BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0018.p         (125 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G7Y7.1 EX7L_HERAR Exodeoxyribonuclease 7 large subunit EC=3.1....   154   4e-36
D8J1R2.1 D8J1R2_HERSS Exodeoxyribonuclease 7 large subunit EC=3....   153   7e-36
F1W1P3.1 F1W1P3_9BURK Exodeoxyribonuclease VII large subunit          153   1e-35
A6T178.1 EX7L_JANMA Exodeoxyribonuclease 7 large subunit EC=3.1....   149   1e-34
Q2T0K0.1 Q2T0K0_BURTA Exodeoxyribonuclease 7 large subunit EC=3....   144   4e-33

>A4G7Y7.1 EX7L_HERAR Exodeoxyribonuclease 7 large subunit EC=3.1.11.6
          Length = 453

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 72/94 (76%), Positives = 82/94 (87%), Gaps = 1/94 (1%)

Query: 9   PTPSAPPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQ 68
           P P+  P+   VL VSALNQAV+R+LER+FPL W++GEISNFTRAASGHWYFTLKDDAAQ
Sbjct: 6   PNPNQTPTSN-VLTVSALNQAVSRMLERSFPLTWIAGEISNFTRAASGHWYFTLKDDAAQ 64

Query: 69  VRAVMFKGRAQHAGFSPREGDKVEVRTLVTLYAP 102
           VRAVMF+GRAQ+  F PREGD+VEVR LVTLYAP
Sbjct: 65  VRAVMFRGRAQYTDFMPREGDRVEVRALVTLYAP 98


>D8J1R2.1 D8J1R2_HERSS Exodeoxyribonuclease 7 large subunit EC=3.1.11.6
          Length = 438

 Score =  153 bits (387), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 70/83 (84%), Positives = 76/83 (91%)

Query: 20  VLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQVRAVMFKGRAQ 79
           +L VSALNQAV R+LER FPL+WV GE+SNFTRAASGHWYF LKD+ AQVRAVMFKGRAQ
Sbjct: 1   MLTVSALNQAVGRMLERNFPLLWVKGEVSNFTRAASGHWYFNLKDEGAQVRAVMFKGRAQ 60

Query: 80  HAGFSPREGDKVEVRTLVTLYAP 102
           +AGF PREGDKVEVRTLVTLYAP
Sbjct: 61  YAGFMPREGDKVEVRTLVTLYAP 83


>F1W1P3.1 F1W1P3_9BURK Exodeoxyribonuclease VII large subunit
          Length = 454

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/88 (79%), Positives = 81/88 (92%)

Query: 14  PPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQVRAVM 73
           P +  PVL VSALNQAV+R+LER FPL+WV+GE+SNFTRAASGHWYF+LKD +AQVRAVM
Sbjct: 10  PDTASPVLTVSALNQAVSRMLERNFPLMWVAGEVSNFTRAASGHWYFSLKDASAQVRAVM 69

Query: 74  FKGRAQHAGFSPREGDKVEVRTLVTLYA 101
           F+GRAQ+AGF P+EGDKVEVRTLVTLYA
Sbjct: 70  FRGRAQYAGFIPKEGDKVEVRTLVTLYA 97


>A6T178.1 EX7L_JANMA Exodeoxyribonuclease 7 large subunit EC=3.1.11.6
          Length = 453

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/83 (85%), Positives = 76/83 (91%)

Query: 20  VLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQVRAVMFKGRAQ 79
           VL+VSALNQAV+R+LER FPL WVSGEISNFT AASGHWYFTLKD AAQVRAVMF+GRAQ
Sbjct: 16  VLSVSALNQAVSRMLERNFPLSWVSGEISNFTCAASGHWYFTLKDSAAQVRAVMFRGRAQ 75

Query: 80  HAGFSPREGDKVEVRTLVTLYAP 102
           +A F PREGDKVEVR LVTLYAP
Sbjct: 76  YADFMPREGDKVEVRALVTLYAP 98


>Q2T0K0.1 Q2T0K0_BURTA Exodeoxyribonuclease 7 large subunit EC=3.1.11.6
          Length = 561

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 87/114 (76%), Gaps = 1/114 (0%)

Query: 3   HDDFSSPTPSAPPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTL 62
           H + +       P+G  V+ VSALN+A+  +LERTFPL+WV+GE+SNFTRAASGHWYF++
Sbjct: 103 HSETTFAGSGGAPAGDGVIPVSALNRAIGTMLERTFPLLWVAGEVSNFTRAASGHWYFSI 162

Query: 63  KDDAAQVRAVMFKGRAQHAGFSPREGDKVEVRTLVTLYAPXKVEVRTLVTLSRR 116
           KD  AQ+R VMF+GRAQHA F+PREGDK+EVR LVT+Y P + EV+  V   RR
Sbjct: 163 KDQQAQMRCVMFRGRAQHAEFTPREGDKIEVRALVTMYEP-RGEVQLNVEAVRR 215