BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0071.p         (141 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7DLC0.1 D7DLC0_METS0 Transcriptional regulator, MarR family          140   6e-32
B8ESK9.1 B8ESK9_METSB Transcriptional regulator, MarR family          131   3e-29
B9JB37.1 B9JB37_AGRRK Transcriptional regulator protein               108   3e-22
D5NMY4.1 D5NMY4_9BURK Transcriptional regulator, MarR family          107   7e-22
Q7NEL8.1 Q7NEL8_GLOVI MarR family transcriptional regulatory pro...   106   1e-21

>D7DLC0.1 D7DLC0_METS0 Transcriptional regulator, MarR family
          Length = 158

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/134 (58%), Positives = 96/134 (71%)

Query: 1   MPTLLINRLSRALLKPVDDRLREVGISTSQLPVLVALKDGSKRTQKELAELAGVEQPSMA 60
           MP++LI+  +RAL +  D +LR++GISTSQ PVLVALKDG+K TQKELA LA VEQPSMA
Sbjct: 13  MPSILISHAARALARRADTKLRDIGISTSQFPVLVALKDGAKLTQKELALLANVEQPSMA 72

Query: 61  QLLGRMERDNLIVREASPTDRRSSLVSLTEHAHQLLEPGRVVLREIDQDVCVVLSREEKE 120
           QLL RMERD LI REA P D RSSL+SLT+ A  L  P R +L + +Q+  V     E E
Sbjct: 73  QLLTRMERDGLIRREADPNDGRSSLISLTDKAISLFSPVRAILTQGNQEALVGFDESEIE 132

Query: 121 LLVGLLQRLIKNLA 134
            LV LL R+I N+ 
Sbjct: 133 QLVALLHRVIGNVG 146


>B8ESK9.1 B8ESK9_METSB Transcriptional regulator, MarR family
          Length = 149

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 94/132 (71%)

Query: 2   PTLLINRLSRALLKPVDDRLREVGISTSQLPVLVALKDGSKRTQKELAELAGVEQPSMAQ 61
           P    +R++R+L +  D RL ++G++T+QLPVL ALKDG  R+Q ELA  A VEQP+MAQ
Sbjct: 12  PGHYFSRIARSLARIGDARLGKLGLATAQLPVLTALKDGESRSQTELARWAKVEQPTMAQ 71

Query: 62  LLGRMERDNLIVREASPTDRRSSLVSLTEHAHQLLEPGRVVLREIDQDVCVVLSREEKEL 121
           LL RMERD +I RE  P DRRSSLVSLT+ A  LL  GR +LR  ++++   LS +E E 
Sbjct: 72  LLARMERDGMIQREPDPDDRRSSLVSLTKKAKSLLPAGRAILRRSNEEMTRGLSPDEVET 131

Query: 122 LVGLLQRLIKNL 133
           LV LL+R++ N+
Sbjct: 132 LVSLLRRVLANI 143


>B9JB37.1 B9JB37_AGRRK Transcriptional regulator protein
          Length = 151

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 85/132 (64%)

Query: 2   PTLLINRLSRALLKPVDDRLREVGISTSQLPVLVALKDGSKRTQKELAELAGVEQPSMAQ 61
           P  LIN  SR+  +  + R++ +G S  QLPVL  L++G++ +QKELA+ A +EQPSMAQ
Sbjct: 10  PAPLINMASRSFARLGERRVKALGFSIGQLPVLYLLRNGARMSQKELAKFAKIEQPSMAQ 69

Query: 62  LLGRMERDNLIVREASPTDRRSSLVSLTEHAHQLLEPGRVVLREIDQDVCVVLSREEKEL 121
           +L RMERD LI R   P D RSSLVSLTE A   L   R  L E  + V    + +E ++
Sbjct: 70  MLARMERDGLIRRTPDPADGRSSLVSLTEAALAKLPAARDALDEGREMVLAGFNDDEVQM 129

Query: 122 LVGLLQRLIKNL 133
           L+ L++RL +NL
Sbjct: 130 LLQLMRRLNRNL 141


>D5NMY4.1 D5NMY4_9BURK Transcriptional regulator, MarR family
          Length = 154

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 82/132 (62%)

Query: 2   PTLLINRLSRALLKPVDDRLREVGISTSQLPVLVALKDGSKRTQKELAELAGVEQPSMAQ 61
           P  LI ++SRA  + VD  LR++G +  QLPVLV LK     +Q ELA +A VEQ SMAQ
Sbjct: 13  PMRLIGQVSRAFARLVDAPLRQLGFAIGQLPVLVTLKKAGALSQAELARMAQVEQSSMAQ 72

Query: 62  LLGRMERDNLIVREASPTDRRSSLVSLTEHAHQLLEPGRVVLREIDQDVCVVLSREEKEL 121
           LL RMERDNL+ R   P D RS L+SLT  A + +  G++++ E+ +      + EE+  
Sbjct: 73  LLNRMERDNLVRRVPDPADGRSRLISLTARASRQMPNGKLIMDEVCETALTGFTSEERSQ 132

Query: 122 LVGLLQRLIKNL 133
           LV LL R+  NL
Sbjct: 133 LVSLLLRIDANL 144


>Q7NEL8.1 Q7NEL8_GLOVI MarR family transcriptional regulatory protein
          Length = 158

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 79/132 (59%)

Query: 2   PTLLINRLSRALLKPVDDRLREVGISTSQLPVLVALKDGSKRTQKELAELAGVEQPSMAQ 61
           P  LI+  +R   +  + RL+ +G    QLPVLVAL+DG   +Q++LA  A +EQPSMAQ
Sbjct: 14  PGHLISLAARGFARLSEARLKPLGFGVGQLPVLVALQDGQAASQRDLARFARIEQPSMAQ 73

Query: 62  LLGRMERDNLIVREASPTDRRSSLVSLTEHAHQLLEPGRVVLREIDQDVCVVLSREEKEL 121
           +L RMERD LI R   P D RSS +SLTE A   L     VL + ++D     + EE   
Sbjct: 74  MLARMERDGLICRMPDPADGRSSRISLTETARTRLPDACAVLFQGNRDALNGFTDEEATQ 133

Query: 122 LVGLLQRLIKNL 133
           LV LL RLI NL
Sbjct: 134 LVVLLTRLIANL 145