BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0038.p         (186 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J181.1 D8J181_HERSS ABC-type antimicrobial peptide transport s...   198   3e-49
C7RNE0.1 C7RNE0_ACCPU ABC transporter related                         189   2e-46
E3BGD5.1 E3BGD5_9VIBR ABC transporter, ATP-binding protein            188   3e-46
D2YEL5.1 D2YEL5_VIBMI ABC transporter, ATP-binding protein            182   2e-44
D2YST5.1 D2YST5_VIBMI ABC transporter, ATP-binding protein            182   3e-44

>D8J181.1 D8J181_HERSS ABC-type antimicrobial peptide transport system,
           ATPase component protein
          Length = 245

 Score =  198 bits (504), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/161 (69%), Positives = 130/161 (80%)

Query: 4   AAIALRDITFTWPGQKTPTLALDRFEVQAREQVFVSGPSGSGKSTLLALIGGISSAQAGS 63
           AAI LRD+ FTW GQ  P LAL    + A E VF+SGPSGSGKSTLLA IGGI   Q GS
Sbjct: 11  AAIDLRDLQFTWAGQPHPALALTSLRIAAGEHVFISGPSGSGKSTLLAAIGGIILPQHGS 70

Query: 64  VAILGQPLEALPASRRDRFRVDHIGFIFQQFNLIPYLSILDNVLLPCRFSSLRRERALAQ 123
           V +LG+ L  LPA +RDRFRVDH+GFIFQQFNL+PYLSILDNVLLPC+FS+ R++RAL Q
Sbjct: 71  VEVLGKRLHTLPAPQRDRFRVDHLGFIFQQFNLLPYLSILDNVLLPCQFSAYRKQRALQQ 130

Query: 124 GSDLRAAAESLLRSLDMAPDLWTRAATQLSIGQQQRVAAAR 164
           G++L AAA++LL +LD+AP LW R  TQLSIGQQQRVAAAR
Sbjct: 131 GANLTAAAQALLAALDLAPSLWQRPVTQLSIGQQQRVAAAR 171


>C7RNE0.1 C7RNE0_ACCPU ABC transporter related
          Length = 240

 Score =  189 bits (480), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/163 (56%), Positives = 117/163 (71%)

Query: 2   SDAAIALRDITFTWPGQKTPTLALDRFEVQAREQVFVSGPSGSGKSTLLALIGGISSAQA 61
           S+  +A+ D+ F WP Q    L L    ++  E  F+ GPSG GKSTLL+LIGG+    +
Sbjct: 3   SETVVAITDLVFRWPRQSAVCLDLPELRLRRGEHAFLHGPSGCGKSTLLSLIGGVLVPGS 62

Query: 62  GSVAILGQPLEALPASRRDRFRVDHIGFIFQQFNLIPYLSILDNVLLPCRFSSLRRERAL 121
           GS+ +LG+ L  L +++RDR R DHIGF+FQQFNL+PYL ++DNVLLPCRFS+ RRE+A 
Sbjct: 63  GSIDLLGEDLGRLRSTQRDRLRADHIGFVFQQFNLVPYLPVIDNVLLPCRFSARRREQAQ 122

Query: 122 AQGSDLRAAAESLLRSLDMAPDLWTRAATQLSIGQQQRVAAAR 164
           A G+ LR  AE LL  LD+A DLW R AT LS+GQQQRVAAAR
Sbjct: 123 AGGASLRGEAERLLSHLDLARDLWLRPATDLSVGQQQRVAAAR 165


>E3BGD5.1 E3BGD5_9VIBR ABC transporter, ATP-binding protein
          Length = 234

 Score =  188 bits (478), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/161 (54%), Positives = 120/161 (74%), Gaps = 3/161 (1%)

Query: 4   AAIALRDITFTWPGQKTPTLALDRFEVQAREQVFVSGPSGSGKSTLLALIGGISSAQAGS 63
             ++L ++ FTWPG ++PT+ +    ++  E +F+ GPSG GKSTLL L+ GI+SA +G+
Sbjct: 8   CVVSLDNVIFTWPGNESPTIDIPSLTIKRGEHLFIKGPSGCGKSTLLGLLTGINSATSGN 67

Query: 64  VAILGQPLEALPASRRDRFRVDHIGFIFQQFNLIPYLSILDNVLLPCRFSSLRRERALAQ 123
           V+ILGQ L  L A+RRD+FR D+IG+IFQQFNL+PYLS+++NV LPCRFSSLRR+++   
Sbjct: 68  VSILGQELSKLTATRRDKFRADNIGYIFQQFNLLPYLSVIENVTLPCRFSSLRRQQS--- 124

Query: 124 GSDLRAAAESLLRSLDMAPDLWTRAATQLSIGQQQRVAAAR 164
            +DL   A+ LL  L ++P L  R   +LSIGQQQRVAAAR
Sbjct: 125 ENDLNQQAKELLSRLHISPHLLGRPVVELSIGQQQRVAAAR 165


>D2YEL5.1 D2YEL5_VIBMI ABC transporter, ATP-binding protein
          Length = 239

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 116/166 (69%), Gaps = 6/166 (3%)

Query: 2   SDAA---IALRDITFTWPGQKTPTLALDRFEVQAREQVFVSGPSGSGKSTLLALIGGISS 58
           SD+A   I L D  F WPG  TPTL +   +V   E +F+ GPSG GKSTLL+L+ GI++
Sbjct: 7   SDSASFVIELNDAVFCWPGASTPTLDIAHLQVAQGEHLFIKGPSGCGKSTLLSLLTGINT 66

Query: 59  AQAGSVAILGQPLEALPASRRDRFRVDHIGFIFQQFNLIPYLSILDNVLLPCRFSSLRRE 118
           A  G V++LG  L AL AS+RDRFR DHIG+IFQQFNL+PYLS+LDNV LPC FS+LR++
Sbjct: 67  ATQGVVSLLGSDLRALSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQ 126

Query: 119 RALAQGSDLRAAAESLLRSLDMAPDLWTRAATQLSIGQQQRVAAAR 164
           +       L+  A+SLL  L +   L  +  T+LSIGQQQRVAAAR
Sbjct: 127 QV---SGSLQQKAQSLLERLHLPSTLLNKPVTELSIGQQQRVAAAR 169


>D2YST5.1 D2YST5_VIBMI ABC transporter, ATP-binding protein
          Length = 239

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 115/166 (69%), Gaps = 6/166 (3%)

Query: 2   SDAA---IALRDITFTWPGQKTPTLALDRFEVQAREQVFVSGPSGSGKSTLLALIGGISS 58
           SD+A   I L D  F WPG  TPTL +   +V   E +F+ GPSG GKSTLL+L+ GI++
Sbjct: 7   SDSASYVIELNDAVFCWPGASTPTLDIAHLQVAQGEHLFIKGPSGCGKSTLLSLLTGINT 66

Query: 59  AQAGSVAILGQPLEALPASRRDRFRVDHIGFIFQQFNLIPYLSILDNVLLPCRFSSLRRE 118
           A  G V++LG  L AL AS+RDRFR DHIG+IFQQFNL+PYLS+LDNV LPC FS+LR++
Sbjct: 67  ATQGVVSLLGSDLRALSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQ 126

Query: 119 RALAQGSDLRAAAESLLRSLDMAPDLWTRAATQLSIGQQQRVAAAR 164
                   L+  A+SLL  L +   L  +  T+LSIGQQQRVAAAR
Sbjct: 127 HV---SGSLQQKAQSLLERLHLPNALLNKPVTELSIGQQQRVAAAR 169