BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0100.p         (111 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9R2M8.1 B9R2M8_9RHOB Cache domain family                             117   5e-25
F1VWG5.1 F1VWG5_9BURK Putative uncharacterized protein                117   6e-25
B8DPH4.1 B8DPH4_DESVM Putative cache sensor protein                   115   2e-24
C4XL27.1 C4XL27_DESMR Putative uncharacterized protein                115   2e-24
E1K0Q3.1 E1K0Q3_DESFR Putative cache sensor protein                   112   3e-23

>B9R2M8.1 B9R2M8_9RHOB Cache domain family
          Length = 152

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 2   KQQGKDAALADFSRPTPAFKQRDLYINVIDLSGNTLAHGENAKLIGRNLIDLKDADGKLF 61
           +  G D ALADFS     ++ RDLY+   D +G T+AHG NAKLIGR+L  LKDADGK F
Sbjct: 45  QSAGADTALADFSATDKGWQDRDLYVFCFDDAGVTVAHGANAKLIGRDLSGLKDADGKEF 104

Query: 62  IKQFVDTAKGGGKGWIDYRWPNPVTAVLEEKTTYIEEVNGLVIGCGIYK 110
           + + V T K GG GW+DYRWPNPV+  +E K++ ++     + G GIYK
Sbjct: 105 VMELVSTGKSGG-GWVDYRWPNPVSKKIEPKSSVVKSAGDHICGVGIYK 152


>F1VWG5.1 F1VWG5_9BURK Putative uncharacterized protein
          Length = 155

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 78/113 (69%), Gaps = 3/113 (2%)

Query: 1   VKQQGKDAALADFSRPTPAFKQRDLYINVIDLSGN--TLAHGENAKLIGRNLIDLKDADG 58
           +K+ GK+ A A+FS+    F  RDLYI     +G+   LAHG N KLIG+NL+DL+DADG
Sbjct: 43  LKENGKEKAFAEFSKTDGPFVDRDLYIFAYSAAGDGTNLAHGANPKLIGKNLLDLRDADG 102

Query: 59  KLFIKQFVDTAKG-GGKGWIDYRWPNPVTAVLEEKTTYIEEVNGLVIGCGIYK 110
           K  +K F++ A    G GW+DY+W NP+T  +E KT+Y+E+V  +++G G+YK
Sbjct: 103 KAIVKNFIEVANSKTGSGWVDYKWANPLTKAVEAKTSYVEKVGDVILGSGVYK 155


>B8DPH4.1 B8DPH4_DESVM Putative cache sensor protein
          Length = 152

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 74/110 (67%)

Query: 1   VKQQGKDAALADFSRPTPAFKQRDLYINVIDLSGNTLAHGENAKLIGRNLIDLKDADGKL 60
           +K  G+D ALA+ S P   F  RDLY+ V D+ G  LAHG NAK +G+NL++L+D DGK 
Sbjct: 43  LKANGRDKALAEISNPQGMFVDRDLYVVVYDMQGTCLAHGANAKQVGKNLMELRDPDGKY 102

Query: 61  FIKQFVDTAKGGGKGWIDYRWPNPVTAVLEEKTTYIEEVNGLVIGCGIYK 110
           F+K+ V+  K     W DY++ NP T ++E K+ Y+E V+ L++GCG Y+
Sbjct: 103 FVKERVELGKTKASFWQDYKFSNPQTKLIEPKSMYMERVDDLLVGCGAYQ 152


>C4XL27.1 C4XL27_DESMR Putative uncharacterized protein
          Length = 365

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/110 (47%), Positives = 74/110 (67%)

Query: 1   VKQQGKDAALADFSRPTPAFKQRDLYINVIDLSGNTLAHGENAKLIGRNLIDLKDADGKL 60
           +K  GKD   A  + P   +  RDLY+ V DLSG  LAHG N K IG++L++L+D DGK 
Sbjct: 254 IKADGKDQTFAVINAPGGPYHDRDLYVVVYDLSGKCLAHGANPKQIGKDLLELRDPDGKF 313

Query: 61  FIKQFVDTAKGGGKGWIDYRWPNPVTAVLEEKTTYIEEVNGLVIGCGIYK 110
           F+K+ V+ AK     W DY++ NPVT  +E K+ Y+E+V+ +++GCGIYK
Sbjct: 314 FVKERVEMAKTQPSFWQDYKFLNPVTRQIEPKSMYLEKVDDMLVGCGIYK 363


>E1K0Q3.1 E1K0Q3_DESFR Putative cache sensor protein
          Length = 153

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 74/110 (67%)

Query: 1   VKQQGKDAALADFSRPTPAFKQRDLYINVIDLSGNTLAHGENAKLIGRNLIDLKDADGKL 60
           +K  G++ A A    P   F+ RDLY+ V DL G  LAHG N+K IG++LI L+D DGK 
Sbjct: 43  IKADGREKAFAAIDDPKGPFRDRDLYVVVYDLQGKCLAHGANSKQIGKDLIGLRDPDGKF 102

Query: 61  FIKQFVDTAKGGGKGWIDYRWPNPVTAVLEEKTTYIEEVNGLVIGCGIYK 110
           F+K+ V+ AK     W DY++ NP+T ++E K+ Y+E+V  +++GCGIYK
Sbjct: 103 FVKERVELAKTHDSFWQDYKFINPMTKLIEPKSMYMEKVGDILVGCGIYK 152