BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0065.p         (210 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A9BXH1.1 A9BXH1_DELAS Binding-protein-dependent transport system...   353   1e-95
C5CV46.1 C5CV46_VARPS Binding-protein-dependent transport system...   350   1e-94
Q0K025.1 Q0K025_CUPNH ABC-type sulfonate transporter, permease c...   328   3e-88
Q1LL77.1 Q1LL77_RALME ABC nitrate/sulfonate/bicarbonate family t...   325   2e-87
Q1BN03.1 Q1BN03_BURCA Binding-protein-dependent transport system...   311   4e-83

>A9BXH1.1 A9BXH1_DELAS Binding-protein-dependent transport systems inner
           membrane component
          Length = 351

 Score =  353 bits (905), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 176/210 (83%), Positives = 193/210 (91%)

Query: 1   VYSEDWSRLGISTAYSLRLLVHGFAAGGLVGFLVGATIGWSRVAGYWVHPVLRFLGPVPA 60
           V  EDW RLG+ST YSLRLL++G   G ++GFL G  IGWSR+AGYWVHP+LRFLGPVPA
Sbjct: 142 VVHEDWQRLGLSTLYSLRLLLNGIVFGAVIGFLTGVWIGWSRIAGYWVHPLLRFLGPVPA 201

Query: 61  SALLPLAFFFAPSSYAAAVFLIALATAFPVAVLTWSGVASVNKSYYDVARTLGASEWFLI 120
           SALLPLAFFFAPSSY+AAVFL+ALAT FPVAVLTWSGVASV+KSYYDVARTLGAS WFL+
Sbjct: 202 SALLPLAFFFAPSSYSAAVFLVALATFFPVAVLTWSGVASVSKSYYDVARTLGASPWFLV 261

Query: 121 LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLGWYLQWSQGWAAYSNMYAALI 180
           LRVAIPAALPQVFVGLFMGLGA+FSVL+TAEMMGVKAGLGWYLQW+QGWAAY+NMY AL+
Sbjct: 262 LRVAIPAALPQVFVGLFMGLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYTALL 321

Query: 181 VMAILCSSLITLLFRVRDRALSWQKGTVKW 210
           VMA+LCS LITLLF VRDR LSWQKGTVKW
Sbjct: 322 VMAVLCSGLITLLFTVRDRTLSWQKGTVKW 351


>C5CV46.1 C5CV46_VARPS Binding-protein-dependent transport systems inner
           membrane component
          Length = 360

 Score =  350 bits (897), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 176/210 (83%), Positives = 189/210 (90%)

Query: 1   VYSEDWSRLGISTAYSLRLLVHGFAAGGLVGFLVGATIGWSRVAGYWVHPVLRFLGPVPA 60
            Y +DW RLG S  +S RLL HGF  G L GFL G TIGWSR+AGYWVHPVLRF+GPVPA
Sbjct: 151 TYIDDWRRLGESLLHSTRLLAHGFVLGALAGFLTGVTIGWSRIAGYWVHPVLRFVGPVPA 210

Query: 61  SALLPLAFFFAPSSYAAAVFLIALATAFPVAVLTWSGVASVNKSYYDVARTLGASEWFLI 120
           SALLPLAFFF PSSYAAAVFLIALAT FPVAVLTWSGVA VN++YYDVART+GASE FL+
Sbjct: 211 SALLPLAFFFFPSSYAAAVFLIALATGFPVAVLTWSGVAGVNRNYYDVARTMGASERFLV 270

Query: 121 LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLGWYLQWSQGWAAYSNMYAALI 180
           LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLG+YL W+QGWA+YSNMYAALI
Sbjct: 271 LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLGFYLSWAQGWASYSNMYAALI 330

Query: 181 VMAILCSSLITLLFRVRDRALSWQKGTVKW 210
           VMA+LCS LITLLF+VRDR LSWQKGTVKW
Sbjct: 331 VMAVLCSGLITLLFKVRDRVLSWQKGTVKW 360


>Q0K025.1 Q0K025_CUPNH ABC-type sulfonate transporter, permease component
          Length = 352

 Score =  328 bits (842), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/210 (80%), Positives = 185/210 (88%)

Query: 1   VYSEDWSRLGISTAYSLRLLVHGFAAGGLVGFLVGATIGWSRVAGYWVHPVLRFLGPVPA 60
           VY++DW RLG S   +LRLL  G A GGL GFLVG +IGWSR  GYWVHPVLR LGP+P+
Sbjct: 143 VYADDWRRLGDSALNTLRLLGLGVAYGGLAGFLVGVSIGWSRRIGYWVHPVLRVLGPLPS 202

Query: 61  SALLPLAFFFAPSSYAAAVFLIALATAFPVAVLTWSGVASVNKSYYDVARTLGASEWFLI 120
           +ALLPL F+F PSSY+AAVFLIALATAFPVAVLTWSGVA VNKSYYDVART+GAS WFL+
Sbjct: 203 TALLPLTFYFFPSSYSAAVFLIALATAFPVAVLTWSGVAGVNKSYYDVARTMGASGWFLV 262

Query: 121 LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLGWYLQWSQGWAAYSNMYAALI 180
           LRVAIPAALPQVFVGLFMGLGA+FSVLVTAEMMGVK+GLGWYL W+QGWA+Y NMYAALI
Sbjct: 263 LRVAIPAALPQVFVGLFMGLGASFSVLVTAEMMGVKSGLGWYLTWAQGWASYVNMYAALI 322

Query: 181 VMAILCSSLITLLFRVRDRALSWQKGTVKW 210
           VMA+L S +ITLLF  RDR LSWQKGTVKW
Sbjct: 323 VMALLFSGVITLLFVARDRVLSWQKGTVKW 352


>Q1LL77.1 Q1LL77_RALME ABC nitrate/sulfonate/bicarbonate family transporter,
           inner membrane subunit
          Length = 347

 Score =  325 bits (833), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 165/210 (78%), Positives = 184/210 (87%)

Query: 1   VYSEDWSRLGISTAYSLRLLVHGFAAGGLVGFLVGATIGWSRVAGYWVHPVLRFLGPVPA 60
           VY +DW RLG S   +L+LL  G   G L GFL+G +IGWSR  GYW+HPVLR LGP+P+
Sbjct: 138 VYLDDWQRLGDSAFNTLKLLGLGVGYGALAGFLIGVSIGWSRRIGYWIHPVLRVLGPLPS 197

Query: 61  SALLPLAFFFAPSSYAAAVFLIALATAFPVAVLTWSGVASVNKSYYDVARTLGASEWFLI 120
           +ALLPL F+F PSSY+AAVFLIALATAFPVAVLTWSGVA VNKSYYDVART+GAS WFL+
Sbjct: 198 TALLPLTFYFFPSSYSAAVFLIALATAFPVAVLTWSGVAGVNKSYYDVARTMGASGWFLV 257

Query: 121 LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLGWYLQWSQGWAAYSNMYAALI 180
           LRVAIPAALPQVFVGLFMGLGA+FSVLVTAEMMGVK+GLGWYL W+QGWA+Y NMYAALI
Sbjct: 258 LRVAIPAALPQVFVGLFMGLGASFSVLVTAEMMGVKSGLGWYLTWAQGWASYVNMYAALI 317

Query: 181 VMAILCSSLITLLFRVRDRALSWQKGTVKW 210
           VMA+L S +ITLLF VRDRALSWQKGTVKW
Sbjct: 318 VMALLFSGVITLLFAVRDRALSWQKGTVKW 347


>Q1BN03.1 Q1BN03_BURCA Binding-protein-dependent transport systems inner
           membrane component
          Length = 365

 Score =  311 bits (797), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 160/210 (76%), Positives = 177/210 (84%)

Query: 1   VYSEDWSRLGISTAYSLRLLVHGFAAGGLVGFLVGATIGWSRVAGYWVHPVLRFLGPVPA 60
           VY +DW RL  S A +L+LL  GFA G  VGF VG +IGWSR  GYWVHPVLR LGPVPA
Sbjct: 156 VYVDDWPRLAGSAANTLKLLALGFAYGVTVGFAVGVSIGWSRRIGYWVHPVLRVLGPVPA 215

Query: 61  SALLPLAFFFAPSSYAAAVFLIALATAFPVAVLTWSGVASVNKSYYDVARTLGASEWFLI 120
           +ALLPL F+F PSSY+AA FLIALAT FPVAVLTWSGVASVNK YYDVARTLGA+  FL+
Sbjct: 216 TALLPLTFYFFPSSYSAAAFLIALATGFPVAVLTWSGVASVNKQYYDVARTLGANARFLV 275

Query: 121 LRVAIPAALPQVFVGLFMGLGAAFSVLVTAEMMGVKAGLGWYLQWSQGWAAYSNMYAALI 180
           LRVAIPAALP VFVG+FMGL A+F+VLV AEMMGVK+GLGWYL W+QGWA+Y NMYAALI
Sbjct: 276 LRVAIPAALPHVFVGIFMGLSASFTVLVVAEMMGVKSGLGWYLSWAQGWASYVNMYAALI 335

Query: 181 VMAILCSSLITLLFRVRDRALSWQKGTVKW 210
           VMA+L S LI LLF VRDR L+WQKGTVKW
Sbjct: 336 VMALLFSGLIALLFAVRDRVLAWQKGTVKW 365