BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0110.p (329 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITG5.1 D8ITG5_HERSS Phenylacetic acid degradation protein 623 e-176 B3RBC9.1 B3RBC9_CUPTR Subunit of multicomponent oxygenase, pheny... 599 e-169 Q46UU1.1 Q46UU1_CUPPJ Phenylacetate-CoA oxygenase, PaaG subunit 589 e-166 Q0K1H2.1 Q0K1H2_CUPNH Phenylacetic acid degradation protein A 588 e-166 D4X9P8.1 D4X9P8_9BURK Phenylacetate-CoA oxygenase subunit PaaA 570 e-160 >D8ITG5.1 D8ITG5_HERSS Phenylacetic acid degradation protein Length = 328 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 288/328 (87%), Positives = 311/328 (94%) Query: 1 MYAQLVETGLKNVRSADEMSEEERAFQARIDDGVKIEPKDWMPDAYRKTLIRQVSQHAHS 60 MYAQ+VETGL VR D+MS EERAFQARI+ GVKIEPKDWMP+AYRKTL+RQ+SQHAHS Sbjct: 1 MYAQMVETGLSKVRGLDDMSPEERAFQARIEAGVKIEPKDWMPEAYRKTLVRQISQHAHS 60 Query: 61 EIVGQLPEANWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVTRDQLLADLHSGK 120 EIVGQLPE NWVTRAPTL+RKA+L+AKIQDEAGHGLYLYSAAETLGV+RD LL +LH+G+ Sbjct: 61 EIVGQLPEGNWVTRAPTLQRKAILMAKIQDEAGHGLYLYSAAETLGVSRDDLLDELHAGR 120 Query: 121 AKYSSIFNYPTLSWADMGAIGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFHARQ 180 AKYSSIFNYP LSWADMGAIGWLVDGSAIINQIPLCRCSYGPY+RAMVRVCKEESFHARQ Sbjct: 121 AKYSSIFNYPALSWADMGAIGWLVDGSAIINQIPLCRCSYGPYSRAMVRVCKEESFHARQ 180 Query: 181 GYDIMMSLCKGTPEQKQMAQDALNRWWWPSLMMFGPSDAASVNSAQSAQWRIKLFSNDEL 240 GYDIM++LC+GTPEQKQMAQDALNRWWWP+LMMFGPSDA SVNSAQS QWRIKLFSNDEL Sbjct: 181 GYDIMLALCRGTPEQKQMAQDALNRWWWPALMMFGPSDAESVNSAQSMQWRIKLFSNDEL 240 Query: 241 RQRMVDQTVPQAEYLGLTVPDPDLKWNEETGRYDFGAIDWEEFHNVLRGNGPCNRERLQT 300 RQRMVDQT+PQ EYLGLTVPDPDLKWNEE GRYDFGAI+W+EFHNVLRGNGPCNRERL T Sbjct: 241 RQRMVDQTIPQIEYLGLTVPDPDLKWNEERGRYDFGAINWDEFHNVLRGNGPCNRERLAT 300 Query: 301 RKKAYDDGAWFRDALVAHADKKQTAQAA 328 RKKAYDDGAWFRDALVAHADK+ T +AA Sbjct: 301 RKKAYDDGAWFRDALVAHADKRATRKAA 328 >B3RBC9.1 B3RBC9_CUPTR Subunit of multicomponent oxygenase, phenylacetic acid degradation; ring-hydroxylating complex protein 1 Length = 332 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 280/332 (84%), Positives = 304/332 (91%), Gaps = 3/332 (0%) Query: 1 MYAQLVETGLKNVRSADEMSEEERAFQARIDDGVKIEPKDWMPDAYRKTLIRQVSQHAHS 60 MYAQLVETG +R+ +EM +ERAFQAR+DDG+KIE KDWMP+AYRKTL+RQ+SQHAHS Sbjct: 1 MYAQLVETGATRLRAMEEMDPQERAFQARVDDGIKIEAKDWMPEAYRKTLVRQISQHAHS 60 Query: 61 EIVGQLPEANWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVTRDQLLADLHSGK 120 EIVGQLPE NWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGV+RDQ+L DLHSGK Sbjct: 61 EIVGQLPEGNWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVSRDQMLGDLHSGK 120 Query: 121 AKYSSIFNYPTLSWADMGAIGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFHARQ 180 AKYSSIFNYPTLSWAD+G IGWLVDGSAIINQ+PLCRCSYGPYARAMVRVCKEESFH RQ Sbjct: 121 AKYSSIFNYPTLSWADIGMIGWLVDGSAIINQVPLCRCSYGPYARAMVRVCKEESFHQRQ 180 Query: 181 GYDIMMSLCKGTPEQKQMAQDALNRWWWPSLMMFGPSDAASVNSAQSAQWRIKLFSNDEL 240 GYDI++ LC GTPEQKQMAQDALNRWWWP+LMMFGPSD S NSAQS QWRIKLFSNDEL Sbjct: 181 GYDILLKLCNGTPEQKQMAQDALNRWWWPALMMFGPSDGDSPNSAQSMQWRIKLFSNDEL 240 Query: 241 RQRMVDQTVPQAEYLGLTVPDPDLKWNEETGRYDFGAIDWEEFHNVLRGNGPCNRERLQT 300 RQ+MVDQTVPQAEYLGLT+PDP LKWNEE G YDFG IDW EF+NV++GNGPCNR+RL+T Sbjct: 241 RQKMVDQTVPQAEYLGLTIPDPKLKWNEERGHYDFGEIDWSEFYNVIQGNGPCNRDRLRT 300 Query: 301 RKKAYDDGAWFRDALVAHADK---KQTAQAAA 329 R KA+DDGAWFRDALVAHADK KQ QAAA Sbjct: 301 RVKAWDDGAWFRDALVAHADKQAGKQPQQAAA 332 >Q46UU1.1 Q46UU1_CUPPJ Phenylacetate-CoA oxygenase, PaaG subunit Length = 327 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 272/327 (83%), Positives = 303/327 (92%) Query: 1 MYAQLVETGLKNVRSADEMSEEERAFQARIDDGVKIEPKDWMPDAYRKTLIRQVSQHAHS 60 MYAQLV+TG +R+ +EM +ER FQAR+D G+KIE KDWMP+AYRKTLIRQ+SQHAHS Sbjct: 1 MYAQLVDTGATRLRAMEEMDPQEREFQARVDAGIKIEAKDWMPEAYRKTLIRQISQHAHS 60 Query: 61 EIVGQLPEANWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVTRDQLLADLHSGK 120 EI+GQLPE NWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLG +RD+LL DLHSGK Sbjct: 61 EIIGQLPEGNWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGASRDELLGDLHSGK 120 Query: 121 AKYSSIFNYPTLSWADMGAIGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFHARQ 180 AKYSSIFNYPTLSWAD+GAIGWLVDGSAIINQ+PLCRCS+GPYARAMVRVCKEESFH RQ Sbjct: 121 AKYSSIFNYPTLSWADIGAIGWLVDGSAIINQVPLCRCSFGPYARAMVRVCKEESFHQRQ 180 Query: 181 GYDIMMSLCKGTPEQKQMAQDALNRWWWPSLMMFGPSDAASVNSAQSAQWRIKLFSNDEL 240 GYDI++ LC+GT EQKQMAQDALNRWWWP+LMMFGPSDA S NSAQS +WRIKLFSNDEL Sbjct: 181 GYDILLKLCQGTAEQKQMAQDALNRWWWPALMMFGPSDADSPNSAQSMKWRIKLFSNDEL 240 Query: 241 RQRMVDQTVPQAEYLGLTVPDPDLKWNEETGRYDFGAIDWEEFHNVLRGNGPCNRERLQT 300 RQ+MVDQTVPQAEYLGLT+PDPDLKWNEE G YDFGAI+W+EF+NVLRGNGPCNR+RL+T Sbjct: 241 RQKMVDQTVPQAEYLGLTIPDPDLKWNEERGHYDFGAINWDEFYNVLRGNGPCNRDRLRT 300 Query: 301 RKKAYDDGAWFRDALVAHADKKQTAQA 327 R KA+DDGAWFR+ALVA ADK++ A A Sbjct: 301 RVKAWDDGAWFREALVARADKQERAAA 327 >Q0K1H2.1 Q0K1H2_CUPNH Phenylacetic acid degradation protein A Length = 328 Score = 588 bits (1515), Expect = e-166, Method: Compositional matrix adjust. Identities = 272/329 (82%), Positives = 301/329 (91%), Gaps = 1/329 (0%) Query: 1 MYAQLVETGLKNVRSADEMSEEERAFQARIDDGVKIEPKDWMPDAYRKTLIRQVSQHAHS 60 MYAQLVETG +R+ +EM +ER FQAR+D G+KIE KDWMP+AYRKTL+RQ+SQHAHS Sbjct: 1 MYAQLVETGATRLRAMEEMEPQEREFQARVDAGIKIEAKDWMPEAYRKTLVRQISQHAHS 60 Query: 61 EIVGQLPEANWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVTRDQLLADLHSGK 120 EIVGQLPE NWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGV+RDQ+L DLH+GK Sbjct: 61 EIVGQLPEGNWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVSRDQMLGDLHTGK 120 Query: 121 AKYSSIFNYPTLSWADMGAIGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFHARQ 180 AKYSSIFNYPTLSWAD+G IGWLVDGSAIINQ+PLCRCS+GPYARAMVRVCKEESFH RQ Sbjct: 121 AKYSSIFNYPTLSWADIGMIGWLVDGSAIINQVPLCRCSFGPYARAMVRVCKEESFHQRQ 180 Query: 181 GYDIMMSLCKGTPEQKQMAQDALNRWWWPSLMMFGPSDAASVNSAQSAQWRIKLFSNDEL 240 GYDI++SLC GTPEQKQMAQDALNRWWWP+LMMFGPSD S NSAQS QWRIKLFSNDEL Sbjct: 181 GYDILLSLCNGTPEQKQMAQDALNRWWWPALMMFGPSDGDSPNSAQSMQWRIKLFSNDEL 240 Query: 241 RQRMVDQTVPQAEYLGLTVPDPDLKWNEETGRYDFGAIDWEEFHNVLRGNGPCNRERLQT 300 RQ+MVDQTVPQAEYLGL +PDP+LKWNEE G YDFG IDW EF+NV++GNGPCNRERL+T Sbjct: 241 RQKMVDQTVPQAEYLGLAIPDPELKWNEERGHYDFGEIDWSEFYNVIQGNGPCNRERLRT 300 Query: 301 RKKAYDDGAWFRDALVAHADKKQTAQAAA 329 R KA+++GAWFRDALV HAD KQ +AAA Sbjct: 301 RVKAWEEGAWFRDALVTHAD-KQAQRAAA 328 >D4X9P8.1 D4X9P8_9BURK Phenylacetate-CoA oxygenase subunit PaaA Length = 329 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 264/329 (80%), Positives = 295/329 (89%), Gaps = 1/329 (0%) Query: 1 MYAQLVETGLKNVRSADEMSEEERAFQARIDDGVKIEPKDWMPDAYRKTLIRQVSQHAHS 60 MYAQLVETG+K V++AD++ E+AFQ RIDDGV+IE KDWMPDAYRKTL+RQ+SQHAHS Sbjct: 1 MYAQLVETGVKQVKTADQLEGPEQAFQRRIDDGVRIEAKDWMPDAYRKTLVRQISQHAHS 60 Query: 61 EIVGQLPEANWVTRAPTLERKAVLLAKIQDEAGHGLYLYSAAETLGVTRDQLLADLHSGK 120 EIVG LPE NW+TRAP+L+RKA+LLAK+QDEAGHGLYLYSAAETLGV+RD L+ DLH+G+ Sbjct: 61 EIVGMLPEGNWITRAPSLKRKAILLAKVQDEAGHGLYLYSAAETLGVSRDDLIDDLHAGR 120 Query: 121 AKYSSIFNYPTLSWADMGAIGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFHARQ 180 AKYSSIFNYPTLSWAD+G IGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFH RQ Sbjct: 121 AKYSSIFNYPTLSWADIGMIGWLVDGSAIINQIPLCRCSYGPYARAMVRVCKEESFHQRQ 180 Query: 181 GYDIMMSLC-KGTPEQKQMAQDALNRWWWPSLMMFGPSDAASVNSAQSAQWRIKLFSNDE 239 GYD++M +C GTPEQK M QD+LNRWWWP+LMMFGPSDA S NSAQS W+IKLFSNDE Sbjct: 181 GYDLLMQMCLHGTPEQKAMVQDSLNRWWWPALMMFGPSDADSPNSAQSMAWKIKLFSNDE 240 Query: 240 LRQRMVDQTVPQAEYLGLTVPDPDLKWNEETGRYDFGAIDWEEFHNVLRGNGPCNRERLQ 299 LRQ+MVDQTVPQAEYLGLTVPDPDLKWN E G YDFG IDW EF+ VL+GNGPCNRERL Sbjct: 241 LRQKMVDQTVPQAEYLGLTVPDPDLKWNAERGHYDFGEIDWSEFYAVLKGNGPCNRERLA 300 Query: 300 TRKKAYDDGAWFRDALVAHADKKQTAQAA 328 R KA++DGAW RDALVAHADKK +AA Sbjct: 301 ARVKAHEDGAWVRDALVAHADKKAQRKAA 329