BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0122.p (381 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B5WMP9.1 B5WMP9_9BURK Major facilitator superfamily MFS_1 346 3e-93 D5W9N6.1 D5W9N6_BURSC Major facilitator superfamily MFS_1 342 4e-92 Q13WC6.1 Q13WC6_BURXL Major facilitator superfamily (MFS) multid... 342 6e-92 D5NCV5.1 D5NCV5_9BURK Major facilitator superfamily MFS_1 341 1e-91 B9C883.1 B9C883_9BURK Fosmidomycin resistance protein 337 2e-90 >B5WMP9.1 B5WMP9_9BURK Major facilitator superfamily MFS_1 Length = 420 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 174/228 (76%), Positives = 197/228 (86%), Gaps = 3/228 (1%) Query: 113 LITLTFQVTASLLQPLVGLYTDKHPKPYSLAIGMGSTLCGLLLLSVAPNFGILLVAAALV 172 LITLT+Q+TASLLQPLVG YTDKHPKPYSL +GMG TL GLLL+SVAPNF +LLVAAALV Sbjct: 76 LITLTYQITASLLQPLVGSYTDKHPKPYSLPVGMGFTLAGLLLMSVAPNFSVLLVAAALV 135 Query: 173 GTGSSVFHPEASRVARMASGGRHGLAQSLFQVGGNAGSAMGPLLAAWIIIPGGQHSIAWF 232 G GSSVFHPE+SRVARMASGGRHGLAQSLFQVGGNAGS++GPLLAA I+IP GQ SIAWF Sbjct: 136 GCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSSLGPLLAALIVIPHGQRSIAWF 195 Query: 233 TIAALIAIVVLRQIGHWYQRQQLAGKTKQKKKAHGFVELPRNKVIMAVSILLLLIFSKYF 292 + AAL+AIVVL QIG WY+R K+ + G V LPRNKV+MA+S+L+LL+FSKYF Sbjct: 196 SAAALVAIVVLTQIGRWYKRHP---SVKKARGQGGHVALPRNKVVMAMSVLVLLVFSKYF 252 Query: 293 YMASLSSYFTFYLISKFQLSVQDAQIHLFVFLFAVAIGTVAGGPIGDK 340 Y+AS++SYFTFYLI KF LSVQ AQIHLFVFL AVA GTV GGPIGD+ Sbjct: 253 YLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTVIGGPIGDR 300 >D5W9N6.1 D5W9N6_BURSC Major facilitator superfamily MFS_1 Length = 421 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 174/228 (76%), Positives = 197/228 (86%), Gaps = 3/228 (1%) Query: 113 LITLTFQVTASLLQPLVGLYTDKHPKPYSLAIGMGSTLCGLLLLSVAPNFGILLVAAALV 172 LITLT+Q+TASLLQPLVG YTDKHPKPYSL +GMG TL GLLL+SVAPNF +LLVAAALV Sbjct: 77 LITLTYQITASLLQPLVGSYTDKHPKPYSLPVGMGFTLAGLLLMSVAPNFSVLLVAAALV 136 Query: 173 GTGSSVFHPEASRVARMASGGRHGLAQSLFQVGGNAGSAMGPLLAAWIIIPGGQHSIAWF 232 G GSSVFHPE+SRVARMASGGRHGLAQSLFQVGGNAGS++GPLLAA I+IP GQ SIAWF Sbjct: 137 GCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSSLGPLLAALIVIPHGQRSIAWF 196 Query: 233 TIAALIAIVVLRQIGHWYQRQQLAGKTKQKKKAHGFVELPRNKVIMAVSILLLLIFSKYF 292 + AAL+AIVVL QIG WY+R + K + AH LPRNK+I+A+S+L+LL+FSKYF Sbjct: 197 SAAALVAIVVLTQIGRWYKRHP-SVKKARGHAAHA--ALPRNKIILAMSVLVLLVFSKYF 253 Query: 293 YMASLSSYFTFYLISKFQLSVQDAQIHLFVFLFAVAIGTVAGGPIGDK 340 Y+ASL+SYFTFYLI KF LSVQ AQIHLF+FL AVA GTV GGPIGDK Sbjct: 254 YLASLNSYFTFYLIDKFHLSVQAAQIHLFMFLAAVAAGTVIGGPIGDK 301 >Q13WC6.1 Q13WC6_BURXL Major facilitator superfamily (MFS) multidrug (Fosmidomycin) efflux pump Length = 420 Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 169/228 (74%), Positives = 196/228 (85%), Gaps = 3/228 (1%) Query: 113 LITLTFQVTASLLQPLVGLYTDKHPKPYSLAIGMGSTLCGLLLLSVAPNFGILLVAAALV 172 LITLT+Q+TASLLQPLVG+YTDKHPKPYSL +GMG TL GLLL+SVAPNFG+LLVAAALV Sbjct: 76 LITLTYQITASLLQPLVGIYTDKHPKPYSLPVGMGFTLAGLLLMSVAPNFGVLLVAAALV 135 Query: 173 GTGSSVFHPEASRVARMASGGRHGLAQSLFQVGGNAGSAMGPLLAAWIIIPGGQHSIAWF 232 G GSSVFHPE+SRVARMASGGRHGLAQSLFQVGGNAGS++GPLLAA I+IP GQ SIAWF Sbjct: 136 GCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSSLGPLLAALIVIPHGQRSIAWF 195 Query: 233 TIAALIAIVVLRQIGHWYQRQQLAGKTKQKKKAHGFVELPRNKVIMAVSILLLLIFSKYF 292 ++AAL+A+VVL QIG WY+R K+ + A G L RNKV+ A+ +L+LL+FSKYF Sbjct: 196 SVAALVAMVVLTQIGRWYKRHP---SVKKARSAAGHATLSRNKVMFAMGVLILLVFSKYF 252 Query: 293 YMASLSSYFTFYLISKFQLSVQDAQIHLFVFLFAVAIGTVAGGPIGDK 340 Y+AS++SYFTFYLI KF L VQ AQ+HLFVFL AVA GTV GGPIGD+ Sbjct: 253 YLASINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPIGDR 300 >D5NCV5.1 D5NCV5_9BURK Major facilitator superfamily MFS_1 Length = 418 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 169/228 (74%), Positives = 196/228 (85%), Gaps = 3/228 (1%) Query: 113 LITLTFQVTASLLQPLVGLYTDKHPKPYSLAIGMGSTLCGLLLLSVAPNFGILLVAAALV 172 LITLT+Q+TASLLQPLVG+YTDKHPKPYSL +GMG TL GLLL+SVAPNFG+LLVAAALV Sbjct: 74 LITLTYQITASLLQPLVGIYTDKHPKPYSLPVGMGFTLAGLLLMSVAPNFGVLLVAAALV 133 Query: 173 GTGSSVFHPEASRVARMASGGRHGLAQSLFQVGGNAGSAMGPLLAAWIIIPGGQHSIAWF 232 G GSSVFHPE+SRVARMASGGRHGLAQSLFQVGGNAGS++GPLLAA I+IP GQ SIAWF Sbjct: 134 GCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSSLGPLLAALIVIPHGQRSIAWF 193 Query: 233 TIAALIAIVVLRQIGHWYQRQQLAGKTKQKKKAHGFVELPRNKVIMAVSILLLLIFSKYF 292 ++AAL+AIVVL QIG WY++ K+ + A G L RNKV+ A+ +L+LL+FSKYF Sbjct: 194 SVAALVAIVVLTQIGRWYKQHP---SVKKARSAAGHATLSRNKVMFAMGVLILLVFSKYF 250 Query: 293 YMASLSSYFTFYLISKFQLSVQDAQIHLFVFLFAVAIGTVAGGPIGDK 340 Y+AS++SYFTFYLI KF L VQ AQ+HLFVFL AVA GTV GGPIGD+ Sbjct: 251 YLASINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPIGDR 298 >B9C883.1 B9C883_9BURK Fosmidomycin resistance protein Length = 413 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 171/236 (72%), Positives = 199/236 (84%), Gaps = 3/236 (1%) Query: 105 AAAAAKFXLITLTFQVTASLLQPLVGLYTDKHPKPYSLAIGMGSTLCGLLLLSVAPNFGI 164 A + A+ LITLT+Q+TASLLQPLVGLYTDK PKPYSL +GMG TL GLLL+SVAPNF + Sbjct: 60 ALSFAQIGLITLTYQITASLLQPLVGLYTDKRPKPYSLPVGMGFTLSGLLLMSVAPNFPM 119 Query: 165 LLVAAALVGTGSSVFHPEASRVARMASGGRHGLAQSLFQVGGNAGSAMGPLLAAWIIIPG 224 LLVAAALVG GSSVFHPE+SRVARMASGGRHGLAQSLFQVGGNAGSA+GPLLAA +IIP Sbjct: 120 LLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSALGPLLAALVIIPH 179 Query: 225 GQHSIAWFTIAALIAIVVLRQIGHWYQRQQLAGKTKQKKKAHGFVELPRNKVIMAVSILL 284 GQHSIAWF+ AAL+A+VVL QIGHWY++ K+K A G L R +V+ A+ +L+ Sbjct: 180 GQHSIAWFSAAALVAMVVLTQIGHWYKKHP---SMKKKAAAAGHPTLSRGRVLGAIGVLV 236 Query: 285 LLIFSKYFYMASLSSYFTFYLISKFQLSVQDAQIHLFVFLFAVAIGTVAGGPIGDK 340 LL+FSKYFY+AS++SYFTFYLI KF LSVQ AQIHLFVFL AVA GT+ GGP+GD+ Sbjct: 237 LLVFSKYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTLIGGPVGDR 292