BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0052.p (322 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQQ0.1 D8IQQ0_HERSS ABC-type alkanesulfonates transport system... 513 e-143 B2JPS9.1 B2JPS9_BURP8 Aliphatic sulfonates family ABC transporte... 434 e-120 B2T7Y5.1 B2T7Y5_BURPP Aliphatic sulfonates family ABC transporte... 431 e-119 B5WN42.1 B5WN42_9BURK Aliphatic sulfonates family ABC transporte... 428 e-118 D5NEA0.1 D5NEA0_9BURK Aliphatic sulfonates family ABC transporte... 426 e-117 >D8IQQ0.1 D8IQQ0_HERSS ABC-type alkanesulfonates transport system, periplasmic component protein Length = 327 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 255/328 (77%), Positives = 286/328 (87%), Gaps = 7/328 (2%) Query: 1 MSAQQ----RSARRRTLGLLTTLAIAA--AGLGVSNFAAAQSRQVLRIGYQKAASTLVLL 54 MSA + ARRR + L+ +A+ A LG S A Q ++LRIGYQKAA+TLVLL Sbjct: 1 MSANKNKTVHQARRRAIQRLSAIALGALTIALGASPVQA-QETKLLRIGYQKAANTLVLL 59 Query: 55 KAHGSLEKRLQAQGVEVKWAEFTAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGANFVYT 114 KAHG+LEKRLQ GVEVKWAEF AGPQLLEALNVGSVDFGYVGEAPPVFAQAAGA+FVYT Sbjct: 60 KAHGTLEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYT 119 Query: 115 AYEIPTPDAEGLLVQKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLSYSDIQPV 174 AYEIPTPDAEGLLVQK+SPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGL YSDIQPV Sbjct: 120 AYEIPTPDAEGLLVQKNSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPV 179 Query: 175 YLAPADARAAFEKGAIDAWAIWDPFQAAAEKQIGARRLATGVGAVSHHQFFLSARPFAEK 234 YLAPADARAAFE+GA+DAWAIWDPFQAAAEKQ+GARRLATGVGAV+HHQFFLSARPFA K Sbjct: 180 YLAPADARAAFERGAVDAWAIWDPFQAAAEKQVGARRLATGVGAVNHHQFFLSARPFAAK 239 Query: 235 NAAIIKVLLEEITKEGQWIRANTKEAATQLAPIQGLDTDVIEISLKRYEHIFRPIDAKVL 294 N + K+LLEEI++EG+W+R +T +AA QLAPIQGLD D+IE LKRY H+++P+DA+VL Sbjct: 240 NPQVEKILLEEISREGEWVRTHTAQAAAQLAPIQGLDADIIETGLKRYAHVYKPVDAQVL 299 Query: 295 EEQQRIADAFFELKLIPKKLSVKDAVLK 322 EQQ+IADAF+ELKLIPK L V DAVLK Sbjct: 300 AEQQKIADAFYELKLIPKPLKVSDAVLK 327 >B2JPS9.1 B2JPS9_BURP8 Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein Length = 321 Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust. Identities = 213/319 (66%), Positives = 258/319 (80%), Gaps = 3/319 (0%) Query: 3 AQQRSARRRTLGLLTTLAIAAAGLGVSNFAAAQSRQVLRIGYQKAASTLVLLKAHGSLEK 62 +Q R RRT L T A+ A+ S+FA ++++++ RIGYQKAASTLVLLKAHG+LEK Sbjct: 2 SQHRMFTRRTF-LAGTGALLAS-TAFSSFADSRAKEI-RIGYQKAASTLVLLKAHGTLEK 58 Query: 63 RLQAQGVEVKWAEFTAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGANFVYTAYEIPTPD 122 R AQGV VKW EF AGPQLLE LNVGSVDFGYVGEAPPV AQAAGANFVYTAYEIPTP Sbjct: 59 RFAAQGVSVKWTEFPAGPQLLEGLNVGSVDFGYVGEAPPVIAQAAGANFVYTAYEIPTPQ 118 Query: 123 AEGLLVQKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLSYSDIQPVYLAPADAR 182 AEG+LV +D+PI+SVA+LKGK++AFNKGSDVHW +VA L+KAG+SY DIQPV+L PADAR Sbjct: 119 AEGILVHRDAPIQSVADLKGKRVAFNKGSDVHWFLVAALQKAGVSYPDIQPVFLPPADAR 178 Query: 183 AAFEKGAIDAWAIWDPFQAAAEKQIGARRLATGVGAVSHHQFFLSARPFAEKNAAIIKVL 242 AAFE+GAIDAWAIWDPF AA++Q AR L G G V+HHQFFLSAR FA++N ++ + Sbjct: 179 AAFERGAIDAWAIWDPFLEAAKRQSNARLLTDGTGIVNHHQFFLSARSFAQQNRGLLDAV 238 Query: 243 LEEITKEGQWIRANTKEAATQLAPIQGLDTDVIEISLKRYEHIFRPIDAKVLEEQQRIAD 302 + E+ KEG W+R + EAA QLAPIQGLD +VIE L+ Y H+++PIDA VL EQQ+IAD Sbjct: 239 VTEVGKEGAWVRGHYAEAAAQLAPIQGLDANVIEAGLRHYAHVYKPIDAGVLAEQQKIAD 298 Query: 303 AFFELKLIPKKLSVKDAVL 321 AF EL++IP K+ K+AVL Sbjct: 299 AFTELRIIPTKIVTKEAVL 317 >B2T7Y5.1 B2T7Y5_BURPP Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein Length = 328 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 213/323 (65%), Positives = 252/323 (78%), Gaps = 2/323 (0%) Query: 1 MSAQQRSARRRTL-GLLTTLAIAAAG-LGVSNFAAAQSRQVLRIGYQKAASTLVLLKAHG 58 MS ARR + G+ TLA A + S FAA + RIGYQKAA+TLVLLKAHG Sbjct: 1 MSRHPLLARRAFIAGVGATLAAATLPVISTSAFAAEAHAKEFRIGYQKAANTLVLLKAHG 60 Query: 59 SLEKRLQAQGVEVKWAEFTAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGANFVYTAYEI 118 +LEKRL GV VKW EF AGPQLLE LNVG++DFGYVGEAPPVFAQAAGANFVY AYE+ Sbjct: 61 TLEKRLAPLGVTVKWTEFAAGPQLLEGLNVGAIDFGYVGEAPPVFAQAAGANFVYVAYEV 120 Query: 119 PTPDAEGLLVQKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLSYSDIQPVYLAP 178 PTP AEG+LV +D+PIK++A+LKGKKIA NKGSDVHW +VA L+KAG+ YS+IQPVYLAP Sbjct: 121 PTPHAEGILVHRDAPIKTLADLKGKKIALNKGSDVHWFLVAALQKAGVKYSEIQPVYLAP 180 Query: 179 ADARAAFEKGAIDAWAIWDPFQAAAEKQIGARRLATGVGAVSHHQFFLSARPFAEKNAAI 238 ADARAAFE+GAIDAWAIWDPF AA++Q AR L G VSHHQFFLSAR FAE+NA + Sbjct: 181 ADARAAFERGAIDAWAIWDPFLEAAKRQSNARLLTDADGIVSHHQFFLSARSFAEQNANV 240 Query: 239 IKVLLEEITKEGQWIRANTKEAATQLAPIQGLDTDVIEISLKRYEHIFRPIDAKVLEEQQ 298 + + ++E+ KEG W+R + EAA QLAPIQGLD VIE L+ Y H+++P+DA VL EQQ Sbjct: 241 LDITMDEVGKEGAWVRGHYSEAAAQLAPIQGLDAGVIEAGLRHYAHVYKPVDANVLAEQQ 300 Query: 299 RIADAFFELKLIPKKLSVKDAVL 321 RIADAF EL++IP K+ KDA L Sbjct: 301 RIADAFSELRIIPTKIVTKDAAL 323 >B5WN42.1 B5WN42_9BURK Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein Length = 397 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/323 (64%), Positives = 251/323 (77%), Gaps = 2/323 (0%) Query: 1 MSAQQRSARRRTLGLL-TTLAIAA-AGLGVSNFAAAQSRQVLRIGYQKAASTLVLLKAHG 58 MS +RR L + TLA AA G + FAA + + LRIGYQKAASTLVLLKAHG Sbjct: 71 MSRDPLPSRRTFLANIGATLAAAALPGFSATAFAADEHAKELRIGYQKAASTLVLLKAHG 130 Query: 59 SLEKRLQAQGVEVKWAEFTAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGANFVYTAYEI 118 +LEKRL G+ VKW EF AGPQLLE LNVG++DFGYVGEAPPVFAQAAGANFVYTAYEI Sbjct: 131 TLEKRLAPLGIAVKWTEFPAGPQLLEGLNVGAIDFGYVGEAPPVFAQAAGANFVYTAYEI 190 Query: 119 PTPDAEGLLVQKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLSYSDIQPVYLAP 178 PTP AEG+LV D+PI+++A+LKGKKIA NKGSDVHW +VA L+K G+ +S++QPVYL P Sbjct: 191 PTPHAEGILVHPDAPIRTLADLKGKKIALNKGSDVHWFLVAALQKNGVKFSEVQPVYLPP 250 Query: 179 ADARAAFEKGAIDAWAIWDPFQAAAEKQIGARRLATGVGAVSHHQFFLSARPFAEKNAAI 238 ADARAAFE+GA+DAWAIWDPF AA++Q AR LA G VSHHQFFLSARPFA++N + Sbjct: 251 ADARAAFERGAVDAWAIWDPFLEAAKRQTNARLLADADGIVSHHQFFLSARPFAQQNGEV 310 Query: 239 IKVLLEEITKEGQWIRANTKEAATQLAPIQGLDTDVIEISLKRYEHIFRPIDAKVLEEQQ 298 + ++++E KEG+W+R + EAA QLAPIQGLD VIE L Y H+++P+DA VL EQQ Sbjct: 311 LAIVIDEAGKEGEWVRGHYSEAAAQLAPIQGLDASVIESGLHHYAHVYKPVDANVLAEQQ 370 Query: 299 RIADAFFELKLIPKKLSVKDAVL 321 RIAD F EL LIP K+ +DA L Sbjct: 371 RIADTFAELHLIPTKIVTRDAAL 393 >D5NEA0.1 D5NEA0_9BURK Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein Length = 328 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 210/323 (65%), Positives = 251/323 (77%), Gaps = 2/323 (0%) Query: 1 MSAQQRSARRRTL-GLLTTLAIAAAGL-GVSNFAAAQSRQVLRIGYQKAASTLVLLKAHG 58 MS RR + G+ TLA A + S FAA + RIGYQKAA+TLVLLK+HG Sbjct: 1 MSRHPLLTRRAFIAGVGATLAAATLPVVSTSVFAADAHAREFRIGYQKAANTLVLLKSHG 60 Query: 59 SLEKRLQAQGVEVKWAEFTAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGANFVYTAYEI 118 +LEKRL G+ VKW EF AGPQLLE LNVG++DFGYVGEAPPVFAQAAGANFVY AYEI Sbjct: 61 TLEKRLAPLGITVKWTEFPAGPQLLEGLNVGAIDFGYVGEAPPVFAQAAGANFVYVAYEI 120 Query: 119 PTPDAEGLLVQKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLSYSDIQPVYLAP 178 PTP AEG+LV +D+PIK++A+LKGKKIAFNKGSDVHW +VA L+K+G+ YS+IQPVYLAP Sbjct: 121 PTPHAEGILVHQDAPIKTLADLKGKKIAFNKGSDVHWFLVAALQKSGVKYSEIQPVYLAP 180 Query: 179 ADARAAFEKGAIDAWAIWDPFQAAAEKQIGARRLATGVGAVSHHQFFLSARPFAEKNAAI 238 ADARAAFE+GAIDAWAIWDPF AA++Q AR LA G G VSHHQFFLSAR FA++NA + Sbjct: 181 ADARAAFERGAIDAWAIWDPFLEAAKRQSNARLLADGEGIVSHHQFFLSARSFAQQNADV 240 Query: 239 IKVLLEEITKEGQWIRANTKEAATQLAPIQGLDTDVIEISLKRYEHIFRPIDAKVLEEQQ 298 + + ++E+ KEG W+R + EAA QLAPIQGLD VIE L+ Y HI++P+DA VL EQQ Sbjct: 241 LAITMDEVGKEGAWVRGHYSEAAAQLAPIQGLDAGVIEAGLRHYAHIYKPVDASVLAEQQ 300 Query: 299 RIADAFFELKLIPKKLSVKDAVL 321 IAD F EL +IP ++ KDA L Sbjct: 301 HIADTFAELHIIPTRIVTKDAAL 323