT 60 MNPSR FILRPVATSLLMLAILLVGIVAY+ LPLSALPEVDYPTIQVVTLYPGASPDVMT Sbjct: 1 MNPSRQFILRPVATSLLMLAILLVGIVAYRLLPLSALPEVDYPTIQVVTLYPGASPDVMT 60 Query: 61 SSVTAPLERQFGQMPGLNQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGGNLLP 120 SSVTAPLERQFGQMPGL QMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAG NLLP Sbjct: 61 SSVTAPLERQFGQMPGLKQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGSNLLP 120 Query: 121 SDLPAPPIYSKVNPADTPILTLAVTSRTLPLPRVQDLIDTRLAQKISQLSGVGLVSLSGG 180 SDLP PP+YSKVNPADTPI+TLAVTS T+PLP+VQDLIDTR+AQKISQLSGVGLVSLSGG Sbjct: 121 SDLPMPPVYSKVNPADTPIITLAVTSNTMPLPKVQDLIDTRIAQKISQLSGVGLVSLSGG 180 Query: 181 QRPAVRMQLNPRAIAALGMNLDDIRTAIGNANVNQAKGSFDGPARASTIDANDQLKSADE 240 QRPAVRMQLNPRA+AALG+NLDD+RTAIGNANVNQAKGSFDGP RASTIDANDQL+SADE Sbjct: 181 QRPAVRMQLNPRAVAALGLNLDDVRTAIGNANVNQAKGSFDGPTRASTIDANDQLRSADE 240 Query: 241 YRNLIIGYKNGAPIRVSDVADVVDAAENVRLGAWANDSAAVIVNIQRQPGANVIAVVDSI 300 YRNLII YKNGAPIRVSDVADVVD AENVRLGAWAN AVIVNIQRQPGANVIAVVDSI Sbjct: 241 YRNLIIAYKNGAPIRVSDVADVVDGAENVRLGAWANTQPAVIVNIQRQPGANVIAVVDSI 300 Query: 301 KKILPTLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSIVLVVMVIXELLLSI 356 KKILP LQASLPGAIDVHILTDRTTTIRASVDDVKFELLLS+ LVVMVI L ++ Sbjct: 301 KKILPQLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSVALVVMVIFVFLRNV 356 >A3RNS0.1 A3RNS0_RALSO Transmembrane drug efflux pump Length = 1048 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 269/356 (75%), Positives = 318/356 (89%) Query: 1 MNPSRLFILRPVATSLLMLAILLVGIVAYKQLPLSALPEVDYPTIQVVTLYPGASPDVMT 60 MNPSR+FILRPVAT+LLM+AILL G+VAY+ LPLSALPEVDYPTIQV TLYPGASPDVMT Sbjct: 1 MNPSRIFILRPVATTLLMVAILLSGLVAYRMLPLSALPEVDYPTIQVTTLYPGASPDVMT 60 Query: 61 SSVTAPLERQFGQMPGLNQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGGNLLP 120 SS+TAPLERQFGQMPGL QM+S+SSGGASVITLQF+L LSLDIAEQEVQAAINA GNLLP Sbjct: 61 SSITAPLERQFGQMPGLKQMTSSSSGGASVITLQFDLSLSLDIAEQEVQAAINAAGNLLP 120 Query: 121 SDLPAPPIYSKVNPADTPILTLAVTSRTLPLPRVQDLIDTRLAQKISQLSGVGLVSLSGG 180 +DLP PPIYSKVNPAD PILTLA+TS+TLPLP+++D++DTR+AQK+SQL G+GLVS+SGG Sbjct: 121 TDLPMPPIYSKVNPADAPILTLAITSKTLPLPKLEDIVDTRVAQKLSQLPGIGLVSISGG 180 Query: 181 QRPAVRMQLNPRAIAALGMNLDDIRTAIGNANVNQAKGSFDGPARASTIDANDQLKSADE 240 QRPAVR+Q N +A+AALG+++DDIRTAIGNANVN AKGSFDGP RASTIDANDQL+SA E Sbjct: 181 QRPAVRIQANTQALAALGLSIDDIRTAIGNANVNGAKGSFDGPLRASTIDANDQLRSAAE 240 Query: 241 YRNLIIGYKNGAPIRVSDVADVVDAAENVRLGAWANDSAAVIVNIQRQPGANVIAVVDSI 300 Y +I+ YKNGAPIR++DVA ++D AEN +L AWAN + A+I+N+QRQPGANVI VV+ Sbjct: 241 YSTMIVAYKNGAPIRLTDVAQIIDGAENSKLAAWANATPAIILNVQRQPGANVIDVVNRA 300 Query: 301 KKILPTLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSIVLVVMVIXELLLSI 356 K +LP L+ +LP IDV +LTDRTTTIRASV DV+FEL+LS+ LVVMVI L ++ Sbjct: 301 KALLPQLKDTLPATIDVAVLTDRTTTIRASVADVQFELMLSVALVVMVIFLFLRNV 356 >B5SDJ7.1 B5SDJ7_RALSO Putative drug efflux pump transmembrane protein Length = 740 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 269/356 (75%), Positives = 318/356 (89%) Query: 1 MNPSRLFILRPVATSLLMLAILLVGIVAYKQLPLSALPEVDYPTIQVVTLYPGASPDVMT 60 MNPSR+FILRPVAT+LLM+AILL G+VAY+ LPLSALPEVDYPTIQV TLYPGASPDVMT Sbjct: 1 MNPSRIFILRPVATTLLMVAILLSGLVAYRMLPLSALPEVDYPTIQVTTLYPGASPDVMT 60 Query: 61 SSVTAPLERQFGQMPGLNQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGGNLLP 120 SS+TAPLERQFGQMPGL QM+S+SSGGASVITLQF+L LSLDIAEQEVQAAINA GNLLP Sbjct: 61 SSITAPLERQFGQMPGLKQMTSSSSGGASVITLQFDLSLSLDIAEQEVQAAINAAGNLLP 120 Query: 121 SDLPAPPIYSKVNPADTPILTLAVTSRTLPLPRVQDLIDTRLAQKISQLSGVGLVSLSGG 180 +DLP PPIYSKVNPAD PILTLA+TS+TLPLP+++D++DTR+AQK+SQL G+GLVS+SGG Sbjct: 121 TDLPMPPIYSKVNPADAPILTLAITSKTLPLPKLEDIVDTRVAQKLSQLPGIGLVSISGG 180 Query: 181 QRPAVRMQLNPRAIAALGMNLDDIRTAIGNANVNQAKGSFDGPARASTIDANDQLKSADE 240 QRPAVR+Q N +A+AALG+++DDIRTAIGNANVN AKGSFDGP RASTIDANDQL+SA E Sbjct: 181 QRPAVRIQANTQALAALGLSIDDIRTAIGNANVNGAKGSFDGPLRASTIDANDQLRSAAE 240 Query: 241 YRNLIIGYKNGAPIRVSDVADVVDAAENVRLGAWANDSAAVIVNIQRQPGANVIAVVDSI 300 Y +I+ YKNGAPIR++DVA ++D AEN +L AWAN + A+I+N+QRQPGANVI VV+ Sbjct: 241 YSTMIVAYKNGAPIRLTDVAQIIDGAENSKLAAWANATPAIILNVQRQPGANVIDVVNRA 300 Query: 301 KKILPTLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSIVLVVMVIXELLLSI 356 K +LP L+ +LP IDV +LTDRTTTIRASV DV+FEL+LS+ LVVMVI L ++ Sbjct: 301 KALLPQLKDTLPATIDVAVLTDRTTTIRASVADVQFELMLSVALVVMVIFLFLRNV 356 >B5S5S5.1 B5S5S5_RALSO Multidrug efflux system transmembrane protein (Partial sequence) (Fragment) Length = 2721 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 269/356 (75%), Positives = 318/356 (89%) Query: 1 MNPSRLFILRPVATSLLMLAILLVGIVAYKQLPLSALPEVDYPTIQVVTLYPGASPDVMT 60 MNPSR+FILRPVAT+LLM+AILL G+VAY+ LPLSALPEVDYPTIQV TLYPGASPDVMT Sbjct: 1 MNPSRIFILRPVATTLLMVAILLSGLVAYRMLPLSALPEVDYPTIQVTTLYPGASPDVMT 60 Query: 61 SSVTAPLERQFGQMPGLNQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGGNLLP 120 SS+TAPLERQFGQMPGL QM+S+SSGGASVITLQF+L LSLDIAEQEVQAAINA GNLLP Sbjct: 61 SSITAPLERQFGQMPGLKQMTSSSSGGASVITLQFDLSLSLDIAEQEVQAAINAAGNLLP 120 Query: 121 SDLPAPPIYSKVNPADTPILTLAVTSRTLPLPRVQDLIDTRLAQKISQLSGVGLVSLSGG 180 +DLP PPIYSKVNPAD PILTLA+TS+TLPLP+++D++DTR+AQK+SQL G+GLVS+SGG Sbjct: 121 TDLPMPPIYSKVNPADAPILTLAITSKTLPLPKLEDIVDTRVAQKLSQLPGIGLVSISGG 180 Query: 181 QRPAVRMQLNPRAIAALGMNLDDIRTAIGNANVNQAKGSFDGPARASTIDANDQLKSADE 240 QRPAVR+Q N +A+AALG+++DDIRTAIGNANVN AKGSFDGP RASTIDANDQL+SA E Sbjct: 181 QRPAVRIQANTQALAALGLSIDDIRTAIGNANVNGAKGSFDGPLRASTIDANDQLRSAAE 240 Query: 241 YRNLIIGYKNGAPIRVSDVADVVDAAENVRLGAWANDSAAVIVNIQRQPGANVIAVVDSI 300 Y +I+ YKNGAPIR++DVA ++D AEN +L AWAN + A+I+N+QRQPGANVI VV+ Sbjct: 241 YSTMIVAYKNGAPIRLTDVAQIIDGAENSKLAAWANATPAIILNVQRQPGANVIDVVNRA 300 Query: 301 KKILPTLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSIVLVVMVIXELLLSI 356 K +LP L+ +LP IDV +LTDRTTTIRASV DV+FEL+LS+ LVVMVI L ++ Sbjct: 301 KALLPQLKDTLPATIDVAVLTDRTTTIRASVADVQFELMLSVALVVMVIFLFLRNV 356 >Q8XQM4.1 Q8XQM4_RALSO Probable drug efflux pump transmembrane protein Length = 1041 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 271/356 (76%), Positives = 317/356 (89%) Query: 1 MNPSRLFILRPVATSLLMLAILLVGIVAYKQLPLSALPEVDYPTIQVVTLYPGASPDVMT 60 MNPSR+FILRPVAT+LLM+AILL G+VAY+ LPLSALPEVDYPTIQV TLYPGASPDVMT Sbjct: 1 MNPSRIFILRPVATTLLMVAILLSGLVAYRMLPLSALPEVDYPTIQVTTLYPGASPDVMT 60 Query: 61 SSVTAPLERQFGQMPGLNQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGGNLLP 120 SS+TAPLERQFGQMPGL QM+S SSGGASVITLQF+L LSLDIAEQEVQAAINA GNLLP Sbjct: 61 SSITAPLERQFGQMPGLKQMTSASSGGASVITLQFDLSLSLDIAEQEVQAAINAAGNLLP 120 Query: 121 SDLPAPPIYSKVNPADTPILTLAVTSRTLPLPRVQDLIDTRLAQKISQLSGVGLVSLSGG 180 +DLP PPIYSKVNPAD PILTLA+TSRTLPLP+++D++DTR+AQK+SQL G+GLVS+SGG Sbjct: 121 TDLPMPPIYSKVNPADAPILTLAITSRTLPLPKLEDIVDTRVAQKLSQLPGIGLVSISGG 180 Query: 181 QRPAVRMQLNPRAIAALGMNLDDIRTAIGNANVNQAKGSFDGPARASTIDANDQLKSADE 240 QRPAVR+Q N +A+AALG+++DDIRTAIGNANVN AKGSFDGP RASTIDANDQL+SA E Sbjct: 181 QRPAVRIQANTQALAALGLSIDDIRTAIGNANVNGAKGSFDGPMRASTIDANDQLRSAAE 240 Query: 241 YRNLIIGYKNGAPIRVSDVADVVDAAENVRLGAWANDSAAVIVNIQRQPGANVIAVVDSI 300 Y +I+ YKNGAPIR++DVA ++D AEN +L AWAN + A+I+N+QRQPGANVI VV+ Sbjct: 241 YGTMIVAYKNGAPIRLTDVAQIIDGAENSKLAAWANTTPAIILNVQRQPGANVIDVVNRA 300 Query: 301 KKILPTLQASLPGAIDVHILTDRTTTIRASVDDVKFELLLSIVLVVMVIXELLLSI 356 K +LP L+ +LP IDV +LTDRTTTIRASV DV+FELLL++ LVVMVI L +I Sbjct: 301 KALLPQLKDTLPANIDVAVLTDRTTTIRASVADVQFELLLAVALVVMVIFLFLRNI 356