BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0113.p (408 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQR6.1 D8IQR6_HERSS ABC-type branched-chain amino acid transpo... 707 0.0 Q0K8G5.1 Q0K8G5_CUPNH ABC-type transporter, permease component: ... 668 0.0 B3R126.1 B3R126_CUPTR High-affinity branched-chain amino acid tr... 658 0.0 Q2T468.1 Q2T468_BURTA High-affinity branched-chain amino acid tr... 656 0.0 Q3JGL2.1 Q3JGL2_BURP1 High-affinity branched-chain amino acid tr... 647 0.0 >D8IQR6.1 D8IQR6_HERSS ABC-type branched-chain amino acid transport system, permease component protein Length = 408 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/408 (85%), Positives = 380/408 (93%) Query: 1 MPITLKNAVAAAILTAILTTPMLGLQLQLEGYRVVLNAHWTPVLIAVLVVFVFQLIKPAL 60 MP T KNAV AA++TA+LT P+LG+QLQLEGYRVVLN HWTPVL+AVL VF+FQL KP L Sbjct: 1 MPETFKNAVTAALVTAVLTIPLLGMQLQLEGYRVVLNTHWTPVLVAVLAVFLFQLAKPVL 60 Query: 61 TRSTRKIRLPALPQLQPRQQRYALLFLFAIALVWPFFGSRGNVDVVTLALIYVILGLGLN 120 +RS+ I+LPALP++QPRQQR A++ L ALVWPFFGSRG VDV+TLALIYV+LGLGLN Sbjct: 61 SRSSAGIKLPALPRMQPRQQRAAVMILLMAALVWPFFGSRGYVDVMTLALIYVVLGLGLN 120 Query: 121 IVVGFAGLLDLGYVGFYAVGGYTYALLNQYFGFTFWECLPIAAGMSALFGFILGFPVLRL 180 IVVGFAGLLDLGYVGFYAVG YTYAL NQYFG TFWEC+P+AA SALFGF+LGFPVLRL Sbjct: 121 IVVGFAGLLDLGYVGFYAVGAYTYALCNQYFGLTFWECVPLAAAASALFGFLLGFPVLRL 180 Query: 181 RGDYLAIVTLGFGEIIRLLLNNMTSLTGGPDGVSGIPKPTVFGIEMARNASVEGGTTFHD 240 RGDYLAIVTLGFGEIIRLLLNNMTS+TGGPDGVSGIPKPTVFG+ MARN EGGTTFH Sbjct: 181 RGDYLAIVTLGFGEIIRLLLNNMTSITGGPDGVSGIPKPTVFGLVMARNPVTEGGTTFHQ 240 Query: 241 MLGLTYQGGHMVIFLYFVALLLVLFTYFVTSRLIRMPMGRAWEALRDDEIACRSLGINPT 300 + GL+YQGGHMVIFLYF+ALL+VLFTYFVTSRL+RMPMGRAWEALR+DEIACRSLGINPT Sbjct: 241 LFGLSYQGGHMVIFLYFLALLMVLFTYFVTSRLLRMPMGRAWEALREDEIACRSLGINPT 300 Query: 301 RIKLSAFTLGAAFAGLAGSFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAA 360 ++KLSAFTLGAAFAGLAGSFFAARQGLV PESFTFIESALILAIVVLGGMGSQLGVILAA Sbjct: 301 KVKLSAFTLGAAFAGLAGSFFAARQGLVTPESFTFIESALILAIVVLGGMGSQLGVILAA 360 Query: 361 ILLTILPEVARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELPR 408 ILLT+LPE+ARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELP+ Sbjct: 361 ILLTVLPELARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELPQ 408 >Q0K8G5.1 Q0K8G5_CUPNH ABC-type transporter, permease component: HAAT family Length = 427 Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/405 (83%), Positives = 367/405 (90%) Query: 4 TLKNAVAAAILTAILTTPMLGLQLQLEGYRVVLNAHWTPVLIAVLVVFVFQLIKPALTRS 63 +LKNA+ AA++TAILT P+LGLQL+LEGY+VVL HW PV IAV VF+FQL KP L+R+ Sbjct: 23 SLKNAITAAVMTAILTIPILGLQLKLEGYKVVLEPHWRPVWIAVAAVFLFQLFKPLLSRA 82 Query: 64 TRKIRLPALPQLQPRQQRYALLFLFAIALVWPFFGSRGNVDVVTLALIYVILGLGLNIVV 123 +RLPA+PQL RQQR A+ L A+ LVWPFFGSRG VDV TLALIYVILGLGLNIVV Sbjct: 83 GSAVRLPAVPQLGARQQRAAVWMLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVV 142 Query: 124 GFAGLLDLGYVGFYAVGGYTYALLNQYFGFTFWECLPIAAGMSALFGFILGFPVLRLRGD 183 G+AGLLDLGYVGFYA+GGYTYALLNQYFG FWECLPIAA MSA FGF+LGFPVLRLRGD Sbjct: 143 GYAGLLDLGYVGFYAIGGYTYALLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGD 202 Query: 184 YLAIVTLGFGEIIRLLLNNMTSLTGGPDGVSGIPKPTVFGIEMARNASVEGGTTFHDMLG 243 YLAIVTLGFGEIIRLL NN+TSLTGGPDGVSGIPKPTVFGIEMAR+ASVEG TFHD+LG Sbjct: 203 YLAIVTLGFGEIIRLLANNLTSLTGGPDGVSGIPKPTVFGIEMARSASVEGAKTFHDLLG 262 Query: 244 LTYQGGHMVIFLYFVALLLVLFTYFVTSRLIRMPMGRAWEALRDDEIACRSLGINPTRIK 303 Y G HMVIFLY +ALLLV FT FVTSRLIRMPMGRAWEALRDDEIACRSLG+NPTRIK Sbjct: 263 WDYSGQHMVIFLYLLALLLVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIK 322 Query: 304 LSAFTLGAAFAGLAGSFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL 363 LSAFTLGA+FAG+ G+FFAARQGLVNPESFTFIESALILA+VVLGGMGSQLGVILAAILL Sbjct: 323 LSAFTLGASFAGIGGAFFAARQGLVNPESFTFIESALILAVVVLGGMGSQLGVILAAILL 382 Query: 364 TILPEVARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELPR 408 T+LPEVAR FAEYRMLIFGLVMVLMMMWRPQGLLPA+RPHVELP+ Sbjct: 383 TVLPEVARGFAEYRMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427 >B3R126.1 B3R126_CUPTR High-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) Length = 427 Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/405 (83%), Positives = 369/405 (91%) Query: 4 TLKNAVAAAILTAILTTPMLGLQLQLEGYRVVLNAHWTPVLIAVLVVFVFQLIKPALTRS 63 +LKNA+ AA++TAILT P+LGLQL+LEGY+VVL HW PV +AV VF+FQL KP LTR+ Sbjct: 23 SLKNAITAAVMTAILTIPILGLQLKLEGYKVVLEPHWRPVWLAVAAVFLFQLFKPVLTRA 82 Query: 64 TRKIRLPALPQLQPRQQRYALLFLFAIALVWPFFGSRGNVDVVTLALIYVILGLGLNIVV 123 +RLPALPQL +QQR A+ L A+ LVWPFFGSRG VDV TLALIYVILGLGLNIVV Sbjct: 83 GSAVRLPALPQLGAQQQRVAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVV 142 Query: 124 GFAGLLDLGYVGFYAVGGYTYALLNQYFGFTFWECLPIAAGMSALFGFILGFPVLRLRGD 183 G+AGLLDLGYVGFYAVGGYTYALLNQYFG TFWECLPIAA MSA FGF+LGFPVLRLRGD Sbjct: 143 GYAGLLDLGYVGFYAVGGYTYALLNQYFGLTFWECLPIAAAMSAGFGFLLGFPVLRLRGD 202 Query: 184 YLAIVTLGFGEIIRLLLNNMTSLTGGPDGVSGIPKPTVFGIEMARNASVEGGTTFHDMLG 243 YLAIVTLGFGEIIRLLLNN+TSLTGGPDGVSGIPKP+VFGIEMAR+ASVEG TFH+++G Sbjct: 203 YLAIVTLGFGEIIRLLLNNLTSLTGGPDGVSGIPKPSVFGIEMARSASVEGTRTFHELIG 262 Query: 244 LTYQGGHMVIFLYFVALLLVLFTYFVTSRLIRMPMGRAWEALRDDEIACRSLGINPTRIK 303 L Y HMVIFLY +ALLLV FT FVTSRLIRMPMGRAWEALR+DEIACRSLG+NPTRIK Sbjct: 263 LDYASQHMVIFLYLIALLLVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGLNPTRIK 322 Query: 304 LSAFTLGAAFAGLAGSFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL 363 LSAFTLGA+FAGL G+FFAARQGLVNPESFTFIESAL+LA+VVLGGMGSQLGVILAAILL Sbjct: 323 LSAFTLGASFAGLGGAFFAARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILL 382 Query: 364 TILPEVARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELPR 408 T+LPEVAR FAEYRMLIFGLVMVLMMMWRPQGLLPA+RPHVELPR Sbjct: 383 TVLPEVARGFAEYRMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 427 >Q2T468.1 Q2T468_BURTA High-affinity branched-chain amino acid transport system permease protein Length = 423 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/405 (79%), Positives = 362/405 (89%) Query: 4 TLKNAVAAAILTAILTTPMLGLQLQLEGYRVVLNAHWTPVLIAVLVVFVFQLIKPALTRS 63 +LK+AV AA+LTAILT P+LGLQL+L+GY+VVL AHW PV IAV VF+FQL KPAL R+ Sbjct: 19 SLKHAVTAAVLTAILTVPILGLQLKLDGYQVVLEAHWRPVWIAVAAVFLFQLFKPALLRA 78 Query: 64 TRKIRLPALPQLQPRQQRYALLFLFAIALVWPFFGSRGNVDVVTLALIYVILGLGLNIVV 123 +R+PA+ L R+QR + L A+ VWPF GSRG +D+ TLALIYVILGLGLNIVV Sbjct: 79 KAAVRMPAIAPLGAREQRAIVWALVALGFVWPFIGSRGAIDIATLALIYVILGLGLNIVV 138 Query: 124 GFAGLLDLGYVGFYAVGGYTYALLNQYFGFTFWECLPIAAGMSALFGFILGFPVLRLRGD 183 GFAGLLDLGYVGFYAVGGYTYALLNQYFG TFWECLP++A SA FGF+LGFPVLRLRGD Sbjct: 139 GFAGLLDLGYVGFYAVGGYTYALLNQYFGLTFWECLPLSALASATFGFLLGFPVLRLRGD 198 Query: 184 YLAIVTLGFGEIIRLLLNNMTSLTGGPDGVSGIPKPTVFGIEMARNASVEGGTTFHDMLG 243 YLAIVTLGFGEIIRLL NN+TS+TGGPDG+S IPKPTVFG EMAR+ASVEG TFH+++G Sbjct: 199 YLAIVTLGFGEIIRLLANNLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIG 258 Query: 244 LTYQGGHMVIFLYFVALLLVLFTYFVTSRLIRMPMGRAWEALRDDEIACRSLGINPTRIK 303 + Y G H+VIFLY +AL+LV FT FVTSRLIRMPMGRAWEALRDDEIACRSLG+NPTRIK Sbjct: 259 IEYSGKHVVIFLYLIALVLVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIK 318 Query: 304 LSAFTLGAAFAGLAGSFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL 363 LSAFTLGA+FAG+ G+FFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL Sbjct: 319 LSAFTLGASFAGIGGAFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL 378 Query: 364 TILPEVARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELPR 408 T+LPEVAR FAEYRML+FGLVMVLMMMWRPQGLLPA+RPHVELP+ Sbjct: 379 TVLPEVARGFAEYRMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423 >Q3JGL2.1 Q3JGL2_BURP1 High-affinity branched-chain amino acid transport system permease protein Length = 423 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/405 (81%), Positives = 364/405 (89%) Query: 4 TLKNAVAAAILTAILTTPMLGLQLQLEGYRVVLNAHWTPVLIAVLVVFVFQLIKPALTRS 63 +LK+AV AA+LTAILT P+LGLQL+L+GY+VVL AHW PV IAV VF+FQL KPAL R+ Sbjct: 19 SLKHAVTAAVLTAILTVPILGLQLKLDGYQVVLEAHWRPVWIAVAAVFLFQLFKPALMRA 78 Query: 64 TRKIRLPALPQLQPRQQRYALLFLFAIALVWPFFGSRGNVDVVTLALIYVILGLGLNIVV 123 +RLPA P L R+QR + L A+ VWPFFGSRG VDV TLALIYVILGLGLNIVV Sbjct: 79 KAAVRLPAAPPLGVREQRAIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVV 138 Query: 124 GFAGLLDLGYVGFYAVGGYTYALLNQYFGFTFWECLPIAAGMSALFGFILGFPVLRLRGD 183 GFAGLLDLGYVGFYAVGGYTYALLNQYFG +FWECLP++A SA FGF+LGFPVLRLRGD Sbjct: 139 GFAGLLDLGYVGFYAVGGYTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGD 198 Query: 184 YLAIVTLGFGEIIRLLLNNMTSLTGGPDGVSGIPKPTVFGIEMARNASVEGGTTFHDMLG 243 YLAIVTLGFGEIIRLL NN+TS+TGGPDG+SGIPKPTVFG EMAR+ASVEG TFH+++G Sbjct: 199 YLAIVTLGFGEIIRLLANNLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVG 258 Query: 244 LTYQGGHMVIFLYFVALLLVLFTYFVTSRLIRMPMGRAWEALRDDEIACRSLGINPTRIK 303 L Y G H+VIFLY +AL+LV FT FVTSRLIRMPMGRAWEALRDDEIACRSLG+NPTRIK Sbjct: 259 LEYSGEHVVIFLYLIALVLVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIK 318 Query: 304 LSAFTLGAAFAGLAGSFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL 363 LSAFTLGA+FAG+ G+FFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL Sbjct: 319 LSAFTLGASFAGIGGAFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILL 378 Query: 364 TILPEVARSFAEYRMLIFGLVMVLMMMWRPQGLLPATRPHVELPR 408 T+LPEVAR FAEYRMLIFGLVMVLMMMWRPQGLLPA+RPHVELP+ Sbjct: 379 TLLPEVARGFAEYRMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423