BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0127.p         (184 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9CHY7.1 B9CHY7_9BURK Fimbrial protein                                124   4e-27
B9BW71.1 B9BW71_9BURK Fimbrial protein                                124   4e-27
B9BDK6.1 B9BDK6_9BURK Fimbrial protein                                122   2e-26
F0G2A6.1 F0G2A6_9BURK Fimbrial protein                                121   5e-26
F2LRX1.1 F2LRX1_BURGA Fimbrial protein                                120   8e-26

>B9CHY7.1 B9CHY7_9BURK Fimbrial protein
          Length = 179

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 20/190 (10%)

Query: 3   KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55
           K  L SL+AVAA    AP+VS AA+G ITF GTI AQTC I+G   G P+F V +P V  
Sbjct: 2   KATLRSLVAVAAFASLAPSVSHAANGEITFTGTIKAQTCKISGNNSGNPNFTVALPPVSI 61

Query: 56  TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115
           TAL   G++AG       I+LT CS       A G V   FE G T++  +  L N+ GT
Sbjct: 62  TALDQGGKSAG--RTPFTISLTNCSP------ATGNVYTHFEPGDTINTASGNLINAEGT 113

Query: 116 ATNVQVGLINQDGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVAT-GAATAGTVI 174
           AT ++V ++N D + + +G+A++N++ V L     +GAATL Y ++YVA  G ATAG+V 
Sbjct: 114 ATPIEVNVLNADTSIIKLGSANENSKPVALQ----NGAATLAYFAQYVAVGGPATAGSVK 169

Query: 175 TSVQYSLDFQ 184
           TSV YS+ +Q
Sbjct: 170 TSVMYSIAYQ 179


>B9BW71.1 B9BW71_9BURK Fimbrial protein
          Length = 179

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 20/190 (10%)

Query: 3   KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55
           K  L SL+AVAA    AP+VS AA+G ITF GTI AQTC I+G   G P+F V +P V  
Sbjct: 2   KATLRSLVAVAAFASLAPSVSHAANGEITFTGTIKAQTCKISGNNSGNPNFTVALPPVSI 61

Query: 56  TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115
           TAL   G++AG       I+LT CS       A G V   FE G T++  +  L N+ GT
Sbjct: 62  TALDQGGKSAG--RTPFTISLTNCSP------ATGNVYTHFEPGDTINTASGNLINAEGT 113

Query: 116 ATNVQVGLINQDGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVAT-GAATAGTVI 174
           AT ++V ++N D + + +G+A++N++ V L     +GAATL Y ++YVA  G ATAG+V 
Sbjct: 114 ATPIEVNVLNADTSIIKLGSANENSKPVALQ----NGAATLAYFAQYVAVGGPATAGSVK 169

Query: 175 TSVQYSLDFQ 184
           TSV YS+ +Q
Sbjct: 170 TSVMYSIAYQ 179


>B9BDK6.1 B9BDK6_9BURK Fimbrial protein
          Length = 180

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 116/191 (60%), Gaps = 21/191 (10%)

Query: 3   KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55
           K  L SL+AVAA    AP+VS AADG ITF GT+ AQTC ING   G  +F V +P V  
Sbjct: 2   KATLRSLVAVAAFASLAPSVSHAADGQITFTGTVKAQTCQINGNNSGGKNFTVTLPPVSI 61

Query: 56  TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115
           T+LA  G TAG    +  I+LT CS       A G V   FE   T++  +  L N  GT
Sbjct: 62  TSLAQGGTTAG--RTAFTISLTNCS------PATGNVYTHFEPSDTINTASGNLINKEGT 113

Query: 116 ATNVQVGLINQ-DGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVATGA-ATAGTV 173
           A+NV+VG++N  D + + +G+A++N++ V L     +GAATL Y ++YVA G  ATAGTV
Sbjct: 114 ASNVEVGVLNNPDTSTIKLGSANENSKPVAL----DNGAATLAYYAQYVAMGGPATAGTV 169

Query: 174 ITSVQYSLDFQ 184
            TS  YS+ +Q
Sbjct: 170 KTSALYSIIYQ 180


>F0G2A6.1 F0G2A6_9BURK Fimbrial protein
          Length = 180

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 21/191 (10%)

Query: 3   KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55
           K  L +L+AVAA    AP+VS A DG ITF GTI AQTC ING   G+ +F V +P V  
Sbjct: 2   KATLRTLVAVAAFASLAPSVSHATDGQITFTGTIKAQTCQINGNGTGSKNFTVALPPVSI 61

Query: 56  TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115
           T+LA  G TAG    +  I+LT CS       A G V   FE   T++  +  L N+ GT
Sbjct: 62  TSLAQGGTTAG--RTAFTISLTNCS------PATGNVYTHFEPSDTINTASGNLLNTEGT 113

Query: 116 ATNVQVGLINQ-DGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVATGA-ATAGTV 173
           A+NV+VG++N  D + + +G+A++N++ V L     +GAATL Y ++YVA G  ATAGTV
Sbjct: 114 ASNVEVGVLNNPDTSIIKLGSANENSKPVALE----NGAATLAYYAQYVAMGGPATAGTV 169

Query: 174 ITSVQYSLDFQ 184
            TS  YS+ +Q
Sbjct: 170 KTSALYSIVYQ 180


>F2LRX1.1 F2LRX1_BURGA Fimbrial protein
          Length = 179

 Score =  120 bits (301), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 113/165 (68%), Gaps = 15/165 (9%)

Query: 21  AADGTITFNGTITAQTCTINGGTPSFAVNMPRVPTTALAAAGQTAGVVNDSIRITLTGCS 80
           AADGTITF G+++AQTCTIN GT  F V +P V   ALA+AGQTAG    S  I LTGCS
Sbjct: 23  AADGTITFTGSVSAQTCTINSGTKDFTVTLPTVSANALASAGQTAG--RASFNIALTGCS 80

Query: 81  QNGASPAANGAVRAFFEGGPTVDATTRRLRNSTG--TATNVQVGLINQDGTDVAVGA--A 136
                 A +G V AFFE G TVD++T +L   +G  +ATNV++GL+N D + + +GA  A
Sbjct: 81  ------AKSGTVHAFFEPGSTVDSSTGQLIVQSGKDSATNVEIGLLNDDLSVIQIGAADA 134

Query: 137 SQNTQYVPLAGAAGSGAATLVYGSKYVATGAATAGTVITSVQYSL 181
           SQN++ V +   + +G ATL + ++Y+ATGAATAGT  +SV Y+L
Sbjct: 135 SQNSKPVTI---SATGDATLKFYAQYIATGAATAGTAKSSVMYTL 176