BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0112.p (308 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQR5.1 D8IQR5_HERSS ABC-type branched-chain aminoacid transpor... 558 e-157 Q0K8G4.1 Q0K8G4_CUPNH ABC-type transporter, permease component: ... 542 e-152 Q46YV3.1 Q46YV3_CUPPJ Inner-membrane translocator 540 e-151 B3R127.1 B3R127_CUPTR High-affinity branched-chain amino acid tr... 540 e-151 Q1LKH0.1 Q1LKH0_RALME Leucine/isoleucine/valine transporter subu... 535 e-150 >D8IQR5.1 D8IQR5_HERSS ABC-type branched-chain aminoacid transport system, permease component protein Length = 308 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 294/308 (95%), Positives = 304/308 (98%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYM+ SY+GLVTLTA Sbjct: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIASYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IGVQ+GYPLPLLLG ALIVSV+VTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGVQSGYPLPLLLGGALIVSVLVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RDMSVPVLISGA+EFQMGSDFTVTIPYSRM+IVGVTL+LMV LTLFIARSRM Sbjct: 121 YVQIGQGARDMSVPVLISGALEFQMGSDFTVTIPYSRMVIVGVTLVLMVALTLFIARSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDMGMANLLGIDTN+VISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI Sbjct: 181 GRACRACAEDMGMANLLGIDTNKVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLP+EYKDVVSF LLVLILLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPSEYKDVVSFGLLVLILLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >Q0K8G4.1 Q0K8G4_CUPNH ABC-type transporter, permease component: HAAT family Length = 308 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/308 (89%), Positives = 300/308 (97%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IG QAGYPLPL+LGAAL+VSV+VTG+YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGAQAGYPLPLVLGAALLVSVLVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVPVLISGAIEFQMGSDFTVT+PYSR++IVGVTL+LM+ LTLFI RSRM Sbjct: 121 YVQIGQGARDVSVPVLISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGRSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTN+VISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFA+GY+PAEYKDVV+F+LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >Q46YV3.1 Q46YV3_CUPPJ Inner-membrane translocator Length = 308 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/308 (89%), Positives = 298/308 (96%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IGVQAGYPLPL+LGAAL+VSVV+TG YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGVQAGYPLPLVLGAALLVSVVITGCYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVP+LISGAIEFQMGSDFTVT+PYSR++IVGVTL+LM+ LTLFI SRM Sbjct: 121 YVQIGQGARDVSVPILISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGHSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTNRVISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGL ETFA+GY+PAEYKDVV+F+LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLVETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >B3R127.1 B3R127_CUPTR High-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) Length = 308 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/308 (89%), Positives = 298/308 (96%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IG QAGYPLPL+LGAAL+VSV+VTG+YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGAQAGYPLPLVLGAALLVSVMVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVPVLISGAIEFQMG DFTVT+PYSR++IVGVTL LMV LTLFI RSRM Sbjct: 121 YVQIGQGARDVSVPVLISGAIEFQMGGDFTVTVPYSRLLIVGVTLALMVALTLFIGRSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTN+VISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFA+GY+PAEYKDVV+F+LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >Q1LKH0.1 Q1LKH0_RALME Leucine/isoleucine/valine transporter subunit, membrane component of ABC superfamily Length = 308 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/308 (89%), Positives = 295/308 (95%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IG QAGYPLPL+LGAALIVSV VTG YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGAQAGYPLPLVLGAALIVSVAVTGCYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVP+LISGAIEFQMG DFTVT+PYSR++IVGVTL+LM+ LTLFI SRM Sbjct: 121 YVQIGQGARDVSVPILISGAIEFQMGGDFTVTVPYSRLLIVGVTLVLMIVLTLFIGHSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTNRVISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFA+GY+PAEYKDVV+F LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFGLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308