BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0009.p (273 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4UQR5.1 A4UQR5_9RHIZ ChrB 317 9e-85 D6CID6.1 D6CID6_9PSED TnOtChr-like ChrB regulatory protein 317 9e-85 D3VX11.1 D3VX11_COMTE TnOtChr-like ChrB regulatory protein 317 9e-85 C9YAK6.1 C9YAK6_9BURK Protein chrB 291 5e-77 B0KJP6.1 B0KJP6_PSEPG Putative uncharacterized protein 288 8e-76 >A4UQR5.1 A4UQR5_9RHIZ ChrB Length = 312 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 152/266 (57%), Positives = 189/266 (71%) Query: 1 MPDLDECRHTLEGISAEVISCGGNAFVLRVEEPMATDFSELFKRDEDYATLLSDVAKARA 60 MPD DECR L+ ++++V GG A VLR+E+P +F LF R D+A LL DV R Sbjct: 40 MPDRDECRAVLDNLASDVREGGGVAHVLRMEDPEGVNFVALFDRSNDFAALLVDVHHLRQ 99 Query: 61 TLTAGTLPKATKEIRKLRKQLIDLSVIDFFPGPAQQQVDAAINELELALAHASSPDEPMP 120 TLT T+ +++RKLRK L IDF+PG AQ+Q D+A+ ELE A A SPDEP Sbjct: 100 TLTLDTVQDVLRQVRKLRKSFTTLVEIDFYPGEAQRQADSALCELEQACARTLSPDEPHA 159 Query: 121 AEGRIPERERDRFQGKTWATRRRPWVDRLASAWLIRRFIDPHAVILWLESPDDCPADAIG 180 EG I +R +Q +TWATR RPWVDRLASAWLIRRFIDP A ILWL +P DCP DA+G Sbjct: 160 VEGTITRLDRLDYQARTWATRARPWVDRLASAWLIRRFIDPQARILWLATPADCPPDALG 219 Query: 181 FDFDGASISHMGSYVTFEVFVMSFGLQQAGLKRLAALIHYLDAGGVQPPESIGIESILAG 240 FDFDGA+ SH+GS VTFEV SFGL+Q + R+ ++HYLD GG+QPPE+ GIES+LAG Sbjct: 220 FDFDGATFSHVGSRVTFEVLAASFGLEQPAITRIGLVVHYLDVGGIQPPEATGIESVLAG 279 Query: 241 MKNTIADDDQLLIAATGIFDGLLASF 266 ++ T+ DDQLL A+ +FDGLLASF Sbjct: 280 LRETVDHDDQLLAIASTVFDGLLASF 305 >D6CID6.1 D6CID6_9PSED TnOtChr-like ChrB regulatory protein Length = 312 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 152/266 (57%), Positives = 189/266 (71%) Query: 1 MPDLDECRHTLEGISAEVISCGGNAFVLRVEEPMATDFSELFKRDEDYATLLSDVAKARA 60 MPD DECR L+ ++++V GG A VLR+E+P +F LF R D+A LL DV R Sbjct: 40 MPDRDECRAVLDNLASDVREGGGVAHVLRMEDPEGVNFVALFDRSNDFAALLVDVHHLRQ 99 Query: 61 TLTAGTLPKATKEIRKLRKQLIDLSVIDFFPGPAQQQVDAAINELELALAHASSPDEPMP 120 TLT T+ +++RKLRK L IDF+PG AQ+Q D+A+ ELE A A SPDEP Sbjct: 100 TLTLDTVQDVLRQVRKLRKSFTTLVEIDFYPGEAQRQADSALCELEQACARTLSPDEPHA 159 Query: 121 AEGRIPERERDRFQGKTWATRRRPWVDRLASAWLIRRFIDPHAVILWLESPDDCPADAIG 180 EG I +R +Q +TWATR RPWVDRLASAWLIRRFIDP A ILWL +P DCP DA+G Sbjct: 160 VEGTITRLDRLDYQARTWATRARPWVDRLASAWLIRRFIDPQARILWLATPADCPPDALG 219 Query: 181 FDFDGASISHMGSYVTFEVFVMSFGLQQAGLKRLAALIHYLDAGGVQPPESIGIESILAG 240 FDFDGA+ SH+GS VTFEV SFGL+Q + R+ ++HYLD GG+QPPE+ GIES+LAG Sbjct: 220 FDFDGATFSHVGSRVTFEVLAASFGLEQPAITRIGLVVHYLDVGGIQPPEATGIESVLAG 279 Query: 241 MKNTIADDDQLLIAATGIFDGLLASF 266 ++ T+ DDQLL A+ +FDGLLASF Sbjct: 280 LRETVDHDDQLLAIASTVFDGLLASF 305 >D3VX11.1 D3VX11_COMTE TnOtChr-like ChrB regulatory protein Length = 312 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 152/266 (57%), Positives = 189/266 (71%) Query: 1 MPDLDECRHTLEGISAEVISCGGNAFVLRVEEPMATDFSELFKRDEDYATLLSDVAKARA 60 MPD DECR L+ ++++V GG A VLR+E+P +F LF R D+A LL DV R Sbjct: 40 MPDRDECRAVLDNLASDVREGGGVAHVLRMEDPEGVNFVALFDRSNDFAALLVDVHHLRQ 99 Query: 61 TLTAGTLPKATKEIRKLRKQLIDLSVIDFFPGPAQQQVDAAINELELALAHASSPDEPMP 120 TLT T+ +++RKLRK L IDF+PG AQ+Q D+A+ ELE A A SPDEP Sbjct: 100 TLTLDTVQDVLRQVRKLRKSFTTLVEIDFYPGEAQRQADSALCELEQACARTLSPDEPHA 159 Query: 121 AEGRIPERERDRFQGKTWATRRRPWVDRLASAWLIRRFIDPHAVILWLESPDDCPADAIG 180 EG I +R +Q +TWATR RPWVDRLASAWLIRRFIDP A ILWL +P DCP DA+G Sbjct: 160 VEGTITRLDRLDYQARTWATRARPWVDRLASAWLIRRFIDPQARILWLATPADCPPDALG 219 Query: 181 FDFDGASISHMGSYVTFEVFVMSFGLQQAGLKRLAALIHYLDAGGVQPPESIGIESILAG 240 FDFDGA+ SH+GS VTFEV SFGL+Q + R+ ++HYLD GG+QPPE+ GIES+LAG Sbjct: 220 FDFDGATFSHVGSRVTFEVLAASFGLEQPAITRIGLVVHYLDVGGIQPPEATGIESVLAG 279 Query: 241 MKNTIADDDQLLIAATGIFDGLLASF 266 ++ T+ DDQLL A+ +FDGLLASF Sbjct: 280 LRETVDHDDQLLAIASTVFDGLLASF 305 >C9YAK6.1 C9YAK6_9BURK Protein chrB Length = 319 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 140/269 (52%), Positives = 181/269 (67%) Query: 1 MPDLDECRHTLEGISAEVISCGGNAFVLRVEEPMATDFSELFKRDEDYATLLSDVAKARA 60 MP+ + CR LEG+++EV++ GG A+V+ P TDF+ LF R ++A L+ D+ K + Sbjct: 44 MPEREACRQVLEGVASEVVASGGMAYVMTTVGPQNTDFTFLFDRSSEFAALVQDIKKMHS 103 Query: 61 TLTAGTLPKATKEIRKLRKQLIDLSVIDFFPGPAQQQVDAAINELELALAHASSPDEPMP 120 +L+ + +K+ RKLRK L IDFF A++Q +AA+ ELE +A SPDEP Sbjct: 104 SLSDDSANDVSKQTRKLRKAFAALVEIDFFGSEAKKQTEAALLELEADVARILSPDEPHA 163 Query: 121 AEGRIPERERDRFQGKTWATRRRPWVDRLASAWLIRRFIDPHAVILWLESPDDCPADAIG 180 G I R + GKTWATR RPWVDRLA AWLIRR IDP A ILWL SP DCP A+ Sbjct: 164 TIGAIATLNRAEYIGKTWATRARPWVDRLACAWLIRRHIDPQAKILWLASPKDCPKKALS 223 Query: 181 FDFDGASISHMGSYVTFEVFVMSFGLQQAGLKRLAALIHYLDAGGVQPPESIGIESILAG 240 FDFDGA+ SH G+ V+FEV + SF L L++L L+HYLD GG+QPPE+ GIES+LAG Sbjct: 224 FDFDGATFSHTGAKVSFEVMLASFSLNTPALQQLGHLVHYLDVGGLQPPEASGIESVLAG 283 Query: 241 MKNTIADDDQLLIAATGIFDGLLASFATE 269 M+ I DDDQLL AA +FDGLL +F+ E Sbjct: 284 MREAITDDDQLLHAACAVFDGLLHTFSKE 312 >B0KJP6.1 B0KJP6_PSEPG Putative uncharacterized protein Length = 313 Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 140/269 (52%), Positives = 185/269 (68%), Gaps = 1/269 (0%) Query: 1 MPDLDECRHTLEGISAEVISCGGNAFVLRVEEPMATDFSELFKRDEDYATLLSDVAKARA 60 +P+ R TLE + +V++ G AF+L + E FS LF R ++YA LL ++A RA Sbjct: 41 LPEQCAGRETLEAVERDVLAINGTAFLLSLPE-REERFSGLFDRSDEYAKLLEEIASCRA 99 Query: 61 TLTAGTLPKATKEIRKLRKQLIDLSVIDFFPGPAQQQVDAAINELELALAHASSPDEPMP 120 L+ +A +++RKLRK L+ IDFFPG ++ D+A+ ELE A++ A S DEP Sbjct: 100 DLSPDNALQAARQVRKLRKAFGQLAAIDFFPGVLKKHADSALQELETAISRALSSDEPSA 159 Query: 121 AEGRIPERERDRFQGKTWATRRRPWVDRLASAWLIRRFIDPHAVILWLESPDDCPADAIG 180 + I + ER +QG+ WATR+RPWVDRLA AWLIRRFID A +WL+SP DCP+DA+G Sbjct: 160 HDEAINQLERSEYQGRRWATRKRPWVDRLACAWLIRRFIDADAQFIWLDSPSDCPSDALG 219 Query: 181 FDFDGASISHMGSYVTFEVFVMSFGLQQAGLKRLAALIHYLDAGGVQPPESIGIESILAG 240 FDFDGA SH+G V+FE + SF +QQ GL RLA +IHYLD GGVQP E+ GIE +LAG Sbjct: 220 FDFDGARFSHVGQRVSFETLIESFCVQQPGLARLAGVIHYLDVGGVQPSEAPGIERVLAG 279 Query: 241 MKNTIADDDQLLIAATGIFDGLLASFATE 269 ++ +I DDDQL A GIFDGLL +FA+E Sbjct: 280 LRESIGDDDQLTTVAGGIFDGLLTAFASE 308