BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0092.p (259 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITV2.1 D8ITV2_HERSS ABC-type glutamine transport system, perip... 435 e-120 D4DWZ1.1 D4DWZ1_SEROD Glutamine ABC superfamily ATP binding cass... 380 e-104 C4U7B5.1 C4U7B5_YERAL Amino acid-binding protein 379 e-103 C4SWI2.1 C4SWI2_YERIN Amino acid-binding protein 377 e-103 C4UT19.1 C4UT19_YERRO Amino acid-binding protein 377 e-103 >D8ITV2.1 D8ITV2_HERSS ABC-type glutamine transport system, periplasmic component protein Length = 259 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 219/259 (84%), Positives = 240/259 (92%) Query: 1 MSLKKLVLLAGSVLALSLTAVSAQAADQTYVVGAGGTYRPFEFETPKKELVGFDIDIIKA 60 MSLKKL+ A S LALS A +A AADQTYVVGAGGTYRPFEFETPKKELVGFDID+IKA Sbjct: 1 MSLKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKA 60 Query: 61 IAKASGFQIKLVSTPWEGIFATLGQGDRDIIISGITITEKRAQMVDFSLPYFPAEQVIIT 120 I++AS F+I+LVSTPWEGIFATLGQGDRDIIISGITIT+KRAQMVDFSLPYFPAEQVIIT Sbjct: 61 ISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIIT 120 Query: 121 GAGSKVAALADLKKLQVGVVNSTAGDIILSEEVGKSSTAIHRFDNTPLMLEELYRGGVDA 180 A +K+ +L+DLKK QV VVNSTAGDI++SEE+GK+STAIHRFDNT LMLEELYRGGVDA Sbjct: 121 NADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDA 180 Query: 181 AIGDVGVIKFYIKSHPEKQFKVVGDAKFTRQYFGIAVKKGNKELQDKINAGLKKIVADGT 240 A+GDVGVIKFYIKSHPEK+FKVVGD+KF RQYFGIAVKKGNKEL DKINAGLKKIVADGT Sbjct: 181 AVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGT 240 Query: 241 YAKIYKEWFDANVPTLPLQ 259 YAKIYK WFD +VPTLPL+ Sbjct: 241 YAKIYKTWFDGDVPTLPLK 259 >D4DWZ1.1 D4DWZ1_SEROD Glutamine ABC superfamily ATP binding cassette transporter, binding protein Length = 256 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/257 (72%), Positives = 217/257 (84%), Gaps = 2/257 (0%) Query: 3 LKKLVLLAGSVLALSLTAVSAQAADQTYVVGAGGTYRPFEFETPKKELVGFDIDIIKAIA 62 K+LVL+ G+ LA SL+A SA A+ TYVVG+GGTYRPFEFE K+L GFDIDIIKA+A Sbjct: 2 FKRLVLI-GACLAASLSAGSA-VAETTYVVGSGGTYRPFEFENSSKQLEGFDIDIIKAVA 59 Query: 63 KASGFQIKLVSTPWEGIFATLGQGDRDIIISGITITEKRAQMVDFSLPYFPAEQVIITGA 122 KA GFQIKLV+TPWEGIFATL GDRDIIISGITIT+KR QMVDFS PYFPAEQ I+ Sbjct: 60 KAEGFQIKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQMVDFSAPYFPAEQAIVVPK 119 Query: 123 GSKVAALADLKKLQVGVVNSTAGDIILSEEVGKSSTAIHRFDNTPLMLEELYRGGVDAAI 182 S V ++A LK L+VGVVNS+ GDI++S+ +GK+STAI RFDNTPLML+EL+ G+ AA+ Sbjct: 120 TSTVDSIAALKSLKVGVVNSSTGDIVVSDVLGKNSTAIKRFDNTPLMLQELFEDGISAAV 179 Query: 183 GDVGVIKFYIKSHPEKQFKVVGDAKFTRQYFGIAVKKGNKELQDKINAGLKKIVADGTYA 242 GDVGV KFYIK+HPEKQFK+V DAKF RQYFGIAV KGN EL+D+INAGLKKIVADGTYA Sbjct: 180 GDVGVAKFYIKTHPEKQFKLVTDAKFQRQYFGIAVAKGNVELRDRINAGLKKIVADGTYA 239 Query: 243 KIYKEWFDANVPTLPLQ 259 IY+ WFD+NVPTLP + Sbjct: 240 NIYRNWFDSNVPTLPAE 256 >C4U7B5.1 C4U7B5_YERAL Amino acid-binding protein Length = 262 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/253 (71%), Positives = 214/253 (84%) Query: 5 KLVLLAGSVLALSLTAVSAQAADQTYVVGAGGTYRPFEFETPKKELVGFDIDIIKAIAKA 64 K ++L G+ LA L+A + AA+ TYVVG+GGTYRPFE+E +K+L GFDIDIIKAIAKA Sbjct: 3 KRLILVGTCLAAVLSASATMAAEPTYVVGSGGTYRPFEYENSQKQLEGFDIDIIKAIAKA 62 Query: 65 SGFQIKLVSTPWEGIFATLGQGDRDIIISGITITEKRAQMVDFSLPYFPAEQVIITGAGS 124 GFQ+KLV+TPWEGIFATLG GDRDIIISGITIT+KR QMVDFS PYFPAEQ I+ GS Sbjct: 63 DGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQMVDFSDPYFPAEQTIVVAKGS 122 Query: 125 KVAALADLKKLQVGVVNSTAGDIILSEEVGKSSTAIHRFDNTPLMLEELYRGGVDAAIGD 184 KV ++A LK L VGVVNS+ GDI++S+ +GK+STAI RFDNTPLML+ELY G+ AA+GD Sbjct: 123 KVDSIAALKNLNVGVVNSSTGDIVVSDVLGKNSTAIKRFDNTPLMLQELYEDGIAAAVGD 182 Query: 185 VGVIKFYIKSHPEKQFKVVGDAKFTRQYFGIAVKKGNKELQDKINAGLKKIVADGTYAKI 244 VGV KFY+K+HPEK F++V D KF RQYFGIAV KGN EL++KIN GL+KIVADGTYAKI Sbjct: 183 VGVAKFYLKTHPEKAFELVSDTKFERQYFGIAVAKGNDELRNKINNGLQKIVADGTYAKI 242 Query: 245 YKEWFDANVPTLP 257 Y++WFDA VPTLP Sbjct: 243 YEKWFDAQVPTLP 255 >C4SWI2.1 C4SWI2_YERIN Amino acid-binding protein Length = 262 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 179/253 (70%), Positives = 214/253 (84%) Query: 5 KLVLLAGSVLALSLTAVSAQAADQTYVVGAGGTYRPFEFETPKKELVGFDIDIIKAIAKA 64 K ++L G+ LA L+A SA A + TYVVG+GGTYRPFE+E +K+L GFDIDIIKAI KA Sbjct: 3 KRLMLVGTCLAAVLSAGSAMAVEPTYVVGSGGTYRPFEYENSQKQLEGFDIDIIKAIGKA 62 Query: 65 SGFQIKLVSTPWEGIFATLGQGDRDIIISGITITEKRAQMVDFSLPYFPAEQVIITGAGS 124 GFQ+KLV+TPWEGIFATLG GDRDIIISGITIT+KR QMVDFS PYFPAEQ I+ GS Sbjct: 63 EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQMVDFSDPYFPAEQTIVVAKGS 122 Query: 125 KVAALADLKKLQVGVVNSTAGDIILSEEVGKSSTAIHRFDNTPLMLEELYRGGVDAAIGD 184 KV ++A LK L VGVVNS+ GDI++S+ +GK+STAI RFDNTPLML+ELY G+ AA+GD Sbjct: 123 KVNSIAALKDLNVGVVNSSTGDIVVSDVLGKNSTAIKRFDNTPLMLQELYEDGIAAAVGD 182 Query: 185 VGVIKFYIKSHPEKQFKVVGDAKFTRQYFGIAVKKGNKELQDKINAGLKKIVADGTYAKI 244 VGV KFY+K+HPEK F++V D KF RQYFGIAV KGN+EL+ KIN+GL+KI+ADGTYAKI Sbjct: 183 VGVAKFYLKTHPEKAFELVSDTKFERQYFGIAVAKGNEELRTKINSGLQKIIADGTYAKI 242 Query: 245 YKEWFDANVPTLP 257 Y++WFDA VPTLP Sbjct: 243 YEKWFDAQVPTLP 255 >C4UT19.1 C4UT19_YERRO Amino acid-binding protein Length = 262 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 181/253 (71%), Positives = 214/253 (84%) Query: 5 KLVLLAGSVLALSLTAVSAQAADQTYVVGAGGTYRPFEFETPKKELVGFDIDIIKAIAKA 64 K ++L G+ LA L+A SA AA+ TYVVG+G TYRPFE+E +K+L GFDIDIIKAI KA Sbjct: 3 KRLMLVGTCLAAVLSASSAIAAEPTYVVGSGATYRPFEYENSQKQLEGFDIDIIKAIGKA 62 Query: 65 SGFQIKLVSTPWEGIFATLGQGDRDIIISGITITEKRAQMVDFSLPYFPAEQVIITGAGS 124 GFQIKLV+TPWEGIFATLG GDRDIIISGITIT+KR QMVDFS PYFPAEQ I+ GS Sbjct: 63 EGFQIKLVNTPWEGIFATLGSGDRDIIISGITITDKRQQMVDFSDPYFPAEQTIVVAKGS 122 Query: 125 KVAALADLKKLQVGVVNSTAGDIILSEEVGKSSTAIHRFDNTPLMLEELYRGGVDAAIGD 184 KV ++A LK L VGVVNS+ GDI++S +GK+STAI RFDNTPLML+ELY G+ AA+GD Sbjct: 123 KVDSIAALKDLNVGVVNSSTGDIVVSNVLGKNSTAIKRFDNTPLMLQELYEDGIAAAVGD 182 Query: 185 VGVIKFYIKSHPEKQFKVVGDAKFTRQYFGIAVKKGNKELQDKINAGLKKIVADGTYAKI 244 VGV KFY+K+HPEK F++V D KF RQYFGIAV KGN+EL++KIN+GL+KIVADGTYAKI Sbjct: 183 VGVAKFYLKTHPEKAFELVSDDKFERQYFGIAVAKGNEELRNKINSGLQKIVADGTYAKI 242 Query: 245 YKEWFDANVPTLP 257 Y++WFDA VPTLP Sbjct: 243 YEKWFDAQVPTLP 255