BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0054.p (280 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6SVY4.1 A6SVY4_JANMA Sulfonate/nitrate transport system permeas... 390 e-107 D8IQQ2.1 D8IQQ2_HERSS ABC-type alkanesulfonates transport system... 389 e-106 Q0K9I1.1 Q0K9I1_CUPNH ABC-type transporter, permease component: ... 366 2e-99 C5CNW8.1 C5CNW8_VARPS Binding-protein-dependent transport system... 363 1e-98 E6V2Q1.1 E6V2Q1_VARPD Binding-protein-dependent transport system... 360 1e-97 >A6SVY4.1 A6SVY4_JANMA Sulfonate/nitrate transport system permease protein Length = 276 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/273 (79%), Positives = 243/273 (89%), Gaps = 3/273 (1%) Query: 8 PTVDTPRKIAAAKSSGSGSSNGFGATQLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWA 67 PT+ TP AA S +S G +L+ W +PV LI VWQIA+QLGWLSSRILPEP+A Sbjct: 6 PTLATPGAAAAKAPSTWRAS---GLKKLVPWIVPVLLISVWQIASQLGWLSSRILPEPFA 62 Query: 68 VLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMV 127 V +AAW L++SGELWTH+ VS RA + FAVGGGLGLLLGLLTGTF+ AE LLDTTLQM+ Sbjct: 63 VAKAAWELALSGELWTHVKVSLWRATTSFAVGGGLGLLLGLLTGTFKTAETLLDTTLQMI 122 Query: 128 RNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLS 187 RNIPALALIPL+ILWFGI+ETSK+FLV+VGVFFP+YLNTFHGIRSVDKGLIEMAKSYGLS Sbjct: 123 RNIPALALIPLVILWFGIEETSKIFLVAVGVFFPVYLNTFHGIRSVDKGLIEMAKSYGLS 182 Query: 188 GWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVV 247 GW LYRDVILPGALPSILVGVRF+LGLVWVLLIVAETISAQ+GIGYMTMNAREFLQTDVV Sbjct: 183 GWSLYRDVILPGALPSILVGVRFSLGLVWVLLIVAETISAQSGIGYMTMNAREFLQTDVV 242 Query: 248 LVGILLYALLGKLADVLARSLEKFWLRWHPGYQ 280 LVGILLYALLGKLADV++R+LE +WLRWHPGY+ Sbjct: 243 LVGILLYALLGKLADVVSRTLEGYWLRWHPGYR 275 >D8IQQ2.1 D8IQQ2_HERSS ABC-type alkanesulfonates transport system, permease component protein Length = 279 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/282 (77%), Positives = 244/282 (86%), Gaps = 8/282 (2%) Query: 3 TSIASPT---VDTPRKIAAAKSSGSGSSNGFGATQL-LSWALPVGLIVVWQIAAQLGWLS 58 TS ++P V P++ A K++ F + + W LP+ L+V W++AAQ GWLS Sbjct: 2 TSASNPVAGRVAGPQEQAKPKAA----RKSFQPSHAWIGWLLPLLLLVWWEVAAQAGWLS 57 Query: 59 SRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEV 118 SRILPEP AVL+AAW LS SGELW HL VS+GRAASGFAVG GLGL+LGLL+G+ R AE+ Sbjct: 58 SRILPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAEL 117 Query: 119 LLDTTLQMVRNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLI 178 LLDTTLQMVRNIPALALIPL+ILWFGIDET+KLFLVSVGVFFP+YLNTFHGIRSVD+GLI Sbjct: 118 LLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLI 177 Query: 179 EMAKSYGLSGWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNA 238 EMAKSYGLSGWPLYRDVILPGALP+ILVG+RFALGLVWVLLIVAETISAQAGIGYMTMNA Sbjct: 178 EMAKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNA 237 Query: 239 REFLQTDVVLVGILLYALLGKLADVLARSLEKFWLRWHPGYQ 280 REFLQTDVVLVGILLYALLGKLAD AR LE+FWLRWHPGYQ Sbjct: 238 REFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHPGYQ 279 >Q0K9I1.1 Q0K9I1_CUPNH ABC-type transporter, permease component: TauT family Length = 267 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 204/279 (73%), Positives = 233/279 (83%), Gaps = 15/279 (5%) Query: 1 MSTSIASPTVDTPRKIAAAKSSGSGSSNGFGATQLLSWALPVGLIVVWQIAAQLGWLSSR 60 M+ + P PR +A A L W +PV LIVVWQ+A+Q GWLSSR Sbjct: 1 MNAPLLQPLRQGPRALARA---------------LAPWIVPVLLIVVWQLASQNGWLSSR 45 Query: 61 ILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLL 120 +LP P AV++AAW L+ SG+LW H+GVST RA GFA+GGGLGLLLGLLTGTFR A LL Sbjct: 46 VLPAPLAVVQAAWELARSGDLWKHVGVSTWRALVGFAIGGGLGLLLGLLTGTFRTAATLL 105 Query: 121 DTTLQMVRNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEM 180 D++LQMVRNIPALALIPL+ILWFGIDET+KLFLVS+GVFFP+YLNT+HGIRSVD GL+EM Sbjct: 106 DSSLQMVRNIPALALIPLVILWFGIDETAKLFLVSLGVFFPVYLNTYHGIRSVDTGLVEM 165 Query: 181 AKSYGLSGWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNARE 240 A+SYGLSGW LYR+VILPGALP ILVGVRFALGL+WV+LIVAETISAQ+GIGYMTMNARE Sbjct: 166 ARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWVVLIVAETISAQSGIGYMTMNARE 225 Query: 241 FLQTDVVLVGILLYALLGKLADVLARSLEKFWLRWHPGY 279 FLQTDVVLVGILLYALLGKLAD L+R LE++WLRWHPGY Sbjct: 226 FLQTDVVLVGILLYALLGKLADWLSRGLERYWLRWHPGY 264 >C5CNW8.1 C5CNW8_VARPS Binding-protein-dependent transport systems inner membrane component Length = 284 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 192/273 (70%), Positives = 234/273 (85%), Gaps = 3/273 (1%) Query: 11 DTPRKIAAAKSSGSGSSNGFGAT---QLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWA 67 + P ++++ + G+ FGA+ +L+ W +PVGLIV WQIA+ LGWLS+R+LP P Sbjct: 7 ELPAVASSSEETTGGAFKAFGASVAVRLVPWLVPVGLIVFWQIASSLGWLSTRVLPAPVD 66 Query: 68 VLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMV 127 V++AAW L+VSGELWTH+ VS GRA +G A+GGG GL+LGLLTG+ + E LLD+T+QMV Sbjct: 67 VVKAAWALAVSGELWTHVKVSAGRALAGLAIGGGTGLVLGLLTGSVKFFETLLDSTIQMV 126 Query: 128 RNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLS 187 RNIPALALIPL+ILWFGIDE++KLFL+SV VFFPIYLNTFHGIR+VD LIEM ++YGLS Sbjct: 127 RNIPALALIPLVILWFGIDESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLS 186 Query: 188 GWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVV 247 W LYR+VILPGAL SILVG+RF+LGL+WV+LIVAETISAQAGIGY+TMNAREFLQTD+V Sbjct: 187 RWQLYREVILPGALSSILVGLRFSLGLMWVILIVAETISAQAGIGYLTMNAREFLQTDIV 246 Query: 248 LVGILLYALLGKLADVLARSLEKFWLRWHPGYQ 280 LVGILLYALLGKLAD+ AR LE++WLRWHPGYQ Sbjct: 247 LVGILLYALLGKLADLFARGLEQWWLRWHPGYQ 279 >E6V2Q1.1 E6V2Q1_VARPD Binding-protein-dependent transport systems inner membrane component Length = 283 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 193/268 (72%), Positives = 230/268 (85%), Gaps = 6/268 (2%) Query: 19 AKSSGSGSSNGFGAT------QLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRAA 72 + G+G+ N F A +L+ W +PVGLIV WQIA+ LGWLS+R+LP P V++AA Sbjct: 12 STDEGAGTGNAFKAFGLNVAGRLIPWLVPVGLIVFWQIASSLGWLSTRVLPAPVDVVKAA 71 Query: 73 WNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIPA 132 W+L+VSGELWTH+ VS GRA +G A+GGG GL LGLLTG+ + AE LLD+T+QMVRNIPA Sbjct: 72 WSLTVSGELWTHVKVSAGRALAGLAIGGGAGLALGLLTGSVKFAETLLDSTIQMVRNIPA 131 Query: 133 LALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPLY 192 LALIPL+ILWFGIDE++KLFL+SV VFFPIYLNTFHGIR+VD LIEM ++YGLS W LY Sbjct: 132 LALIPLVILWFGIDESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLY 191 Query: 193 RDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGIL 252 R+VILPGAL SILVG+RF+LGL+WV+LIVAETISAQAGIGY+TMNAREFLQTD+VLVGIL Sbjct: 192 REVILPGALSSILVGLRFSLGLMWVILIVAETISAQAGIGYLTMNAREFLQTDIVLVGIL 251 Query: 253 LYALLGKLADVLARSLEKFWLRWHPGYQ 280 LYALLGKLAD+ AR LE++WLRWHPGYQ Sbjct: 252 LYALLGKLADLFARGLEQWWLRWHPGYQ 279